Monosiga brevicollis: MONBRDRAFT_34200
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Entry
MONBRDRAFT_34200 CDS
T01042
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
mbr
Monosiga brevicollis
Pathway
mbr03022
Basal transcription factors
mbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mbr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MONBRDRAFT_34200
09124 Replication and repair
03420 Nucleotide excision repair
MONBRDRAFT_34200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbr03021
]
MONBRDRAFT_34200
03400 DNA repair and recombination proteins [BR:
mbr03400
]
MONBRDRAFT_34200
Transcription machinery [BR:
mbr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MONBRDRAFT_34200
DNA repair and recombination proteins [BR:
mbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MONBRDRAFT_34200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
5894858
NCBI-ProteinID:
XP_001749560
JGI:
34200
UniProt:
A9VA65
LinkDB
All DBs
AA seq
417 aa
AA seq
DB search
MMAHLLDELLLKQPEAFVELVYAEPAAVLSIYQRLSGPARHLLLRFLYQPDATLDKKQFA
AYFLKDEDAETVRIELTQRFLLKTMTDGMLTFGSVFLDSLRTALAGRTDAPDQAMPPPKK
ASEVTPAFLEEHSRVSWEAILSYMTTNAELKNSTMILILQEAQLIVNDQPPISVTPEGFQ
FLLQDRANQVWLLIVTFLKLLSREEPIPGEGLPMHEALVLLFRIGLGRLNEVSVLEFSAE
NLTTMQITFLRQLHYMGVVYHRNRKSKRFFLTPYAVMLYHNAELALSQTETGFLLAETNF
HVYAYTDSAVKVALLSKFATLTYRLPIMTTAIITRTSVRRALSQGITADQILRFMQRSSL
LLRHHDETAPTRPTSPQHATPYSCMLLSPPSFDFFKHGLIQIGACEPHDASQEQEPK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcacctcttggatgagctgcttttgaagcagccagaggcctttgtggagctc
gtgtatgccgagcctgcggccgtcctctccatctatcaacgcctctcgggcccggcccgg
catttactgttgcgctttctgtaccagcccgatgcaactctggacaagaagcagtttgca
gcctactttctcaaagacgaggacgccgaaactgtgcgcatcgagctcacgcagcgcttt
ctgttgaagaccatgacggatggcatgctcacctttggctctgtcttcctggattctctc
cgaactgcactggctggccgcacggacgccccagatcaggccatgccgccgccgaaaaag
gcctccgaagtcacgcctgcgtttttggaagaacattctcgtgtcagctgggaggccatc
ctcagctacatgacaaccaatgccgagctcaagaacagcaccatgattttgatattgcaa
gaggcgcagctcattgtcaacgatcagccacccatctctgtgacgccagaaggcttccag
tttcttttgcaggatcgagctaaccaagtgtggctgctcattgtcacttttctcaaactt
ctctcccgggaagagcccatacccggggagggcctgcccatgcacgaagcgcttgttctc
ctttttcgcattggcctgggccgtttaaacgaggtatccgtcttggaattctctgccgag
aatctgaccacgatgcagattacgtttctgcgccaacttcattacatgggtgtcgtctat
caccgcaaccgtaaatccaagcgtttctttttgaccccttatgctgtcatgctctaccac
aatgccgagctcgcgctctctcaaaccgagaccggctttctcttggctgaaacaaacttt
cacgtgtatgcctacacggacagcgcagtcaaagtggctctcctctccaagtttgcaacg
ctgacgtatcgtcttcccatcatgaccaccgccatcatcacccgtacttcggtgcgtcga
gccctaagccaaggcattactgccgatcaaatattgcgcttcatgcagagatcctcgttg
ttgctccgccaccatgacgagacagcacccactcgacccacctcgccacaacacgccacg
ccctattcgtgcatgcttctctctcctccctcttttgactttttcaaacatgggctaatc
caaataggtgcatgcgagccccatgatgcgagccaagaacaagaacccaaatga
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