Mycobacterium tuberculosis variant bovis BCG Mexico: BCGMEX_3528
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Entry
BCGMEX_3528 CDS
T01727
Symbol
rmlC
Name
(GenBank) Putative dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mbm
Mycobacterium tuberculosis variant bovis BCG Mexico
Pathway
mbm00521
Streptomycin biosynthesis
mbm00523
Polyketide sugar unit biosynthesis
mbm00541
O-Antigen nucleotide sugar biosynthesis
mbm01100
Metabolic pathways
mbm01110
Biosynthesis of secondary metabolites
mbm01250
Biosynthesis of nucleotide sugars
Module
mbm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mbm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
BCGMEX_3528 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BCGMEX_3528 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BCGMEX_3528 (rmlC)
Enzymes [BR:
mbm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
BCGMEX_3528 (rmlC)
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Gene cluster
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Motif
Pfam:
dTDP_sugar_isom
FdtA
Motif
Other DBs
NCBI-ProteinID:
AET20796
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Position
3843766..3844374
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AA seq
202 aa
AA seq
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MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRG
LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHG
FLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDV
RASGLLPRWEQTQRFIGEMRGT
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacgcgaactcgacgtccccggcgcctgggagattaccccgaccatccatgtc
gattcccgcggactgttcttcgaatggcttaccgatcatgggttccgcgcattcgcaggt
cacagtttggacgtccggcaagtgaactgctcggtgtcatcggccggtgtgctgcgcggc
ctgcactttgcccagttgccgccgagccaggccaagtatgtgacctgcgtttccggctcg
gtgttcgatgtcgtcgtcgacatccgagagggctcaccgacattcggccgatgggactcg
gtgctgctcgacgaccaagaccgtaggacgatctacgtctccgaaggcctagcgcacggc
ttccttgcactgcaagacaattcgacggtgatgtacttgtgctcggcggaatacaatccg
cagcgcgagcacaccatctgcgccacagatccgacgttggcggtcgattggccgctggtc
gatggcgctgcccccagcctgtccgaccgtgatgccgctgcgcccagcttcgaggatgtg
cgcgcgtctggcctgctgcccaggtgggaacagacgcagcggttcattggggagatgcgc
ggcacctag
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