Labilibaculum antarcticum: ALGA_1272
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Entry
ALGA_1272 CDS
T05376
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mbas
Labilibaculum antarcticum
Pathway
mbas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ALGA_1272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbas03400
]
ALGA_1272
Enzymes [BR:
mbas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ALGA_1272
DNA repair and recombination proteins [BR:
mbas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ALGA_1272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
PriA_CRR
nSTAND3
YjdM_Zn_Ribbon
DZR_2
Bin3
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
BAX79657
UniProt:
A0A1Y1CH17
LinkDB
All DBs
Position
1669412..1671886
Genome browser
AA seq
824 aa
AA seq
DB search
MNKTTDFADIILPLPLAQLFTYSIPEELKADVAIGKRVVVPFGSKKFYTGIVKSIHNTPP
TDYSTKEIITCLDESPIINSFQFSFWEWISQYYQCTIGDVFKAALPSGLKLESQTKITVN
ENFQAQEVLSKTEEQILNVLKHSKDVNISTLNQATGLKNTLPQVKSLLEKGAVSIEEQII
NTYKEKKKEFVRLASNFNESDIAAVIDGLKRAKKQQEILHSYLNLSKHYFEENALKVSVT
ELLKSIDASKGILKSLVEKNILEIYHEKLDRIDLSETETSGLKELNEHQQKAIIETRKQF
EEKNCVLLHGVTSSGKTEIYIHLIQEQLQQGKQVLYLLPEIALTTQIINRLRTVFGNKVG
IYHSKFNDAERVEIYNNINQNDPENAYQVILGVRSSIFLPFKNLGLVIVDEEHENTYKQF
DPAPRYHARDASLYLAHLHKAKTLLGTATPAIETYYNAKTGKYGLVELFQRHQNLEMPEI
IIADVKEATRKKQMKSMFSPQLMQMMETCLENKEQIILFQNRRGYSPYLECKSCGWVPHC
PNCSVSLTYHRYNNQLVCHYCAHSIHPPTSCEHCGSTEIEDRGFGTEKIEEELTGLFPDA
RIARMDLDTTRKKMAYEKLIYKFENNELDILVGTQMVSKGLDFDNVSLVGVLNADSMLNY
PDYRAYERSFQMMAQVSGRAGRKKKRGKVLIQTYTPEHPIIKNVIENDYVSMYNGQLAER
KEYIYPPYYRLINICLKHKNQTLVNQAAAILAKSLHKVFGIRVFGPQSPVINRIQNYHIV
NILLKIEKKSSPSKAKWILNQHANHLKSMDQFKSIQVNFDVDPM
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagactaccgattttgcagatatcatactaccacttccattggctcagcttttt
acctactctattccagaggaattaaaagctgatgttgccattggaaaaagggtagttgtt
cctttcggcagtaaaaagttctacaccggaattgtaaaaagcattcacaatactcctcca
acagattattccaccaaagagattatcacttgtctggatgaatctccaattatcaattca
tttcaattcagtttttgggagtggatttcacaatactatcagtgtacaataggtgacgtt
tttaaggcagctcttccttccggattaaagttggaaagtcagaccaagataactgtaaat
gaaaattttcaggctcaggaagttcttagcaaaaccgaggaacaaattctgaatgtacta
aagcattcaaaagatgtaaatatttcgactttaaatcaggcaactggtctaaaaaacacc
ctaccacaggtaaaatctttgcttgaaaaaggagctgtttctattgaggaacaaatcatt
aacacctataaagagaaaaagaaagaatttgttcgactggcatctaattttaacgaatca
gatatagcggctgtaattgatggcttaaaaagagctaaaaaacagcaggagattcttcac
tcctacctcaatctttccaaacactattttgaagaaaatgcccttaaagtttcggtgaca
gaacttctaaagtctattgatgcctcgaaaggaattttaaaaagtttagtcgaaaaaaac
attcttgaaatttaccatgaaaaactggatcggattgatctttcggaaacggaaacttcg
ggactaaaagagttgaatgaacatcagcagaaagcaattattgagacccgtaagcaattc
gaggaaaagaattgtgtgttgcttcacggagtaacttcaagcggtaaaaccgagatatac
attcatttgattcaagagcaattacagcaaggtaaacaggttctttaccttctcccagaa
attgctttaacaactcagattattaaccgcttacgaaccgtatttggaaataaggtagga
atctatcattccaaatttaacgatgccgagcgcgtagaaatctacaacaacatcaatcaa
aatgatcctgaaaatgcctatcaggttattttaggggttcgatcatcgatattcctgcct
ttcaaaaacttaggtttggttattgtcgatgaagagcatgaaaacacttacaaacagttt
gatccggctccccggtatcacgcccgcgatgcttctctttatctggctcatctgcacaaa
gcaaaaaccttattgggtactgcaactccagcaatagaaacctactacaatgccaaaacg
ggcaagtatggtttggtagaattgtttcagcgacaccaaaatctggaaatgcccgaaata
attattgctgatgtaaaagaagcaacgcgaaagaaacaaatgaaatcaatgttctctcct
caactgatgcaaatgatggagacttgcctggagaataaggaacagattattttatttcag
aacagaagaggatattctccctacctggaatgtaaaagttgtggatgggttcctcattgt
ccaaactgttcggttagcttaacgtatcaccgatacaacaatcagctggtttgccattac
tgtgcacacagtattcatccgccaacgagttgtgagcattgcggttcaaccgaaattgaa
gaccggggatttggaaccgaaaaaattgaagaagaattgacgggcttatttcctgatgca
cgaattgcacgaatggatttggataccactcgaaaaaagatggcttacgaaaaactcatt
tacaaattcgaaaacaatgaactcgatattttagtagggacgcaaatggtttcaaagggt
ctcgattttgataatgttagtttagttggggtattgaatgctgactcgatgctgaattat
ccggattaccgtgcctatgagcgcagctttcaaatgatggctcaggtttccggtcgtgcc
ggacgaaaaaagaaaagaggaaaagtgttgattcaaacttatacaccagaacacccaatc
attaaaaatgtgatcgaaaatgattacgtatctatgtataatggtcaactggcagaaaga
aaagaatacatttatccaccctactacagattaatcaatatctgtttgaaacacaaaaac
cagacattggtgaatcaggctgctgcgatccttgcaaaatccttgcataaagtttttggc
attcgcgtttttggcccgcaatcgcctgttataaaccgaattcaaaactaccacatcgtt
aatatacttttgaaaatagagaagaaaagttcgccatcaaaagccaaatggattttaaat
caacacgcgaatcatttaaaaagtatggatcaatttaaatctattcaagtgaattttgat
gttgatccgatgtaa
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