Mytilus californianus (California mussel): 127700426
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Entry
127700426 CDS
T08804
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
mcaf
Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcaf03041
]
127700426
03016 Transfer RNA biogenesis [BR:
mcaf03016
]
127700426
Enzymes [BR:
mcaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127700426
Spliceosome [BR:
mcaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127700426
Transfer RNA biogenesis [BR:
mcaf03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
127700426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Motif
Other DBs
NCBI-GeneID:
127700426
NCBI-ProteinID:
XP_052059839
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MTAFEEMAVMPELGQAVEEMDWSLPTDVQSEAIPMILGGGDVLMAAETGSGKTGAFCMPI
LQIVYETLKDQQEGKGGKLLTKAHGGGGKWKMNVYDRGDAMAIDPEGSLCQARDPQGWHG
TRSNKAVTGKGKYYYEAEVTDEGLCRVGWSTDKASLDLGTDKFGYGFGGTGKKSYGKQFD
SYGEAYGMNDVIGCYLDLENGDIKWSKNGVDLGKAYNIPQHLRTERFFAAVVLKNAEMSF
NFGGHPFKFPPQKGTYVGLKQAPQKDVIESRIMGSGAVNAKPAPNAPQAIIIEPSRELAE
QTFTQIQKFKVHLSNPSIRELLIIGGVNVKEQVDVLQKGVDIVVGTPGRLEDLISTGKLT
LHQVRFFVLDEADGLLSSGYGDLINRLHGQIPKVTNDGKRLQMVVCSATLHSFDVKKMAE
RLMYFPTWIDLKGADAVPETVHHVVCNVDPTTDPRWKSLQKHIQTDEVHARDKISANSNT
AETLSEAIKILKGEYVVTAIDEHNMDAAIIFCRTKIDCDNLERYLGDRGRGKYSCVCLHG
DRKPQERKANLEKFKQKKVRFLICTDVAARGLDISKLPYVINVTLPDEKQNYIHRIGRVG
RAERMGLAISLVGTVKEKVWYHSNCNTRGKGCYNTNLTDYGGCCIWYDEPKLISDIQEHL
DITIDSVKPDMKVAINEFDGKVTYGQRRKVGGGSYKGHIETLAPAVKELAELEKRAQTSF
IDLKYRKKFMTR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgacagcttttgaagagatggctgtgatgcctgaattaggccaagctgtagaggaaatg
gactggagtcttccaacagatgtacagtcagaagctattcccatgatccttggaggaggt
gatgttctgatggctgcagaaactggcagtggtaaaactggtgccttttgtatgcccatc
ctccagatagtgtatgagaccttaaaagatcaacaggaaggaaaaggtggaaaactacta
accaaggcacatggtggaggaggcaagtggaagatgaatgtctatgacagaggtgatgct
atggctattgatccggagggttccctttgtcaggcaagagatcctcaaggatggcatggt
acaagatccaacaaggctgttacaggcaaagggaaatattactatgaggcagaggttact
gatgaaggattgtgtagagtaggttggtccacagataaagcttcacttgatttaggtaca
gataaatttggttatggatttggtggaacaggaaagaaatcctatggaaaacagtttgat
agttatggagaggcctatggtatgaatgatgtgattggttgttaccttgaccttgaaaat
ggagacatcaaatggtcaaaaaatggtgttgatctaggtaaagcatataatataccacaa
catttacgaacagaaagattttttgctgctgttgtcctaaagaatgctgaaatgagtttt
aattttggaggacatcccttcaagttcccaccacagaaaggaacatatgtaggacttaaa
caagctccacagaaagatgttattgaatccaggattatgggttcaggagctgtgaatgct
aaaccagcacccaatgcaccacaagctattattatagaaccttcaagagaattagcagaa
cagactttcacacagattcaaaagttcaaagttcatttatcaaacccatcaatcagagag
ctgttaattattggtggtgtcaatgtgaaagaacaagttgatgtgcttcagaaaggggta
gatattgtagtaggtaccccaggacgtttagaagatttgatatctacagggaaattgaca
ttacatcaagttagattctttgttctagatgaagcagatggattgttgtcctctggttat
ggtgaccttattaatagattacatggacagattcccaaggtcacaaatgatggaaaaaga
ttacagatggttgtttgttcggcaacgcttcactcatttgatgtcaaaaagatggctgaa
cgattaatgtatttcccaacctggattgatctgaagggagcagatgctgttcctgaaact
gtccaccatgtggtttgcaatgtagatccaacaacagatccaagatggaaaagtttacag
aaacacatacagacagatgaagttcatgctagagacaaaatcagcgctaactcaaataca
gcagaaaccctctcagaagctataaaaatactgaagggagaatatgttgttacagcaatt
gatgaacacaacatggacgctgctattattttctgtaggacaaagatagattgtgataat
cttgaaagatatcttggagacagaggcagaggaaaatatagttgtgtttgtctccatggt
gacagaaaaccacaagaaagaaaagccaatttggagaaatttaagcaaaagaaagtgcgg
tttttgatctgtacagatgtagcagcacgtggactggatatttccaaacttccttatgta
attaatgtgacactgccggatgagaaacagaattatatccatagaattggtcgtgtaggt
agagcagaaagaatgggattggcaatatcacttgtaggaacagtcaaagaaaaagtatgg
taccattctaactgcaacacaagagggaaaggatgctataacacaaatctgactgattac
ggtggatgttgtatctggtatgatgaaccaaagttaatatcagatatacaggagcacctt
gatataaccattgattcagtaaagcctgatatgaaagttgctattaatgaatttgatggc
aaagtaacatatggccagaggaggaaagttggaggtgggtcgtacaaaggtcacatagaa
acattggctcctgctgttaaagaattggcagaactagaaaagagagctcagacgtcattt
atagatcttaaatacaggaaaaagttcatgactagataa
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