Methanosarcina barkeri 3: MSBR3_3403
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Entry
MSBR3_3403 CDS
T04533
Name
(GenBank) ATP-dependent RNA helicase, EIF-4A family
Organism
mbak
Methanosarcina barkeri 3
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
Helicase_C
RNA_helicase_helical
DEAD
ResIII
HHH_2
HHH_5
HHH
5_3_exonuc
Zip
Motif
Other DBs
NCBI-ProteinID:
AKB83981
UniProt:
A0A0E3SNC7
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Position
4462892..4465783
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AA seq
963 aa
AA seq
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MNESLFPEKPGFMKHPLIKPDTVEQRLYQLNLAGKALEGSSLVVLPTGLGKTIIALFVIV
SRLQRFGGKVLILSPTKPLVEQHATFFKNVMALPEEEVMTFTGSIAPAEREKLWAQGKVI
VSTPQVIENDLLTKRISLEDVSHITFDEAHRAVGNYAYTFIAEKYFESAKNPHVLGITAS
PGSSDEKISEVCQALHVENVSVKTEKDRDVRPYVQEKEIEWFQVQLPSEMAEIRGYLEKI
FDDRLGTIRGLGFSPGSGKYVSKKDLLLFQKKLQGEIRVGGDPAVFTAMSVLAEMVKVNH
AVEMVETQGLGPLRKYLEKLDAEASSSSASKASKRLIDDLYMRKTLYRVKECEVEHPKLE
LARKLVSEQLKGSPDSRVIVFTNYRDTAEIVVNALSGFSGIVPIRFVGQASRRKDKGLTQ
KQQVEVLDKFRAGEYNVLVATSVAEEGLDIPSTDLVLFYEPIPSEIRSIQRKGRTGRQHK
GRVIILVTKGTRDEAYYWSSKSKEKRMLNSMHGLEALLEPKNSKQSLKLSDFESKIFIPD
HEQNEAENEIKINNNFENEDITPENKDLMQESSNLAVNLSGFVNSRDKAVDSNFFEDNKD
AATDSNSLAINKDVTIDSSSFADIGNRAADVRDFTVDRGRLTIDSRNKAAGLGYNRTSEE
TNEDNCEVGKEKGNNQKNEEKNREEKSKEEKSKEEKSKKEKSKEEKSKEENVKERQKTFV
YFETLSGKKTESAPETAAEASEIGVSPESLKMVVDYREAKSGVANTLDKLGVEVIFTTLE
IGDYVVSDRLAVERKRTDDFVNSLVDGKRNLFAQLSDLTRVYEKPVLIIEGTELFTSRQI
NPNAIYGSLVSISIDFGVSLLYSRDEEETAAILKMLAKREQMENKREVNPHGKKSTSTLT
EQQEYLVSAIADIGPKAARNLLLHFGSVEAIMKADAKELKNVKLIGPKRAAKIRELLETP
YKE
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagagtctttttcctgaaaaacctgggttcatgaagcacccgctgataaaaccc
gataccgttgagcagaggctctatcagttgaatcttgcaggaaaggccctggaaggctca
agccttgttgtccttcctacggggcttggaaaaaccattatagctctttttgtaattgtt
tccaggcttcagcgctttggaggaaaagtcctgattctttccccaacaaagccgcttgta
gagcagcatgctacttttttcaaaaatgtgatggcacttcccgaagaagaggttatgact
tttacggggagcattgcgcctgcagagcgggaaaaactttgggcccaggggaaggtcata
gtttccacacctcaggtaattgaaaatgaccttcttacaaaacgaatcagccttgaggac
gtaagccacataacctttgacgaagcccacagggcagtcggaaattacgcttatactttt
attgcggaaaagtatttcgagagcgcaaagaatcctcacgtgctcggaattactgcaagt
ccgggcagttcggatgagaaaatctctgaggtctgccaggctttacatgttgaaaatgtc
tccgtgaaaacggaaaaagatagggatgtccgtccttatgtgcaggaaaaagagatagaa
tggtttcaggtccagcttccttcagaaatggctgaaatccgaggttatctggaaaaaatc
tttgatgaccggctcggaaccataagaggcctgggtttttctccaggcagcggaaaatat
gtttccaaaaaggatctcttgcttttccagaagaaattgcagggtgaaatccgggtagga
ggagatcctgcggtttttactgccatgtctgtgcttgccgaaatggtgaaggttaaccat
gctgtggaaatggttgagactcaggggcttgggcctctcaggaagtacctggagaaactt
gacgctgaagcttcttcaagcagtgcaagcaaggcttcaaaaagactgatagacgatctc
tatatgagaaaaaccctttacagagtaaaggaatgtgaggtcgaacatcctaaactcgag
cttgcgcggaaactcgtatccgaacagctaaaaggaagtcctgattccagagtaattgtt
tttacgaattatagggacacagcagagatagtggtaaatgctctatcaggattttcagga
attgtccctatccgttttgtgggacaggcctcgcgccgtaaggataaagggcttacgcaa
aaacaacaggtggaagttcttgataaattcagggcaggagaatataacgtacttgtagct
acctcagttgccgaagaagggcttgatattccttccacggatctggtattattctacgaa
cccatcccctcggaaattcggagcatccagcgtaaaggcaggacaggaaggcagcataaa
ggcagagtcattatactggtgacaaagggtacacgtgacgaagcatattactggagcagt
aagagtaaggaaaaaaggatgctgaatagtatgcatgggcttgaagcccttcttgagcct
aaaaactcaaagcagagtttgaaactttcagattttgagtccaaaatttttattccggat
catgagcaaaatgaagctgaaaatgagattaaaataaataacaattttgaaaatgaagat
ataaccccggaaaataaggatctaatgcaggaaagcagtaatctggctgtaaatctcagt
ggttttgtaaatagcagggataaagctgtagatagcaacttttttgaagataacaaggac
gcagctacagatagcaatagtcttgcaattaacaaggacgtaactatagatagtagtagt
tttgcagatattggaaacagggctgcagatgttagagatttcactgtagaccgtgggcgt
ttaactatagacagcaggaataaggccgcaggcttaggctacaacaggacgagtgaggaa
actaacgaagataactgtgaagttgggaaagaaaaaggaaacaaccaaaagaacgaagaa
aaaaatagagaagaaaaaagcaaagaagaaaaaagcaaagaagaaaaaagcaaaaaagaa
aaaagcaaagaagaaaaaagcaaagaagaaaacgtcaaagaaagacaaaaaacatttgtt
tattttgaaactctttccggaaagaaaacggaatccgcacctgaaactgctgcagaggca
tccgaaataggagtcagtcccgaatccctgaaaatggtagtggattacagggaagcaaaa
agtggggttgctaatactcttgataagcttggagtagaagttatttttaccacgcttgaa
attggtgattacgttgttagcgaccgccttgctgtagaaagaaagcgcacggatgacttt
gtaaactctcttgttgacgggaaacgtaatctttttgcgcaattgtcggatcttacaaga
gtatacgaaaagcctgttcttatcattgaaggaacagaactttttacttccaggcaaatt
aatcctaatgctatttacggctctctggtatctatttcaattgattttggagtatcactg
ttatattcgagagacgaggaagagactgcagcaattttaaaaatgcttgcaaagcgtgag
caaatggaaaataaacgtgaagtcaatccccatggaaaaaagtcaaccagtacccttact
gagcagcaggaatacctggtgtctgcgatcgcagacattgggccgaaagctgcaagaaac
cttcttttacactttggctcagtagaggctattatgaaagctgatgctaaagaactgaag
aatgtaaaattaatagggccaaaaagagcagcaaaaattagagagctacttgaaaccccc
tataaagaataa
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