Candidatus Methylopumilus turicensis: BN1209_0963
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Entry
BN1209_0963 CDS
T03844
Symbol
rmlC
Name
(GenBank) dTDP-4-deoxyrhamnose-3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mbac
Candidatus Methylopumilus turicensis
Pathway
mbac00521
Streptomycin biosynthesis
mbac00523
Polyketide sugar unit biosynthesis
mbac00541
O-Antigen nucleotide sugar biosynthesis
mbac01100
Metabolic pathways
mbac01110
Biosynthesis of secondary metabolites
mbac01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
BN1209_0963 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BN1209_0963 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BN1209_0963 (rmlC)
Enzymes [BR:
mbac01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
BN1209_0963 (rmlC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CEN56006
UniProt:
A0A0B7IZR6
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All DBs
Position
1:complement(946645..947187)
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AA seq
180 aa
AA seq
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MKATPLAIPDVFLIEPQVFGDNRGFFFESFNHAKFEQAIGRQVKFVQDNHSKSAKGVLRG
LHYQDPQPQGKLVRVTQGEVFDVAVDIRQDSPTFGKCVGELLSAVNKKQLWIPEGLAHGF
LVLSDTAEFLYKTTDYYAPEFDHCIRWDDPTLAIEWPLNETPKLSSKDQQGLLFSEMFNR
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaacgccactcgcaattccagatgtgtttttaattgagccacaagtgtttggg
gacaatcgtgggttcttttttgagagctttaatcacgctaagtttgagcaggcgattggt
cgtcaggtgaagtttgtgcaggacaaccactcaaaatccgccaagggagtactgcgcggc
ctgcactaccaggatcctcagccacaaggtaagcttgtaagagttactcagggcgaggtg
tttgatgtcgctgtcgacattaggcaggattctccaactttcggtaagtgtgtaggggag
ttgctgtcggctgtgaacaagaagcagctctggatccctgaagggttggcgcacggattc
ctggtgctttctgatactgcagagtttttgtataagaccacggactactatgcgccagaa
tttgatcattgtatccgctgggatgacccaacgcttgcgattgagtggccgcttaatgaa
acgccgaaattgtcatcaaaagatcaacaaggtctgttattttccgaaatgtttaaccgt
taa
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