Methanosarcina barkeri 3: MSBR3_0069
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Entry
MSBR3_0069 CDS
T04533
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mbak
Methanosarcina barkeri 3
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbak03016
]
MSBR3_0069
Enzymes [BR:
mbak01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MSBR3_0069
Transfer RNA biogenesis [BR:
mbak03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSBR3_0069
Prokaryotic type
MSBR3_0069
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AKB80647
UniProt:
A0A0E3SJ74
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All DBs
Position
91586..92902
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AA seq
438 aa
AA seq
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MEVPKIEKQIGIDLYSTDTDGLGGQLRQEVEDFIVKEITNREEEQEGKYLILELVKRDWD
THHLTRTLAKILQISQKRISVAGTKDKRALTTQKISVFDIDAQEIEKIHLKDIELKVLGR
SRKSVELGDLWGNNFRITIRNITHSSEETHKLLEKTTNEILAQGGVPNFFGIQRFGSVRP
VTHLVGKAIVEGDFEKAALFYIAEPFPDEPEETKEARQFVKETRDFKEGLKTYPLHLGHE
RAMMNHLIANPDDFAGAFLVLPKNLYRMFVHGYQSYIYNTVLCRRIEKGLPLNEAVEGDI
VCFKNEFGLPDSSKTEQVTSETVIAMNRLIKRNRAFITAPLPGYTTEFASGIPGEIEQAV
LKELKVPLQGFNIEKVPEMSSKGTRREVLLQVEPKFEVGEDELNPGKSKAVLEFMLPKGS
YATTVLREYMKVDPLQMS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgccgaaaattgaaaaacaaatcggaatagatctttactccacagatactgat
ggccttggagggcagcttcggcaggaagttgaggattttattgttaaagaaattacgaac
agagaggaagaacaggaaggaaaatatctaattcttgaactagtaaagcgcgattgggac
acacatcacctgacccgaactcttgcaaaaatcctccagataagtcagaagagaattagc
gttgcaggtacaaaggacaaacgtgcacttaccactcagaaaattagcgtttttgatatc
gacgcccaggaaattgagaaaatccacttaaaagacatagagctgaaagtccttggccgt
tcacggaaatccgttgaactcggagacctgtggggaaacaatttcagaataactattcgg
aatataacccactcgagtgaggagacacacaaattactcgaaaaaaccacaaacgaaatc
cttgctcagggcggagtcccgaacttcttcggaatccagcgtttcggctctgtacgccct
gttacgcacctggtaggaaaagcaattgttgagggagattttgagaaagctgctctgttt
tacattgccgaacccttccctgatgaacctgaggaaacaaaggaagcccgccagttcgtt
aaagagacacgcgattttaaagaaggcctgaaaacctaccctcttcatcttgggcacgaa
agagcgatgatgaaccatctaatagccaatccagatgattttgcaggagcttttctcgtt
ctcccgaaaaatctctacaggatgttcgtgcacggttaccagtcctatatttataacaca
gtcctgtgcagacgaattgaaaaaggtcttcctttaaatgaagctgtagaaggcgatatt
gtttgttttaagaatgagtttggactaccggattcttcaaaaaccgaacaggtcacatcg
gaaaccgtaattgccatgaaccgccttattaagagaaaccgggctttcataaccgctcct
cttccgggctatactacggaatttgcgtcaggtattccgggagagatcgaacaggcagtt
ctcaaggaactcaaagtccctctacagggtttcaatatagaaaaagttcctgaaatgagt
tcgaaaggcacccgtagagaagttcttctgcaggttgaaccgaagtttgaggtcggagag
gatgaactgaatcctggaaagtcaaaagctgtgcttgaattcatgttaccgaagggaagc
tacgcaacaaccgtgctgcgagagtatatgaaggtagatcctttgcaaatgagttaa
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