Candidatus Methylopumilus planktonicus: BN1208_0933
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Entry
BN1208_0933 CDS
T03869
Symbol
rmlC
Name
(GenBank) dTDP-4-deoxyrhamnose-3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mbat
Candidatus Methylopumilus planktonicus
Pathway
mbat00521
Streptomycin biosynthesis
mbat00523
Polyketide sugar unit biosynthesis
mbat00541
O-Antigen nucleotide sugar biosynthesis
mbat01100
Metabolic pathways
mbat01110
Biosynthesis of secondary metabolites
mbat01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
BN1208_0933 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BN1208_0933 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BN1208_0933 (rmlC)
Enzymes [BR:
mbat01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
BN1208_0933 (rmlC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CEZ19817
UniProt:
A0A0D6EW28
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All DBs
Position
1:complement(877182..877736)
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AA seq
184 aa
AA seq
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MKVTPLSIPDVLLIEPHVFEDSRGCFFESFRDDLFRKETSLKVSFVQDNHVSSRRGVLRG
LHYQLPPHAQGKLVRVIQGEVLDIALDIRRSSPTFGKHVINILSAKNKKQIWIPEGFAHG
FLTLSRNSEFLYKVTSLYKADFERSILWNDPILNISWPANIDIITSPRDSKSEAFSKAYI
FEDL
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgactcctttaagtattccagatgtgcttttaatcgaacctcacgtatttgaa
gattcacgcggctgtttttttgaaagctttagagacgatctttttagaaaagaaacttca
ttaaaggtttcatttgtgcaagacaatcacgtaagttcgagaaggggagttttgcgagga
cttcattatcaactccctccacacgctcaaggcaaattagtccgtgttattcaaggagag
gtattagatattgctttagatataaggagatcttcacctacttttggtaaacatgtaata
aatatactatcagctaaaaataaaaaacaaatatggatacctgaaggttttgctcatgga
tttttaacgctctctaggaactctgaatttttatacaaagtaacatctttatacaaagct
gatttcgaaagatccattttatggaatgatccaattttaaatatttcttggccagccaat
attgatattattacctctccaagagactcaaaaagcgaagcattttctaaagcatatata
tttgaagatctatga
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