KEGG   Pseudoduganella armeniaca: C9I28_14835
Entry
C9I28_14835       CDS       T05378                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
masz  Pseudoduganella armeniaca
Pathway
masz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:masz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C9I28_14835 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:masz02044]
    C9I28_14835 (icmF)
Secretion system [BR:masz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C9I28_14835 (icmF)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical MMR_HSR1 SPC25 DUF2570 DUF4131
Other DBs
NCBI-ProteinID: AVR99216
UniProt: A0A2R4CHZ9
LinkDB
Position
complement(3409815..3413705)
AA seq 1296 aa
MQKTWEFLTSRRSLIVIGWLAFAATLFIAATLLQWPASVPWTVMAVALLFGAIVWLWRRY
RRRQRADQLGDMLEQQAKAPAPAPAPAPAQVDAVHRQETEVIRKRLLEAIGTIKSSKLGQ
LSGDAALYELPWYMVIGNPAAGKSTAIASSGLQFPFADSKVVHGVGGTRNCDWFFTTEGI
LLDTAGRYSVVDEDRAEWFGFLDLLKKYRKKAPINGVIIAVSIAELTRNRPEFAIELAKN
LRQRVQELTERLEVHAPVYVVFTKADLITGFNEFFQDSERAERDRVWGATLPYSQSASSE
QLLDQFDARFDELYDGLKDLSLANMSLQWRERMPPGVFTFPLEFSSVKPALRSFIATLFE
ENPYQFKPVFRGFYFTSALQEGETVSASSHRVAQRFDLQLQPPQHEELHQQQGYFLLNLF
RKVIFADKDLVAQYASPAKTRMRYAMFFAAMAFVGLALGGWSWSFMNNRQLVANVQADLD
QAIKLQQKSIDLQSRLQALEILQDRIEQLDRYEDSRPLSLGLGLYQGDVLNRKLREEYFN
GVREVMLKPVGQSLETFLAEVNNNAGQLQPMTKPVTAASGAAPAGSDSAAVNNGAMQFKD
ASPANAEDAYNALKTYLMLTDKSRAEAAHLNDQLTRFWRVWLDSNRGAMPREQMIRSAER
LISFYLAQVSDPAWPQLEGKLALVDQTRDNLRRVVRGMPARERVYADIKARAATRFPSMT
VARIVGEQDKDIVLGSYAIPGTFTRAAWEGFVQEAIKEAANHELSAADWVLKTSSNTDLT
LEGSPEQIQKSLTELYKNDYAKEWTKFVQGVTIRDLDGFGAATAAMNRLGDPQNSPITKL
VTTVYEQTSWDNPSLLDAGIQRAQRGISGWFRETILRQKPSQINVNLPSNPVQNAALPLG
PVGREFAGVARLVVNKDNSSLMRGYIDQMSKLRARLNQIKNQGDPGPGAKQLMQQTLDGS
GSELAEALKYVDEQMLVGMTDAQKNAIRPVLVRPLMQTFAVIVKPTEAEIDKVWQAQVVQ
PFSKNLALKYPFAPESKLEATNAEIGEMFGPEGAIAKFFNTTIGPLVVRRGDVLSAKTWA
DMGIHLEPSVIANFPGWVAPLSAGGVASQAAAAPGEPQTLFDVQALGATGATEFTLEIDG
QALRWRGQPQPWVKMRWPNPTGLPGARIKAITPAGNTVVLLDESGRDGLRKMIDAARRTR
RDNGVFELAWSNTGVTVTANLKIVGQVTPPPQAAVPQSGTNFKRLRLPETIIAAAPAAPA
PAPAPAPAPGAPAPAAPAPAAPAPTRGAGATVGAMP
NT seq 3891 nt   +upstreamnt  +downstreamnt
atgcaaaaaacctgggaattcctgacatcgcgccgcagcctgatcgtcatcggctggctg
gcctttgccgccaccttgttcatcgcggccaccctgctgcaatggcccgccagcgtgccg
tggacggtcatggcggtggcgctgctgttcggcgccatcgtctggctgtggcgccgctac
cgccgccgccagcgcgcggaccagctgggcgacatgctcgagcagcaggccaaggcgccg
gcgccggcgccggcgccggcgccggcccaggtcgacgcggtgcaccgccaggagacggag
gtgatccgcaagcgcctgctggaagcgatcggcaccatcaagagttccaagctgggccaa
ctgtccggcgacgcggcgctgtacgagctgccgtggtacatggtcatcggtaacccggcc
gccggcaagagcacggcgatcgccagctccggcctgcagttcccgttcgccgactcgaag
gtcgtgcacggcgtcggcggcacccgcaactgcgactggttcttcaccaccgaaggcatc
ctgctcgacacggccgggcgctactccgtggtggacgaggaccgcgccgagtggttcggc
ttcctcgacctgttgaagaagtaccgcaagaaggccccgatcaatggcgtcatcatcgcc
gtcagcatcgcggagctgacgcgcaaccgcccggaattcgccatcgagctggccaagaac
ctgcgccagcgcgtgcaggaactgaccgagcgcctcgaggtgcatgcgccggtctacgtc
gtgtttaccaaggccgacctgatcaccggcttcaacgaattcttccaggacagcgaacgc
gccgagcgcgatcgcgtctggggcgccaccctgccgtacagccagagcgccagctccgag
cagctgctggaccagttcgacgcccgcttcgacgagctgtacgacggcctgaaggacctg
tcgctggcgaacatgtcgctgcaatggcgcgagcgcatgccgcccggcgtgttcacgttc
ccgctcgaattctcgtcggtcaagccggcgctgcgctcgttcatcgccacgctgttcgag
gagaacccgtaccagttcaagcccgtgttccgcggcttctatttcaccagcgcgctgcag
gaaggcgagaccgtgtcggcctcgtcgcaccgcgtggcgcagcgcttcgacctgcagctg
caaccgccgcagcatgaggaactgcaccagcagcagggctatttcctgctgaacctgttc
cgcaaggtgatcttcgccgacaaggacctggtggcgcagtacgccagcccggccaagacc
cgcatgcgctacgcgatgttcttcgcggcgatggccttcgtcggcctggcgctgggcggc
tggagctggtcgttcatgaacaaccgccagctggtggccaacgtgcaggcggacctggac
caggccatcaagctgcagcagaagagcatcgacctgcagtcgcgcctgcaggcactggag
attctgcaggaccgcatcgagcagctcgaccgctacgaggacagccggccgctgtcgctg
ggcctgggcctgtaccagggcgacgtcttgaaccgcaagctgcgcgaggaatacttcaac
ggcgtgcgcgaggtgatgctgaaacccgtcggccagtcgctcgagaccttcctggcggag
gtcaacaacaacgccggccagctgcagccgatgacgaaaccggtcaccgcggccagcggc
gcggcgcccgcgggcagcgacagcgccgccgtcaacaacggcgccatgcagttcaaggat
gcgtcgccggccaacgcggaagatgcgtacaacgcgctcaagacctacctgatgctgacc
gataagtcgcgtgccgaggccgcccacctgaacgaccagctgacccgcttctggcgcgtc
tggctggattcgaaccgcggcgcgatgccgcgcgagcagatgatccgcagcgccgagcgc
ctgatctcgttctacctggcgcaggtgtccgacccggcctggccgcagctggaaggcaag
ctggccctggtcgaccagacccgcgacaacctgcgccgcgtggtgcgcggcatgccggcg
cgcgagcgcgtgtatgccgacatcaaggcgcgcgccgccacccgcttcccgtcgatgacg
gtggcgcgcatcgtcggcgagcaggacaaggacatcgtgctgggcagctatgcgatcccg
ggcaccttcacccgcgccgcctgggaaggcttcgtgcaggaagcgatcaaggaagccgcc
aaccacgagctgtcggccgccgactgggtgctgaaaacctcgtcgaacaccgacttgacg
ctggagggcagcccggaacagatccagaagtcgctgacggagctgtacaagaacgactat
gccaaggagtggaccaagttcgtgcagggcgtgaccatccgcgacctggacggcttcggc
gccgccacggccgcgatgaaccgcctgggcgacccgcagaattcgccgatcacgaaactg
gtgacgaccgtctacgagcagacctcgtgggacaacccgtcgctgctcgacgccggcatc
cagcgcgcccagcgcggcatcagcggctggttccgcgagacgatcctgcgccagaagccg
tcgcagatcaacgtcaacctgccgagcaatccggtgcagaacgcggcgctgccgctgggc
cccgtgggccgcgagttcgccggcgtggcgcgcctggtcgtcaacaaggacaacagctcg
ctgatgcgcggctatatcgaccagatgtcgaaactgcgcgcgcgcctgaaccagatcaag
aaccagggcgacccgggtcccggcgccaagcagctgatgcagcagaccctggacggcagc
ggttccgaactggccgaggcgctgaaatacgtcgacgagcagatgctggtcgggatgacg
gatgcgcagaagaacgccatccgcccggtactggtgcgtccgctgatgcagaccttcgcc
gtcatcgtcaagccgaccgaggccgagatcgacaaagtctggcaggcgcaggtcgtgcag
cccttcagcaagaacctggcgctgaagtatccgttcgcgccggagtcgaagctggaagcg
accaatgcggaaatcggcgagatgttcggtccggaaggcgccatcgccaagttcttcaac
acgacgatcggcccgctggtggtgcgccgcggcgacgtgctgagcgccaagacctgggcc
gacatgggcatccacctggagccgtccgtgatcgccaacttccccggctgggtggcgccg
ctgtcggccggcggcgtggccagccaggccgccgccgcgccgggcgaaccgcagacgctg
ttcgacgtgcaggcgctgggcgccaccggcgcgaccgagttcacgctggagatcgacggc
caggcgctgcgctggcgcggccagccgcagccatgggtcaagatgcgctggccgaatccg
accggcctgccgggcgcccgcatcaaggccatcaccccggccggtaacaccgtggtgctg
ctggacgaatcgggccgcgacggcctgcgcaagatgatcgacgcggcgcgccgcacccgc
cgcgacaacggcgtgttcgaactcgcctggagcaacaccggcgtgacggtgacggccaac
ctgaagatcgtcggccaggtcaccccgccgccacaggccgccgtaccgcagtcgggcacc
aacttcaagcgcctgcgcctgccggagacgatcatcgccgccgcaccggcggcaccggca
cccgctcctgcccccgcccccgcgccgggcgcgccggcccctgccgccccggcaccggcc
gcgccggcaccgacgcgcggcgccggcgccaccgtcggagccatgccatga

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