Drepanopeziza brunnea: MBM_05998
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Entry
MBM_05998 CDS
T03105
Name
(RefSeq) tfiih and nucleotide excision repair factor 3 complexes subunit
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03022
Basal transcription factors
mbe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MBM_05998
09124 Replication and repair
03420 Nucleotide excision repair
MBM_05998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbe03021
]
MBM_05998
03400 DNA repair and recombination proteins [BR:
mbe03400
]
MBM_05998
Transcription machinery [BR:
mbe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MBM_05998
DNA repair and recombination proteins [BR:
mbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MBM_05998
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
LIP1
Motif
Other DBs
NCBI-GeneID:
18761933
NCBI-ProteinID:
XP_007293887
UniProt:
K1WU44
LinkDB
All DBs
Position
Unknown
AA seq
421 aa
AA seq
DB search
MSVSTLASFEYLERLPERDQSLSLLSRLHIVTITAPSRDDPQKVSLTKNFRASLRLALTG
GGEQQSFGIPSHDSTASGVDAEFLDNYARERWEDILHFVVNSVGNSMRQDGTGPPTSVRL
LLEAGKLVTTGRRSGGGITQAGFSFLLQEVNAQVWALLLLWIENAEKMELESVEVLSFLF
MLGSLELGKSYSTATLSASQRAMLKYLVDFGLVYSPSSTPQQFFPTRLSTTLTSDASGLR
SVSAGFDDALKSESGTKGFIIIETNYRLYAYTNSPLQIAVLALFTKMGVRYPNMVTGRVT
RKSVANAISHGITSDQIISYLRAHAHPQLVKAAAVNGNPVLPPTVVDQIRLWQIENERMK
ATAGFLFKEFETQKEYEGCARYADENGVLVWKNDAKRMFFVTRHEQLRDYLKSRKARNDS
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtatcgactcttgcatctttcgagtatctggaaaggcttccagaacgagatcag
tccctttccttgctctctcgacttcacatcgtcacaatcacagccccaagcagagacgac
ccgcagaaagtatccttgacaaagaactttcgcgcttccttgcgacttgccctcactgga
ggtggagagcaacagtcgtttggtatcccgtcccacgactccacggcctcaggagtggat
gctgaatttctcgacaactatgcgagggaaagatgggaggacatcttacattttgtggtc
aacagcgtaggaaacagtatgcgacaagatggcaccggacctccgacatctgttaggctt
ttactagaggcgggcaagctggtcacgactggcagacgttcaggaggaggaattacgcag
gctggattctcttttctattgcaggaagtcaatgcccaggtgtgggcgctgctactgctc
tggatcgagaatgctgaaaagatggaactggaatccgtagaggttctctcgttcttgttc
atgctcgggtctctcgaactgggcaagtcatatagcacagctaccctttcggccagccag
cgagcgatgctgaaatacctggtcgattttggactcgtctacagtccttcctcaacccct
cagcagttcttcccgacgcgactatctacgaccctcacctcagacgccagtgggcttcga
agtgtctctgccggctttgatgatgccctcaagagcgaaagtggtaccaagggttttatc
atcatcgaaaccaactatcgtctctacgcatataccaattcccctctccaaatcgcagtt
ttggctctcttcactaaaatgggcgtccggtatccgaatatggtcactggccgtgtgact
cgcaaatctgtcgccaatgccatctcccacggtatcacatcggaccaaattatatcatac
ctcagggcacacgcacatccgcagttggtcaaggctgccgcagtaaacggaaaccccgtc
ctgccccctaccgtggttgaccagatccgactctggcagattgagaatgagaggatgaag
gctactgctggattcctgttcaaggagttcgagacgcagaaggagtatgaggggtgcgcg
aggtatgcggacgaaaatggagtcttggtgtggaagaacgatgcgaagaggatgttcttt
gtaacgagacatgagcaattgagggattacctcaaatctcgaaaggcgaggaacgattcc
caatga
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