Mytilus californianus (California mussel): 127706492
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Entry
127706492 CDS
T08804
Name
(RefSeq) transcription elongation factor SPT5-like
KO
K15172
transcription elongation factor SPT5
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127706492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcaf03021
]
127706492
03019 Messenger RNA biogenesis [BR:
mcaf03019
]
127706492
Transcription machinery [BR:
mcaf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
127706492
RNA polymerase I system
127706492
Messenger RNA biogenesis [BR:
mcaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
127706492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
Spt5-NGN
Spt5_N
DUF3912
Arabino_trans_N
Motif
Other DBs
NCBI-GeneID:
127706492
NCBI-ProteinID:
XP_052067104
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MSDSEEEGSVYSGSAPGSPAGSGSPPGSPAGSESGPGSPAGSGAEELSGAEEDLPQKRVR
KQRVVSDDEEDEDEYDSEEDEDYAVDRHASKRKKKKPRAGGFIIEEADVDDEGDEDDDEE
WEDGVDQTMIDRQSTYGPSAREIDENRRYEQMISTQREDEIEEYYRQKYGEGSASARYGE
GEEMSDEITQQGLLPGVKDPNLWLVKCRIGEERTTAIQVMRKYIAYQFEDEPLQIKAVIS
KESLKGYIYVEAYKQTHVKQAIEGIGNLRMGIWAQQMVPIKEMTDVMKIVKESAQLKPRS
WVRLKRGVFKDDLGQVDFVEPAQNYVHLKLIPRIDYTKPRGFAKTKDNQAEKRKKKRRPA
QKLFDPDAIRGIGGEITQDGDFLVFENNRYSRKGFLFKNFIMSAIIAEGVKPTLAELEKF
EDQPDGVDVELIQEKPAGEVTHNFIPGDVVEVSEGELVHLQGKIISIDGNKITMLPKHED
LKDPLEFQASELKKHFKMGDHVKVIQGRFEGDTGLIVRVEDNMVVLFSDLTMHELKVLPK
DLQLCADMATGVDSLGQFQFGDLVMLDPQTVGCIVRLEKENFQVLNMHNKVVNVKPASIT
RKKDTKHAVALDSENNNVQVKDIVKVIDGPHSGRSGEIKHLYRSFAFLLSRMMTENGGYF
VCRTRHLVLAGGSKTNTSGLSVTGFSPMSPRLSSPAHPDSGGGGAPSMGRGGGGGAGRGG
LTKRDKELIGQTVRIIQGPFKGYIGIVKDATESTARVELHSSCKTISVDKNRLASLTGGR
PKDGSTSAYGRTPVYGGQTPMYGSRTPMYGSQTPLHDGSRTPHYGSQTPSHEPGNRTPGQ
SAWDPANPNTPARVNDFDYNFESPSPGNYDTPNPATPGYPADTPSPIGGPFTPQTPGTSY
SPYGGQSSASPGSYHSPSPAGGGFGGSSPSPLGYQTSPSPGFNAGTPSPMGYSPMTPGAP
YTPQTPGMFMDHGMSDWHTTEIEVKIKETHDDTNLIFQKGQIRSVSGGMCSVYVTEQDKV
INIASEHLEPIPPEVGDKAKVITGDERETVGTLLSIDSGEGVLKTEDSQIKMLPLRYLCK
ASGH
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatagtgaagaagaaggtagtgtgtattcaggctctgctccaggtagtcctgct
ggtagtggtagtcctcctgggagtcctgccggaagtgaaagtggtccagggagtccagca
ggaagtggagcagaagaattaagtggagcagaggaagatttacctcagaagagagtaaga
aaacaacgagtggtcagtgatgatgaagaggatgaggatgaatatgattctgaagaagat
gaggattatgcagtagatcgtcatgctagtaaaagaaaaaagaaaaagcctagagctggt
ggtttcatcattgaagaagctgatgttgatgatgagggtgacgaagatgatgatgaggaa
tgggaagatggtgtggatcaaacaatgatcgacagacaatccacatatggaccatcagct
agagaaattgatgaaaatcgtagatatgaacaaatgatcagtactcagcgagaggatgag
attgaggaatattacagacaaaagtatggtgagggttcagctagcgctagatatggagaa
ggagaagaaatgtctgatgaaattacgcagcaaggattgttacctggtgtcaaagatcct
aatttatggttagtaaaatgtagaattggtgaagaaagaactacagccatacaagttatg
agaaagtatattgcttatcagtttgaagatgagccacttcagataaaggctgtgatatca
aaggagagtttgaaaggttatatctatgttgaggcttacaaacagacccatgttaaacaa
gctatcgaaggaattggtaatcttaggatgggaatttgggcacagcagatggttcccatc
aaagaaatgacagatgttatgaagattgttaaagagtcagcgcaacttaaaccaaggtca
tgggtcagattgaaaagaggtgtgttcaaagatgacttaggtcaggttgactttgtagag
ccagcacagaattacgttcatctgaaactgatacccaggatagactacacaaaaccaaga
ggatttgctaaaactaaagataatcaagctgagaaaagaaaaaagaagagaagaccagca
caaaaactgtttgatcctgatgctatcaggggtattggaggggagataactcaagatgga
gactttctggtgtttgaaaataacagatacagcagaaaaggattcctcttcaaaaacttt
attatgtctgcaatcattgcagagggtgtgaagccaacacttgctgaactagaaaagttt
gaggaccaacctgatggtgttgatgtagaattgatacaagaaaagccagcaggggaggta
acccataatttcatacctggtgatgtagtggaagtgagtgaaggtgaattggtccaccta
cagggaaagatcatcagtattgatggtaataagattactatgttaccaaaacatgaagat
ctgaaggatccactagagttccaggctagtgaactgaagaaacattttaagatgggtgat
catgtcaaagtaatacaaggacgatttgaaggagacacaggattaatcgtcagagtagag
gataatatggttgtcttgttttcagatctgaccatgcatgagctgaaggtattacctaaa
gatttacagctttgtgctgacatggcaactggtgttgattctttaggacagttccagttt
ggtgatttagtcatgctcgatccacagacagttggttgtattgtaagattggagaaagag
aatttccaggttctaaacatgcacaataaggtggtcaatgttaagccagcttctataaca
cgtaagaaggacacaaagcatgctgtagccctcgattcagagaacaacaatgtacaagtc
aaagatatagttaaagttattgatggaccacattcaggtagatcaggagaaattaaacat
ttatatagaagcttcgcttttctgctgtcaaggatgatgacagaaaatggaggctatttt
gtctgtaggacaagacatcttgttttggcaggtggttccaagacaaacacatcaggatta
agtgttacaggattctcgccaatgtcaccccgtttatccagtcctgcccacccagacagt
ggtggaggtggtgccccaagtatgggtagaggaggtggaggaggagcaggcagaggtggt
ttgacaaagagggacaaagaactgataggacagaccgttagaattatacagggaccattc
aaaggttatattggtattgttaaggatgccacagagtccacagctagagtggagctacat
tccagttgtaaaacaatatctgtggataaaaatcgtctggcatcactcacaggaggcaga
ccaaaagatggttccacgtctgcatatggcaggacacctgtgtatggtggacagacacca
atgtatggatctcgtactcccatgtatggctcacagacaccattacacgatggatcacgc
acacctcattatggtagtcagacaccatctcatgaaccaggaaatcgtactccaggacaa
agtgcttgggatccagctaaccccaacacaccagccagagtgaatgattttgactacaat
tttgaatcaccgtcacctgggaattacgacacacctaacccggccactccaggttaccca
gctgacacacccagtccaataggaggaccctttacaccacagacaccaggaacaagttat
tctccctatggtggacagtcatcagcctctcctggaagctaccattcacctagtcctgct
ggtggaggttttggtggtagttcacctagtccattagggtaccagacatcaccatcccca
ggcttcaatgcaggaaccccctcaccaatggggtacagtcctatgacaccaggtgcacct
tatacaccacagacacctggaatgtttatggatcatggtatgtcagactggcacaccacc
gagatagaagttaagatcaaggaaacgcacgatgatacaaatcttatattccagaaagga
caaatcagaagtgtttcgggagggatgtgttcagtatatgtgacagagcaggataaagtc
attaatatagcatcagaacatttagagccaataccaccagaagttggagataaggctaaa
gtgataactggggacgagagagaaacagtaggaactttgctcagcattgacagtggagaa
ggtgtactgaaaacagaggactcacagatcaaaatgttacccttacgatatctatgtaaa
gcttctggtcattga
DBGET
integrated database retrieval system
