Mus caroli (Ryukyu mouse): 110290085
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Entry
110290085 CDS
T05910
Symbol
Xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
110290085 (Xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110290085 (Xrcc5)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
110290085 (Xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
DUF6005
Motif
Other DBs
NCBI-GeneID:
110290085
NCBI-ProteinID:
XP_021012233
Ensembl:
MGP_CAROLIEiJ_G0014243
UniProt:
A0A6P5P6V0
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All DBs
Position
1:65923408..66011159
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AA seq
732 aa
AA seq
DB search
MAWSGNKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYG
TDGTDNALAGKDQYQNITVHRHLMLPDFDLLEDIGNKIQPSSQQADFLDALVVCMDLIQR
ETIGKKFGKKHIEVFTDLSSPLSQDQLDVIICNLKESGISLQFFLPFPIDKNGEPGERGD
LNSDLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSECLRQLCVFKKI
ERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKFKKSWVVVDARTLRKEDIQKETVYCLNDD
DETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYRSEGKCFSVLGFCKSSQVHRRFFMGHQ
VLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDKRSNPQVGVAFPYIKDAYECLV
YVQLPFMEDLRQYMFSSLKNNKKCTPTEAQLSAIDDLIDSMSLVKKNEEEDIVEDLFPTS
KIPNPEFQRLYQCLLHRALHLQERLPPIQQHILDMLDPPTAMKAKCESPLSKVKTLFPLT
EVIKKKNQVTAQDIFQDNHEEGPAAKKYKTEKEEGHISISSLAEGNITKVGSVNPVENFR
FLVKQKIASFEEASLQLISHIEQFLDTNETLYFMKSMDCIKAFREEAIQFSEEQRFNSFL
EALREKVEIKQLNHFWEIVVQDGVTLITKDEGPGSTITAEEATKFLVPKDKAKEDTAGLE
EAGDVDDLLDMI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtccggtaataaggcagctgttgtgctgtgtgtggatgtgggggttgccatg
ggtaactcctttcctggtgaagaatctccaattgaacaagcaaagaaagtgatgactatg
tttgtccaacgacaggtattttcggagagcaaagatgagattgcattagtcctctatggc
acagacggcactgataatgcccttgctggcaaggaccagtatcagaacatcacagtgcac
agacacctgatgctaccagattttgatttgctggaagacatcggaaacaaaatccaacca
agttctcaacaagccgacttcctggacgccctggtagtgtgcatggatttgattcagcgt
gaaaccatagggaagaagtttgggaagaagcatattgaagtgttcacggacctcagcagc
ccgctcagccaggaccaactggacgttataatttgtaacttgaaggagtctggcatctct
ctgcagttctttctgccttttccaatcgacaagaatggcgagcctggcgagagaggagac
ctgaactctgacttggatcacctcaaaccctccttccctcaaaaaggacttactgagcag
caaaaggaaggcatccgcatggtgacaagggtgatgctgtcgttagaaggcgaagacggg
ctggatgaaatttattccttcagtgagtgtctacgacaactgtgcgtctttaagaagatt
gagaggcgttccatgccctggccctgccaactgaccattggccccaacttgtctataaag
attgtagcctataaatcgattgtacaggagaaatttaagaagagttgggtagttgtggat
gcaagaacgctaaggaaggaagatatacaaaaagagactgtttattgcctaaacgacgat
gatgaaactgaagtttccaaagaggacactattcaagggtaccgctacggaagtgatatc
attcctttttctaaagtggatgaggaacaaatgaaatatagatctgaggggaagtgcttc
tctgttttgggattttgtaaatcttctcaggttcatagaagattcttcatgggacatcaa
gttctaaaggtctttgcagcaaaggatgatgaggcagcagctgttgccctttcctccctc
gttcatgctttggatgagttaaacatggtcgccatcgtccgatacgcttatgacaaaaga
tctaatcctcaagttggtgtagccttcccttacattaaggacgcctatgagtgtttagtt
tatgtgcagctgcctttcatggaagacttgcggcaatacatgttttcctcgctgaagaac
aataagaagtgcactcccacagaggcacagctgagcgctattgatgatctgattgattcc
atgagcttggtaaagaaaaacgaggaagaagacattgttgaagatttgtttccaacctcc
aaaattccaaatcctgaatttcagcgattgtaccagtgtctgctgcatagagccttacac
ctccaggagcggctgcccccaattcagcagcacattttggatatgctggatccccccact
gcgatgaaagcaaaatgtgagagtccactctctaaagtaaagacccttttccctctaaca
gaagtcatcaagaaaaagaaccaagtgactgctcaggacattttccaagacaatcatgaa
gaggggcctgctgctaaaaaatataagactgagaaagaagaaggtcacatcagcatctcc
agcctggcagaagggaacatcaccaaggttggaagtgtgaatcctgttgaaaacttccgt
ttcctagtaaaacagaagattgccagctttgaggaagcgagtctccagttaataagtcac
atcgaacagtttttggataccaatgaaacactgtattttatgaaaagtatggactgcatc
aaagctttccgggaggaagccattcagttttcagaagaacagcgcttcaacagcttcctg
gaagcccttcgagagaaagtggaaattaaacaattaaatcatttctgggaaattgttgtt
caggatggagttactctgatcaccaaagacgaaggcccaggaagcactatcacagctgag
gaagccacaaagtttctggtccccaaagacaaagcaaaagaagatacagcgggacttgaa
gaagctggcgatgtggatgatttactggacatgatatag
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