Mesocricetus auratus (golden hamster): 101826917
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Entry
101826917 CDS
T08306
Symbol
Scn10a
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
maua
Mesocricetus auratus (golden hamster)
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
maua04040
]
101826917 (Scn10a)
Ion channels [BR:
maua04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101826917 (Scn10a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
CcmD_alt
Na_trans_cytopl
IQ
Motif
Other DBs
NCBI-GeneID:
101826917
NCBI-ProteinID:
XP_040596093
EnsemblRapid:
ENSMAUG00000014414
LinkDB
All DBs
Position
Unknown
AA seq
1856 aa
AA seq
DB search
MNLSLGRKVTRGGADGGTHLSLTRSRSWFSIFITVTILFNCVCMTQSDLPEKIEYAFTVI
YTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGAAIDLRGISGLRTFRVLRAL
KTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLFKGNLKNKCVWNGTDP
HKAHNSSSEMTGNYYIKNGTTDPLLCGNGSDAGHCPRDYVCLKTSENPDFNYTSFDSFAW
AFLSLFRLMTQDSWERLYQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQN
QATLAEIEAKEKKFQEALEMLQKEQEVLAALGIDTSSLHSHNGSPLAPRNASERKHRMKS
RVSEGSTDDRSPQSEPYNQRRMSFLGLSSGRRRASHSSVFHFRAPSQEVSFPDGITDDGV
FHGDHENHRGSLYLGRAAGQAGPLPRSPLSQSPNPGPGHREEGQLTVPTGGELAAGAPEG
PQALEAAGQKKNFLSAEYLNEPFRAQRAMSVVSIMTSVIEELEDSKLKCPPCLISLAQKY
LIWECCPKWMKFKMVLFELVTDPFAELTITLCIVVNTIFMAMEHYPMTEAFDAMLQAGNI
VFTVFFTMEMAFKIIAFDPYYYFQKKWNIFDCVIVTVSLLELSISKKGSLSVLRTFRLLR
VFKLAKSWPTLNTLIKIIGNSVGALGNLTFILAIIVFIFALVGKQLLGEYYGCRRDGTAL
WREERLRWHMCDFFHSFLVIFRILCGEWIENMWVCMQVSEKYICLILFLTVMVLGNLVVL
NLFIALLLNSFSADNLTAPEDDGEVNNLQVALARIQAFGHQATQAISSYFSSRCRLRWSK
VGPQLGVKPSLSSPKAENHIAVDAVNNAMESPAKPALGDPKEEHRDFITDANVWVSVPIA
EGESDLDEEDTEQNSQSSWQEESPKEQEEELPPVPSREDHKAPKSPGSATSSEDLAPYLG
GRWKSEATPQVPAEGVDDTSSSEGSTVDCPDPEEILRKIPELADGLEEPDDCFTEGCIRR
FPCCQVNTSKFPWATGWQLRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLDKKPRV
KSMLEYTDRVFTFIFVLEMLLKWVAYGFKKYFTNAWCWLDFLIVNISLTSLIVKILDYSS
DVASLKALRTLRALRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVN
LFAGKFSKCIDTSSNPFSIVNSTIVNNRSECHNQNHTGHFFWVNVKVNFDNVAMGYLALL
QVATFKGWMDIMYAAVDSGEIGSQPQWEGNLYMYLYFVVFIIFGGFFTLNLFVGVIIDNF
NQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIA
IMVLICLNMITMMVETDDQSEEKTKILGRINQFFVAVFTGECVMKMFALRQYYFTNGWNV
FDFIVVILSIGSLVFSAILKSLESYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALM
MSLPALFNIGLLLFLVMFIYAIFGMASFAYVVEEAGIDDMFNFKTFGNSMLCLFQITTSA
GWDGLLSPILNTGPPYCDPHLPNNSTTKGNCGSPAVGIVFFTTYIIISFLIVVNMYIAVI
LENFNVATEESTEPLSEDDFDMFYETWEKFDPEATQFIAFSALSDFADTLSGPLRIPKPN
QNILIQMDLPLVPGDKIHCLDILFAFTKNVLGESGELDSLKTNMEEKFMATNLSKASYEP
IATTLRWKQEDISATIIQKAYRSYVLQRSLTLSNPLGVPRAEQDDMPPPGEGYATFMTND
ISGLPDKSETASATSFPPSYDSVTRGLSDRANLSTSSSVQNEDEATGKEESPPGPQ
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctctctgggccgcaaggtaacccggggtggggcggacggaggtacccacttg
tccttaacacggtctcgcagctggttctccatatttatcaccgtcactatcctgttcaac
tgtgtgtgcatgacccaaagcgatcttccggagaaaatcgagtatgccttcacggtcatc
tacaccttcgaggctctgataaagatactggccagagggttttgtctaaacgagttcact
tacctgcgagatccctggaactggctagacttcagcgtcatcaccctagcgtacgttggt
gcagcaatagacctccgaggaatctcagggctgcggacgttcagagttctcagagccctg
aaaactgtttctgtgatcccaggactgaaggtcatcgtgggagccctgatccactcggtg
agaaagctggccgacgtgaccatcctcactgtcttctgcctgagtgtctttgccttggtg
ggcctgcagctcttcaaggggaacctgaagaacaaatgcgtgtggaacggtacggatccc
cacaaggctcacaactcctcgtctgaaatgacaggaaattactacatcaagaatggcacc
accgaccctttgctatgtggcaatggatctgatgctggacactgcccccgtgattacgtc
tgcctgaagacttctgagaacccggatttcaactacaccagctttgactcgttcgcgtgg
gcattcctctcactgttccgtctcatgacgcaggactcctgggagcgcctgtaccagcag
acactccgggcctctgggaaaatgtacatggtcttttttgtgcttgtcatcttcctcggg
tcgttctacctggtcaatttgatcttggccgtggtcaccatggcgtacgaggagcagaac
caggcgacacttgcggaaatcgaagcgaaggaaaagaagttccaggaagcgctcgaaatg
ctgcagaaggagcaggaggtgctggcagccctagggatcgacacgtcctcgctccattcc
cacaacggatcaccgttagcccccagaaacgccagtgagagaaaacacagaatgaaatca
agggtgtcagagggctccacagacgacaggtcaccccaatccgagccttacaaccaacgc
aggatgtctttcctaggcctgtcttctggaagacgcagagctagtcacagcagtgtgttc
cacttccgagcacccagccaggaggtctcgtttcctgatgggatcacagatgatggagtc
ttccacggagatcacgaaaaccatcgaggctccctgtatctgggcagggctgctgggcag
gcaggtcctctccccaggagcccactgtctcagtctcccaaccctggcccaggacatcga
gaagagggacagctcacggtgcccactggtggtgagcttgccgctggagctcctgaaggc
ccgcaggcacttgaggctgcgggacagaagaagaatttcctgtctgcagagtacttgaac
gaacctttccgagcacagagggcgatgagtgtggtcagtatcatgacgtctgtcattgag
gaacttgaagattctaagctgaagtgcccgccctgcctgatcagcttggctcagaagtat
ctgatctgggagtgctgccccaagtggatgaaattcaagatggtcctcttcgagctggtg
acagatcccttcgcagagctcaccatcaccctctgcattgtggtgaacaccatcttcatg
gccatggagcactaccccatgactgaagcctttgacgccatgctccaggccggcaacatt
gttttcacggtgttttttaccatggagatggccttcaagatcattgccttcgacccctac
tactacttccagaagaagtggaacatctttgactgtgtcattgtcaccgtgagcctgctg
gagctgagcatatccaagaagggcagcttgtccgtgcttcggaccttccgcttgctgcgg
gtcttcaagctggccaaatcgtggcccaccctcaacactctcatcaagatcatcggcaac
tccgtgggggccctgggcaacctgaccttcatcctggccatcatcgtcttcatcttcgcg
ctggttgggaagcagcttctgggggagtactacgggtgccgcagggacggcaccgccctg
tggcgggaggagcggctgcgctggcacatgtgcgacttcttccactccttcctggtcatc
ttccggatcctctgcggagagtggatcgagaacatgtgggtctgcatgcaggtcagcgag
aaatacatctgcctcatcctcttcttgaccgtgatggtgctgggcaacctcgtggtgctc
aacctcttcatcgccttgctgctgaactccttcagcgctgacaatctcacagccccggag
gacgatggagaggtgaacaacttgcaggtagcactggccaggatccaggcattcggccac
caggccactcaggccatttccagttacttcagcagccgctgtcggctccggtggtcaaag
gtggggccccagctaggggtgaagccctccctcagcagccccaaagcagagaaccacatc
gctgttgacgccgtcaacaatgcaatggagagcccggcaaagccagctctcggtgacccc
aaggaggagcacagggacttcatcactgatgctaacgtgtgggtctcggtgcccattgcc
gagggagaatctgatctcgatgaggaagacactgagcagaattctcagagctcttggcag
gaagagagccccaaagaacaggaggaagagctgccgccagtcccaagccgtgaagaccac
aaagcgcctaaaagcccaggctctgcgacgtcctcagaggacctggctccatacctgggt
gggaggtggaagagcgaggctactcctcaggtccctgctgagggagtggatgacaccagc
tcttcggagggcagcacggtggactgtccggacccagaggaaatcctccggaagatcccc
gagctggcagacggcctggaagagccagatgactgcttcacagaaggctgcattcgccgc
tttccctgctgccaagtgaataccagtaagtttccttgggccacaggctggcagttgcgc
aagacctgctaccgcatcgtggagcacagctggtttgagagtttcatcatcttcatgatc
ctgctcagcagtggagccctggcctttgaagacaactacctggataaaaagccgcgagtg
aagtctatgctggagtacaccgacagagtgttcaccttcatctttgtgttggagatgctg
ctcaagtgggtagcttatggcttcaagaagtacttcaccaacgcctggtgctggctggac
ttcctcattgtgaatatctctctgaccagcctcatagtaaagatccttgactattcatca
gacgtggcatccctcaaagctcttcggactctccgcgccctccgaccactgcgggctctg
tctcggttcgaaggcatgagggtagtggtggacgccctggtgggcgccatcccctccatc
atgaacgtcctcctggtctgcctcatcttctggctcatcttcagcatcatgggcgtgaac
ctcttcgccgggaaattttccaagtgcatcgacaccagcagcaatccattttctattgtg
aattcgaccattgtgaataataggtcggagtgtcacaatcaaaaccacaccggccacttc
ttctgggtcaacgtgaaggtcaactttgacaatgttgctatgggttacctcgcgcttctg
caggtggcaaccttcaaaggctggatggacattatgtatgcagccgttgactccggagag
atcggcagccagcctcaatgggagggcaacttgtacatgtacctatacttcgtcgtcttc
atcattttcggtggcttctttacactgaatctctttgttggggtcataatcgacaacttc
aatcaacagaaaaaaaagctagggggccaggatatcttcatgacagaggagcagaagaag
tactacaatgccatgaagaagctgggctccaagaagccccagaagcccatcccacggccc
ctgaataagtaccagggctttgtgttcgacatcgtgaccaggcaagcttttgacatcgcc
atcatggtcctcatttgcctcaacatgatcaccatgatggtggagacggacgaccagagc
gaggagaagacaaagatcctgggcagaatcaaccagttcttcgtggccgtcttcacgggc
gagtgtgtgatgaagatgtttgccctgcgacagtactacttcaccaacggctggaacgtg
ttcgacttcatcgtggtgatcctgtccattgggagtctggttttttctgcaatccttaag
tcacttgaaagttacttctccccgacgctcttccgggtcatccgtctggccaggatcggc
cgcatcctcaggctcatccgagcagccaaggggatccgcaccctgctctttgccctcatg
atgtccctgcccgccctcttcaacatcggcctcctgctcttcctcgtcatgttcatctac
gccatcttcggcatggccagcttcgcttatgttgtggaagaggccggcatcgatgacatg
ttcaacttcaaaacctttggcaacagcatgctgtgccttttccagatcaccacgtcagcc
ggctgggacggcctcctcagccccatcctcaacacggggcccccgtactgcgaccctcac
ctacccaacaatagtaccaccaaggggaactgtgggagcccggccgtgggcattgtcttc
ttcaccacctacatcatcatctccttcctcatcgtggtcaacatgtacatcgcagtgatt
ctggagaacttcaacgtggccacagaggagagcacggagcccctgagcgaggacgacttt
gacatgttctatgagacctgggagaagttcgacccggaggccacccagttcattgccttt
tctgccctctcagacttcgcagacacgctctctggccctcttaggatcccaaaacccaat
cagaatatattgatccagatggacctgccgttggtccctggagacaagatccactgtctg
gacatccttttcgccttcacaaagaatgtcttgggagaatctggagagctggattctctg
aagacaaatatggaagagaaattcatggccacgaatctttccaaagcatcctacgagccg
atagcaaccaccctccggtggaagcaggaagacatctcagccaccatcatccaaaaggcc
tatcggagctacgtgctgcagcgatccttgacgctctccaaccccctgggtgtgcccagg
gctgagcaggatgacatgccgccccctggtgaaggctatgctacattcatgacaaatgac
atcagcgggctcccagacaagtcagagactgcttctgccacatcgttcccgccgtcctat
gacagtgtcaccaggggcctgagtgacagggccaacctcagcacatccagctccgtgcaa
aatgaagatgaggccaccgggaaggaggagagcccccctgggcctcagtga
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integrated database retrieval system
