Mycoplasmopsis bovirhinis: CO229_03355
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Entry
CO229_03355 CDS
T06002
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mboh
Mycoplasmopsis bovirhinis
Pathway
mboh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mboh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CO229_03355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mboh03400
]
CO229_03355
DNA repair and recombination proteins [BR:
mboh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CO229_03355
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CO229_03355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
DUF87
AAA
P-loop_SecA
AAA_7
AAA_30
DUF3536
AAA_22
DUF5364
HPF1
Motif
Other DBs
NCBI-ProteinID:
ATO31163
UniProt:
A0A2D1JMM6
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All DBs
Position
complement(793854..795830)
Genome browser
AA seq
658 aa
AA seq
DB search
MNSEFKPGGDQPKAIEFLTKGIKNNQEHQVLLGVTGSGKTFTIANIIQNFERPVLVLSHN
KTLASQLYSELKGFFPDNAVEYYISYFDYYRPEAYIASSDTYVEKDSKTNQQIEIMRMKT
VNSLLTRKDVIVVASVSAIYGALNPEIYSQSFLNFYVEQEISVAEFSRKLVNIKYDRNDV
SELSSGQFSVKGDIVIIRPADSETQAIQISFWGDFIEEISLVDSLTKETLKDLKVYILSP
GDAYAAENSIYDQIIPKIQNELTEQLTYFTEKNKLLEKERLSQRVKNDINDLKEFRMCKG
IENYSMYLDGRNFGQRPYTLLDYFPKDSLIFIDESHITVPQINAMISGDQSRKRSLVDFG
FRLPSALENRPLSLKEFEDEFEFKKIYVSATPSNYELTKSNEQVFKMYVRPTGLVDPEII
IKPTKNQVEDIFLILEEQKQKNERTIILTTTKESSEKLSEYMQKRNVKAAYIHSEHTIFE
RNEIIRKLRLGSYDVIIGINLLREGVDIPEVSKVLILDADKGGFMRSETNLIQIVGRASR
NVNGQAILYADTVSEAMQKCILDNQEKRKIQIEYNLKNNIIPKSVSKKIPSALTDKNISS
WVTKILKSKTKTKKSNKITVINELTKEMLKAASERDYVKAQEIKDLIFELESEGEINV
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ttaaactctgaatttaaacctggtggcgatcaacctaaggcaatagaatttttaacaaaa
ggtataaaaaataaccaagaacaccaagtcttacttggtgttactggttctggtaaaaca
tttacaattgcaaatattatacagaattttgagcgacctgttttagttttatctcataat
aaaactttagctagtcagttatatagtgaattaaaaggtttttttcctgataatgcagtt
gaatattatatctcatattttgattattatcgccctgaagcctatattgcaagtagtgat
acatatgttgaaaaagattctaagacaaatcagcaaattgaaattatgagaatgaagaca
gttaattctttattaactagaaaagatgttattgttgttgctagtgttagtgctatttat
ggagctttgaatcctgagatttattcacaaagttttttaaatttttatgttgagcaagaa
atttcggttgctgaattttcacgcaaactagttaatattaaatatgatcgtaatgatgtt
agtgaattatctagtggtcaattttcagttaaaggtgatattgtaattattaggcctgct
gattcagaaactcaagctatacaaattagtttttggggagatttcattgaagagatttct
ttagttgattcattaactaaagaaacattaaaagatcttaaagtatatattttatcacct
ggggatgcttatgcagcggaaaactcaatttatgatcaaattattccgaaaattcaaaat
gaattaactgagcaattaacttattttactgagaaaaataagcttttagaaaaagaaaga
ttatcacaaagagttaaaaatgatattaatgatttaaaagaatttagaatgtgtaaagga
attgaaaactattcaatgtatttagatggaaggaattttggtcaaaggccttatacttta
cttgattattttcctaaagattcattaatatttattgatgaatcacatattactgttcct
caaatcaatgcaatgattagcggagatcaatctaggaaaagaagcttagtggattttggt
tttagactaccatcagccttagaaaatcgtccattgtctttaaaagaatttgaagatgaa
tttgagtttaaaaaaatatacgtttcagcaacaccaagcaactatgagttaactaagtca
aatgaacaagtttttaaaatgtatgtaaggccaacaggacttgttgaccctgaaattatt
attaaaccaacaaaaaaccaagttgaagacatttttttaattttagaagagcaaaaacaa
aaaaatgaacgtacaattattttaacaacaactaaggaatcttctgaaaaactctctgaa
tatatgcaaaaaagaaatgttaaagctgcttacattcattctgagcacactatttttgaa
cgtaatgaaataattagaaagttaaggcttggtagttatgatgtaattattggaattaat
ttattacgtgaaggagtcgatattcctgaggtttcaaaagttttaatattggatgctgat
aaaggtggttttatgcgcagtgaaactaaccttattcagattgttggtagagcttcaagg
aatgtaaatggtcaagcaattttatatgctgataccgtttcagaagcgatgcaaaaatgc
attttagacaatcaagaaaaaagaaaaatacaaattgaatacaatctaaaaaataatata
atacctaagtctgtaagtaagaaaattcctagcgctcttacagacaaaaatattagcagc
tgagtaactaaaatcctaaaaagtaaaactaagacaaaaaaatcaaataaaattacagtt
attaatgaacttaccaaggaaatgctaaaagctgctagtgaaagagattatgtgaaagct
caagaaattaaggatttaatttttgagcttgaatcagaaggagaaatcaatgtataa
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