Moschus berezovskii (Chinese forest musk deer): 129556501
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Entry
129556501 CDS
T09065
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
129556501 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbez03400
]
129556501 (LIG4)
Enzymes [BR:
mbez01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
129556501 (LIG4)
DNA repair and recombination proteins [BR:
mbez03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
129556501 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
129556501
NCBI-ProteinID:
XP_055282642
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MAASQTVASHVPFADLCSTLERIQKSKGRAEKIRHFKAFLDSWRKFHDALHKNQKDVTDS
FYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTRGDAG
DFAMIAYFVLKPRCLQKGSLSIQQVNDILDSIASNNSARRKDLMKKSVLQLITQSSALEQ
KWLIRMIVKDLKLGFSQQTVFSVFHSDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLF
SAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQLHRNGDVYRYFSRNGYNYEDQFG
ASPQEGSLTPFIHNAFKIDVLNCILDGEMMAFNPNTQTFMQKGNKFDIKRMVEDSELQTC
YCVFDVLMVNDKKLGHEALRKRYEILNSIFTPVPGRIEIVQKTQAHTKREVIDALNEAID
KREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIIGGYWGKGARGGMMSHF
LCAVAEKPPSGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHRKAPPSNILCGTE
KPEVYIEPCNSVIVQVKATEIVPSDMYKTGCTLRFPRIEKIREDKEWYECTSLQDLEQLR
GKACGKLASKHLYMGGDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLSNINRVSTVFEDVE
FCVMSGTSSHPKPDLENRIAELGGYIVQNPGPDTYCVIAGSENIRVKNIISSDKHDVVKP
EWLLECFRTRSCVPWQPRFMIHMCPSTKQHFAQEYDQYGDSYFVDTDLHQLKEVFSGIKN
AGEQTPGEMSPVIADLEHRYSWASAPLSMFRHHTIYLDVYAVINDLSTRIKGARLAITAL
ELRFHGAQVVSYLAEGVSHVIVGEDQSRVADLKAIRRTLKRKFKILQERWVTVSIDKCEL
QEEIRYLV
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacagactgttgcatctcacgttccttttgcagatttatgttcgacttta
gaacgaatacagaaaagtaaagggcgtgcagagaaaatcagacacttcaaagcattttta
gattcttggaggaaatttcatgatgcccttcataagaaccaaaaagatgtcacagattct
ttttatccagccatgagacttattcttcctcagctggaaagagagagaatggcctatgga
atcaaagaaactatgctggctaagctttatattgaattgcttaacttgcctcgagatgga
aaagatgcccttaaacttttgaactacagaacaccgactggaacccgtggagatgctgga
gactttgcgatgattgcatactttgtattgaaacccaggtgtctacagaaaggaagccta
agcattcagcaagtaaatgacattttagactccattgccagcaataattctgccagaagg
aaagacctgatgaagaagagtgttcttcagcttataactcagagttcagcgcttgaacaa
aagtggctgattcggatgattgttaaggacctaaagcttggctttagtcagcaaactgta
ttttctgtttttcacagtgatgctgctgagttgcataatgtcaccacagatctggagaag
gtctgtaggcaactgcacgatccttcagtgggtctcagtgacatttccatcaccttattc
tctgcctttaaacccatgctggccgctatagcagatattgagcgaattgagaaggacatg
aaacaccagagtttctacatcgaaaccaagctggacggcgagcggatgcagttgcacagg
aatggggatgtgtaccggtacttctctcgcaatgggtataactatgaggaccagtttggt
gcttccccacaggaagggtccctcacaccgttcattcataacgcattcaaaatagatgtg
ctgaactgtatcctcgacggtgagatgatggccttcaaccctaacacacagacttttatg
caaaaggggaataagtttgatattaaaagaatggtggaggattctgaactgcagacttgt
tactgtgtttttgatgtgttgatggttaatgataaaaagctaggacatgaggccctgaga
aagaggtatgaaattcttaatagtattttcacacctgtaccaggtagaatagaaatagtg
cagaaaacacaggctcatactaagagagaagtaattgatgctttgaatgaagcgatagat
aaaagagaagaggggatcatggtgaaacacccgctgtccatttacaagccagataaaaga
ggtgaagggtggttaaaaattaaaccagagtatgtcagtggactgatggatgagctggac
atcttaatcatcgggggctactgggggaagggtgcccggggtgggatgatgtctcatttt
ttgtgcgctgtggcagagaagcccccttctggtgaaaaaccctcagtgtttcatactctg
tgtcgcgttggctcgggttacaccatgaaagaactgtacgacctgggtttgaagttggcc
aaacactggaaaccttttcataggaaagccccaccaagcaacattctctgtggaacagag
aagccagaggtctacatcgagccttgcaattcagtcattgttcaggttaaggccacagag
atcgtccccagtgacatgtataaaaccggctgcacgttgcgttttccacggattgagaag
ataagagaagacaaggaatggtacgaatgtacatccctgcaggacttagagcaacttcga
gggaaagcctgtggaaagctcgcgtccaaacacctttacatgggtggcgatgacgaacca
caagaaaaaaagcggaaagctgccccaaagatgaagaaagtcattggaattatcgagcac
ctaaaagctcccaacctttctaacataaacagggtttctactgtgtttgaagacgtggag
ttttgtgtcatgagtggaaccagcagccaccccaagcctgacctggagaacagaatcgcc
gaattgggtggttacatagtacagaacccaggcccagacacgtactgtgtgatcgcaggg
tctgagaacattcgagtgaagaatatcatctcttcagataagcatgatgtcgtcaagcca
gagtggctgctagagtgttttaggaccagaagctgtgtgccctggcaaccccgcttcatg
atccacatgtgcccgtcgacaaagcagcactttgcccaggaatacgaccaatatggggat
agttactttgtcgacacagatttgcaccaactgaaggaagtgttttcgggaattaaaaac
gctggtgagcagactcctggggaaatgagtcctgtgattgctgatttggaacacaggtat
tcctgggccagcgcacctcttagcatgtttagacaccacactatttatttggacgtgtac
gctgtcatcaatgacttaagtaccagaatcaagggagctaggttagccatcacagccttg
gagcttcgatttcatggagcgcaagtagtttcctatttagctgagggagtgtctcacgtg
attgttggggaggatcagagtcgggttgcagacttaaaagctattcgaaggactcttaaa
aggaaatttaaaatcttacaagaacgttgggtcactgtttcaatagacaagtgtgaatta
caggaggaaattcggtatttggtttga
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integrated database retrieval system
