Mycobacterium avium subsp. paratuberculosis E93: RE97_03850
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Entry
RE97_03850 CDS
T03847
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mavu
Mycobacterium avium subsp. paratuberculosis E93
Pathway
mavu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mavu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RE97_03850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mavu03400
]
RE97_03850
Enzymes [BR:
mavu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RE97_03850
DNA repair and recombination proteins [BR:
mavu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RE97_03850
Prokaryotic type
RE97_03850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AJK78406
UniProt:
A0A7L5MG50
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All DBs
Position
847415..848098
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AA seq
227 aa
AA seq
DB search
MTARPLNELVEPGWARALQPVAEQVARMGQFLRAEIAAGRRYLPAGPNVLRAFTYPFDEV
KVLIVGQDPYPTPGHAVGLSFSVAPDVSPLPRSLANIFQEYTADLGHPPPSCGDLTPWAQ
RGVLLLNRVLTVRPSNPASHRGKGWEPVTECAIRALTARQQPLVAILWGRDASTLKPILA
QGNCVAIESPHPSPLSASRGFFGSRPFSRANKLLAEMGADEIDWRLP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgcgcccgctgaatgaactcgtcgagcccggctgggcgcgtgcgttgcagccg
gtggccgagcaggtcgcccggatggggcagtttctgcgggccgagatcgcggccgggcgc
cggtacctgccggccggcccaaacgtgttgcgcgcgttcacctatcccttcgacgaggtc
aaggtgctcatcgttgggcaggatccctatccgacgccgggacacgctgtggggctgagc
ttttcggtggcacccgacgtgtcgccgctgccgcgcagcctggccaacatcttccaggag
tacaccgcggacctgggccacccgccgccctcgtgcggcgacctgacgccctgggcgcag
cgcggcgtgctgctgctgaacagggtgctcaccgtgcgccccagcaacccggcgtcgcac
cggggcaagggctgggagccggtgaccgagtgcgccatccgggcgctgaccgcgcgccag
cagcccctggtcgccatcctgtggggccgtgacgcctcgaccctgaaaccgattctggcc
caaggtaattgcgtggccatcgagtcgccgcacccgtctccgctgtcggcgtcgcggggg
ttcttcgggtcgcggccgttcagccgggccaacaagctgctggccgagatgggcgccgac
gagatcgactggcggctgccctga
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