Microbacterium binotii: LXM64_04630
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Entry
LXM64_04630 CDS
T08238
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mbin
Microbacterium binotii
Brite
KEGG Orthology (KO) [BR:
mbin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbin03032
]
LXM64_04630 (topA)
03400 DNA repair and recombination proteins [BR:
mbin03400
]
LXM64_04630 (topA)
Enzymes [BR:
mbin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LXM64_04630 (topA)
DNA replication proteins [BR:
mbin03032
]
Prokaryotic type
DNA Topoisomerases
LXM64_04630 (topA)
DNA repair and recombination proteins [BR:
mbin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LXM64_04630 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
ALTTAQ_rpt
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UIN31493
LinkDB
All DBs
Position
913384..916107
Genome browser
AA seq
907 aa
AA seq
DB search
MGSQTTTKSGKTLVIVESPTKMTSIQGYLGDDYEVLSSVGHIRDLASKKDIPAEKKAAYG
KYSIDVDNGFDPFYVVNDRKTKTVAELKRAVKDASEVLLATDEDREGEAIAWHLLEVLKP
KVPVKRMVFHEITKDAIRAAAENTRELDLALVDAQETRRVLDRLYGWDVSPVLWRKVGSG
REGAALSAGRVQSAATRLVVDRERERMSFVSASYWDIETLAVKGDQSFTARLARLDGAPL
ARGTDFDDKGQLKKAVVVLTEEDVRALAAAIESVGTAQVSALESKPGTRSPRAPFTTSTL
QQEAGRKLSMSAKHTMSVAQRLYEKGYITYMRTDSTSLSKQAIEAAREQAVSLYGDRAVP
ANPRVYASKSKNAQEAHEAIRPSGEHFRTPASVASHLDRDEQRVYDLIWKRTVASQMADA
KYETTTVTLALTADKKALEFTASGTVYTFKGFLEAYEEGRDEKRADADKADDQSLPALSV
GDELATREVEPKGHSTSPKPRYTEASLVKALEEKGIGRPSTFASIIDVILDRGYVSKRGQ
ALVPSWLAFSVVRLLEQHFSDLVDYDFTAALEDDLDAIARGEQRREQWLREFYFGSENHV
GLRHIVDNLGDIDARELNATRITDTATLRFGKYGPYLEVVDPADPEAKPRIINIPDELAP
DELTAEKAQELVDAPIAGDRVLGENPDNGKLIVVKDGRFGPYVQEVDPVDPDAVDEATGE
VAEAPKKRGAKKEAAPKPRTASLFKSMSVDTVDLDTALKLLELPRVVGVDPATEEEITAQ
NGRYGPYLKKGTDSRSLDSEQQIFDITIEEALERYAQPKYGARRASSALKEFDADPVSGK
PIKIKDGRFGAYVTDGETNATIPRGETVDDVDFERAKQLLADKRAKGPAPKRTSARKTTT
RKTPAKK
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcagaccacgacgaagagcggcaagacgctcgtgatcgtcgagtcgccgacc
aagatgacctcgatccagggctacctgggtgatgactacgaggtgctcagctccgtgggg
cacatccgtgacctcgcgagcaaaaaggacattccggccgagaagaaggccgcgtacggc
aagtactcgatcgacgtcgacaacggcttcgaccccttctacgtggtcaacgaccgcaag
accaagaccgtcgccgagctcaagcgggcggtgaaggatgcgagcgaggtcctgctcgcc
accgatgaagaccgcgaaggcgaagccatcgcgtggcacctgctcgaggtgctcaagccc
aaggtccccgtcaagcgcatggtgttccacgagatcaccaaggacgccatccgcgccgcc
gccgagaacacgcgcgagctcgatctggccctcgtggacgcgcaggagacccgtcgcgtg
ctcgaccgtctctacggctgggacgtctcgcccgtgctgtggcgcaaggtcggaagcggc
cgcgagggcgccgccctgagcgccggtcgcgtgcagtccgcggccacccgtctcgtcgtc
gaccgggagcgcgagcgcatgtcgttcgtctcggcgagctactgggacatcgagacgctc
gccgtcaagggcgaccagtcgttcaccgcgcgcctggcccgcctcgacggcgcaccgctc
gcgcgcggcacggacttcgacgacaagggccaactgaagaaggccgtggtcgtcctcacc
gaagaagacgtgcgcgcgctggccgcggccatcgagagcgtcggcacggcacaggtctcc
gcgctcgaatcgaagccgggaacccgcagccctcgagcgccgttcacgacctcgacactg
cagcaggaggccggccgcaagctctcgatgagcgcgaagcacacgatgagtgtcgcccag
cgtctctacgagaaggggtacatcacctatatgcgcaccgactcgacctcgctctcgaag
caggcgatcgaggcggcgcgcgagcaggcagtgagcctctacggcgaccgcgccgtgccc
gcgaacccgcgcgtgtacgcgagcaagagcaagaacgcgcaggaggcgcacgaggccatc
cgtccctctggcgagcacttccgcacgcccgcatccgtcgcctcccacctcgatcgcgac
gagcagcgggtgtacgacctgatctggaagcgcacggtcgcgagccagatggccgacgcc
aagtacgagaccaccaccgtcacgctcgcgctgacggcggacaagaaggcgctcgagttc
accgcatccggcaccgtctacaccttcaagggcttcctggaggcgtacgaggagggccgc
gatgagaagcgtgccgacgccgacaaggccgacgaccagtcgctgcccgccctgagcgtc
ggcgacgagctggccacgcgcgaagtggagcccaaggggcactcgacgtcaccgaagccg
cgctacaccgaagcgagcctcgtgaaggcgctggaggagaagggcatcggtcgtccttcc
acgttcgccagcatcatcgacgtcatcctcgaccgcggctacgtctccaagcgcggtcag
gccctcgtgcccagctggctcgccttcagcgtcgtgcgtctgctcgagcagcacttctcc
gacctggtcgactacgacttcacggcggcgctcgaggacgacctcgacgcgatcgcccgc
ggcgagcagcgacgtgagcagtggctgcgggagttctacttcggttccgagaaccacgtc
gggctccgtcacatcgtcgacaatctcggcgacatcgacgcgcgcgagctcaacgccact
cggatcaccgacaccgcgacgctccgcttcggcaagtacggtccgtacctcgaggtggtc
gaccctgcggatcccgaggccaagccccgcatcatcaacatccccgacgagctggcgccc
gatgaactgaccgccgagaaggcgcaggagctcgtcgacgctccgatcgccggcgaccgc
gtgctgggcgagaaccccgacaacggcaagctcatcgtcgtcaaggacggccgtttcggg
ccctacgtccaggaagtcgatcccgtcgatccggatgcggtggacgaggcgaccggtgag
gtcgccgaagcgcccaagaagcgcggcgcgaagaaggaagccgcgcccaagccccgcacc
gcctcgctcttcaagagcatgtcggtcgacaccgtcgatctcgacacggcgctcaagctg
ctcgagctgccgcgcgtcgtcggtgtggacccggcgaccgaagaggagatcaccgctcag
aacggccgctacggtccgtacctgaagaagggcacggactcgcgctcgctcgactccgag
cagcagatcttcgacatcaccatcgaggaggcgctcgagcggtacgcacagcccaagtac
ggcgccaggcgcgcatccagcgctctgaaggagttcgacgccgacccggtcagcggcaag
ccgatcaagatcaaggacggccgcttcggtgcctacgtcaccgacggtgagacgaacgcg
accatcccgcgcggcgagacggtcgacgacgtcgacttcgagcgggcgaagcagctgctc
gccgacaagcgcgccaagggccctgcgcccaagcgcacctcggcgcgcaagacgaccact
cgcaagacgcccgcgaagaagtga
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