Maize bushy stunt phytoplasma: MBSPM3_v1c2660
Help
Entry
MBSPM3_v1c2660 CDS
T04456
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mbp
Maize bushy stunt phytoplasma
Pathway
mbp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MBSPM3_v1c2660 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbp03400
]
MBSPM3_v1c2660 (uvrB)
DNA repair and recombination proteins [BR:
mbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MBSPM3_v1c2660 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MBSPM3_v1c2660 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_19
AAA_7
AAA_30
AAA_5
AAA_22
AAA
P-loop_SecA
FPRL1_inhibitor
ORC6
AAA_16
CbiA
AAA_11
Pannexin_like
Motif
Other DBs
NCBI-ProteinID:
AOF54783
LinkDB
All DBs
Position
290404..292416
Genome browser
AA seq
670 aa
AA seq
DB search
MSLTNLFKLQSSLKPSGDQPQAIQKLVNNFKQGLQEQILLGATGTGKTFTIANIIQHLQQ
KTLVIAHNKTLAGQLYNELKAMFPNNRVEYFISYYDYYQPEAYVASSDTYIEKDSKINDE
IDQLRHSAAGSLLNRDDVIVVASVSCIYGVGDLKDYQKSTLHLQIGDKYERQALINKLIE
LKYQRNEINFQRGTFRVRGDIIEIIASSNKENGIRIIFFGNEIENIQNFDVLNGKAITNL
KLITLFPASLYATNTQKLQESIKRIRQELKEQINHFEKTNQLLAAQKIKIRTLHDLEMLE
QIGNCNGVENYSRHLALKEKGEAPSTLIDFFGNEFLTIIDESHVTIPQIKGMYFGDFSRK
TNLVNFGFRLPSALDNRPLKFHEFQAKMNKVIYLSATPGNYELTKKIPIVEQIIRPTFVL
DPEIEIRPTHNQMDDLYFEIKHQTKNNQRILITTLTINMSEDLTAYLKNLCIKVAYLHSE
IKSLQRLEILKDLRLGKYDCLVGVNLLREGLDLPEVALVAILDADKQGFLRNERSLIQTI
GRAARNITGKVIMYADCISPAMQIAIEETYRRRKIQQQYNETMKVTPTALKKTILETISI
KQKESDQNENENGKVKGQKKLQTHTNITAKNKEIKRLQKMMKEAAKTLDFEKAATLRDLI
LELEKKGKKD
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaacaaatttatttaaattgcaaagttctttaaaaccaagtggcgaccaaccc
caagcaattcaaaaattggttaataattttaaacaaggtttacaagaacaaattcttttg
ggagctactggcactggaaaaacttttaccattgcaaatattattcaacatttacaacaa
aaaactttggttattgctcacaacaaaacattagcaggacaactctacaacgaattaaaa
gccatgtttcccaacaatcgcgtagaatattttatttcttattatgattactaccaacca
gaagcatatgtagcatcaagcgacacttacattgaaaaagactccaaaatcaacgatgaa
attgatcagttgcgtcatagtgccgcaggttcattacttaaccgcgatgatgtaattgta
gttgcttcggtttcgtgcatttatggagtaggcgaccttaaagattatcaaaaatcaaca
ctacatttacaaattggagataaatacgaaaggcaagcattaattaacaagttaatagaa
ttaaaatatcaaagaaatgaaattaattttcaaagaggaacttttcgagtaagaggtgac
attatagaaattattgcctcatctaacaaagaaaatggtatccgcattattttttttggc
aatgaaattgaaaatattcaaaattttgatgttttaaatggcaaagcaattacgaatctt
aaattaattactctttttcctgctagtctatatgctacaaatacccaaaaattacaagaa
agtatcaaaagaattcgccaagaattaaaggaacaaattaatcattttgaaaaaactaac
caacttttagcagcccaaaaaattaaaattcgcactttacatgatttagaaatgttagaa
caaataggcaattgcaatggtgttgaaaattattcaagacatttagcactcaaagaaaag
ggcgaggcaccatcaactttaattgatttttttggaaatgaatttttaaccattattgat
gaatctcatgtaactattccccaaattaaaggaatgtattttggtgatttttctcgtaaa
accaacttagtaaatttcggtttcagactaccaagtgcccttgataacagacctttaaaa
ttccatgaattccaagccaaaatgaataaagttatctatctttcagctactcctggcaac
tatgaattaactaaaaaaatccccattgtagaacaaattataagacctacttttgtcctt
gatccagaaattgaaataagaccaacccacaaccaaatggatgacctttactttgaaatt
aaacaccaaactaaaaataatcaaagaattttgataactactttaactattaatatgagc
gaggacctaactgcttatttaaaaaatttatgcatcaaagtagcttatttacacagtgaa
attaaatctttacaaagacttgaaattttaaaagatctaaggttgggaaaatatgattgt
ttggtgggagttaatcttttgagggaaggacttgacttacctgaagtagctttagtagct
attttggatgctgacaaacaaggttttttaagaaacgaaagaagccttatccaaactatt
ggaagagcagctagaaacattacaggcaaagttattatgtatgctgattgtatttctcct
gctatgcaaattgctattgaagaaacttatcgtagaagaaaaatccaacaacaatacaac
gaaacaatgaaagtaacaccaactgctcttaaaaaaactattttagaaacaatttcaata
aaacaaaaagaaagtgaccaaaatgaaaatgaaaatggtaaagttaagggacaaaaaaag
ttgcaaacacatacaaatattacagctaaaaataaagaaattaaacgtttacaaaaaatg
atgaaagaagctgccaaaacccttgattttgaaaaagcagctacattaagagatttgatt
ttggagttagagaaaaaaggcaaaaaagattaa
DBGET
integrated database retrieval system
