Moschus berezovskii (Chinese forest musk deer): 129538638
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Entry
129538638 CDS
T09065
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129538638 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mbez03041
]
129538638 (PRPF40A)
Spliceosome [BR:
mbez03041
]
Complex A
U1 snRNP components
U1 related factors
129538638 (PRPF40A)
Complex B
129538638 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
129538638
NCBI-ProteinID:
XP_055254843
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MCSGSGRRRSSLSPTMRPGTGAERGGLMVSEMENHPPSRGLGDGERRLSGSSLCSSSWVS
ADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMPGMMS
SVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTTSGAKSMWTEHKSPDGRTYYYNTETKQ
STWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQNTI
VAGSLITKSNLHAMIKAEESSKQEECTTASAAPVPTTEIPTTMSTMAAAEAAAAVVAAAA
AAAAAAAAANASASTSASSTVSGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQLTST
PSVQDQSEVSSNTGEETSKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKE
KRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKES
FQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQL
RKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIR
ALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRF
TNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAI
ISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIE
LDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHH
RKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHK
SDSPESDAEREKDKKEKDREGEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGEL
EKRRRTLLEQLDDDQ
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatgaggccggggact
ggagccgagcgtggaggcctcatggtgagtgaaatggagaaccatcctccctcgcggggt
ctcggggacggggagcggagattgtccggctcaagcctctgctccagctcttgggtctct
gctgacggcttcctgaggagacggccctcgatggggcaccctggcatgcattatgcccca
atgggaatgcatcctatgggtcagagagcgaatatgcctcctgtacctcatggaatgatg
ccacaaatgatgcccccaatgggaggaccaccaatgggacaaatgcctggaatgatgtct
tcagtaatgcctggaatgatgatgtctcatatgtctcaggcttccatgcagcctgcctta
ccgccaggagtaaataatatggatgtagcagcaggtacaacttctggcgccaaatcaatg
tggactgaacataaatcacctgatggaaggacctactactacaatactgaaacaaaacag
tctacctgggagaaaccagatgatcttaaaactcctgctgagcaacttttatctaaatgc
ccttggaaggagtacaagtctgactctggaaagccttattattacaattctcaaacaaaa
gaatctcgctgggccaaacctaaagaacttgaagatcttgaaggataccagaataccatt
gttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagctgaagaaagc
agtaaacaagaagagtgcaccacagcatcagcagccccagttcctacaacagaaattcca
accacaatgagcaccatggctgctgcagaagcagcagctgctgttgttgcagcagcagcc
gcggcagcagcagctgctgctgcagccaatgccagtgcttccacttctgcctctagtact
gtcagtggaactgttccagtcgttcctgagcctgaggttacttcgattgttgctactgtt
gtagataatgaaaatacggtaacaatttctactgaagaacaagcacagcttactagtacc
ccttctgttcaggatcaaagtgaagtgtctagtaatactggagaagaaacatctaagcag
gaaactgtagctgattttactcccaaaaaagaagaggaagaaagccaaccagcaaaaaaa
acatatacttggaatacgaaagaggaggcaaagcaagcatttaaagaattattaaaagaa
aagcgtgtaccatctaatgcttcatgggagcaagctatgaaaatgatcattaatgatcca
cgatatagtgcgttagcgaagttgagtgaaaaaaagcaggcctttaatgcttataaagtc
caaacagagaaagaagaaaaagaagaagcaagatccaaatacaaagaggctaaggaatcc
ttccagcgttttcttgaaaatcatgagaaaatgacttccacaactagatacaaaaaagca
gagcaaatgtttggagagatggaagtctggaatgcaatatcagaacgtgatcgtcttgaa
atctatgaagatgttttattctttctttcaaaaaaagaaaaggagcaagcaaagcagttg
cgaaagagaaattgggaagccttaaaaaacatacttgacaacatggctaatgtgacatat
tctactacttggtctgaagcccagcagtatctgatggataatccaacttttgcagaagat
gaggaattacagaatatggataaagaagatgcattaatttgctttgaggaacacattcgg
gctttagaaaaggaagaggaagaagaaaaacaaaagagtttgcttcgtgaaaggagacga
cagcgtaaaaatagagaatcttttcagatatttttagatgaactgcatgaacatggacaa
ctgcattctatgtcatcttggatggagttgtatccaacaattagttctgacattagattc
actaatatgcttggtcagccggttttttcattaggatcaactgcacttgaccttttcaag
ttttatgttgaggatcttaaagcacgttatcatgatgaaaagaagataataaaagacatt
ctgaaggataaaggatttgtagttgaagtaaatactacttttgaagactttgtggcaata
atcagttcaactaaaagatcaaccacattagatgcaggaaatattaagctggcttttaat
agtttactagaaaaggcagaagcccgtgaacgtgaaagagaaaaagaggaggctcggaag
atgaaacgaaaagaatctgcgtttaagagtatgttgaaacaagctactcctccaatagaa
ttggatgctgtttgggaagatatccgggagagatttgtaaaagagccagcatttgaggat
ataactctagaatctgaaagaaaacgaatatttaaagattttatgcatgtgcttgagcat
gaatgtcaacatcatcattcaaagaataagaagcattctaagaaatctaaaaaacatcac
aggaagcgctcccgctctcgatcagggtcagattcagatgatgatgacagccattcaaag
aaaaaaagacagcgatcagagtctcgttctgcttcagaacattcttctagtgctgaatct
gagagaagttataagaaatcaaaaaaacataagaagaaaagcaagaagagaagacataaa
tcagactctccagagtcagatgctgaaagagaaaaggataaaaaagaaaaagaccgggaa
ggcgaaaaagacagaactagacaaagatcagaatcaaaacacaaatcacctaagaaaaag
actggaaaggattctggtaattgggatacttctggcagtgaactgagtgaaggggaattg
gaaaagcgcagaaggacccttttggagcaactggatgatgatcaataa
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