Methanosarcina barkeri MS: MSBRM_2918
Help
Entry
MSBRM_2918 CDS
T03838
Name
(GenBank) ATP-dependent DNA ligase
Organism
mby
Methanosarcina barkeri MS
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID:
AKB55916
UniProt:
A0A0E3LP52
LinkDB
All DBs
Position
complement(3816591..3817844)
Genome browser
AA seq
417 aa
AA seq
DB search
MLEAFSIAFTGDEKYVVKIKESYSVCTDIGELAESLAEHGPKALGRFSIKLGRPVRSMLA
QRVETFEELEERIPGKKAAEEKYDGERVQIHKNGEEVKAFSRRLEDITAQYPDVVEAVRK
GILAEKIVLDGEIVAYVEGRKADDSTGEFYSFQRLMKRRRKYEVQKYAEICPVAVFFFDI
LYLEGNSLLKKSYPERRAILEKYVKESEILRLARRIVTDNLEEIEDFFNEALEKKLEGII
IKSMDRNSIYEAGKRSWLWLKWKEEYASGMRETFDLAIVGKYYGRGKRKGSFGSLLCAIL
NEEEQRFETFTKVGTGFTEEDAKEIDSLLSEHIISEVPKNVLIKSRMLPDIFVEPSLVIE
VLGSEITESPSHTAGQGKGNTGLALRFPRFLRIRHDKGLYDITTLTEVRNLKEGRGI
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgaggcattttctatcgcttttacaggggacgaaaaatatgtcgtcaagatcaaa
gaaagctatagcgtttgtactgacatcggagagcttgcagaatcccttgcagaacacggt
ccgaaagctcttgggcgcttctccataaaacttggccggcctgtaaggtcaatgcttgcg
cagcgcgtggaaacctttgaagagcttgaagaacgaattcccggaaaaaaagcagccgaa
gaaaaatatgatggggagagagtgcagatccataaaaacggagaagaggttaaagctttt
tctcgaaggcttgaagatataactgcccagtatcccgatgttgtggaagcagtcaggaaa
ggcattcttgcagagaaaatcgtgcttgatggggaaatcgttgcatacgttgaaggcagg
aaagcagacgattcaactggagaattttattcattccagagactaatgaagaggcgcaga
aagtatgaggtccaaaaatatgctgaaatttgccctgttgccgtattctttttcgatatc
ctgtacttggaaggaaattcgcttctgaaaaaatcttacccggaaagacgagctatcctt
gagaaatatgtaaaggaatcagaaattcttcgccttgctagaagaattgttacggataat
cttgaagaaatagaggactttttcaacgaggctctggaaaagaagcttgaaggaattata
atcaaatctatggatcggaattctatttacgaagccggaaaaaggagctggctctggctc
aaatggaaagaagaatatgccagcgggatgagagagacctttgaccttgcaattgtaggg
aaatattacggacgaggaaaaaggaaaggttcatttgggtctctcctctgtgcaattctt
aatgaagaggaacagcgttttgaaacttttacaaaagttggaaccgggttcacagaagag
gacgcgaaagaaatcgacagcttactttcagagcatattatttctgaagtccctaaaaat
gtactcataaaaagtagaatgcttccggatatctttgtagaaccgtctctggttattgaa
gtccttggttcggaaattactgaaagcccgagtcacactgccgggcagggaaaaggaaat
accgggcttgctctgcgttttcctcgctttttacgcataagacatgataaaggactttat
gatattactacacttacagaagtccggaatttaaaggaaggcagaggcatttga
DBGET
integrated database retrieval system
