Mus caroli (Ryukyu mouse): 110291008
Help
Entry
110291008 CDS
T05910
Symbol
Nup210l
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03013
Nucleocytoplasmic transport
mcal05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110291008 (Nup210l)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110291008 (Nup210l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110291008 (Nup210l)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110291008 (Nup210l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_2
T2SS-T3SS_pil_N
DUF4097
MAPKK1_Int
Motif
Other DBs
NCBI-GeneID:
110291008
NCBI-ProteinID:
XP_021013605
Ensembl:
MGP_CAROLIEiJ_G0025225
UniProt:
A0A6P5PDY7
LinkDB
All DBs
Position
3:82871444..82991808
Genome browser
AA seq
1881 aa
AA seq
DB search
MIAFGAPRPGTFRLLFSLTPHYFFLFLIGTLANKLNVPQVLLPFSREPGRVPFLLEAQRG
CYIWHSTHHDAVTIQPLYENGTSCSQRAVLVAESTQPIRLSSIILAREVVTDHELRCDVK
VDVIDNIEIVSRTRELYVDDAPLELMVRALDSKGNTFSTLAGMVFEWSIAQDNESSREEL
SSKIRILKYSEAEYSPPDYIIEMEKEERQGDVILVSGMRTGAAVVKVRIYEPFYKKVAAA
LIRLLVLENIFLIPSHDTYLLVGAYIKYRVAKMVQGRMTEVNFPLEHYTLELQDHRLTNG
GLPSRTVALLDEKTAMVTAVQLGQTNLVFVHKNVHMRSVSGLPNSTIYVVEPGFLGFSIH
PGGRWSLEVGQVYVITVEVFDKSSTRVYISDNLKITFQFSKEYFEEQLSTSNGSYHVVKA
LKDGVVVINATLTSSLQERNSSQPKTYQISHQQEVKIYFPIQLKPSFLAFPHHPLGISNR
FTVQVEGGSGNFTWSSSNETVAMVTTKGVVTAGQVRGNSTILARDVQNPSRSGDIKVYVM
KLNKMELLPFQADVEIGQIIEVSIAMYHVNTETKEAIAFTDCSHLPLDLNSDKQGVFTLF
KEGIQKPGAMHCSSVHIAATSPGHTLVTVSVTGHEEHVWSSATFAAYEPLKALNPVDVAL
VTWQSVKEMVFEGGPHPWILEPSRFFLELSMEKAEAITVAEVRLPGKRKQNQYVYLVLCL
ELGEQVLTFRIGNHPGVLNPSPSVEKVQVRFICAHPASMLVTPMYKVPAGTQPCPLPQYN
KQLIPVSSLRDSVLELAVFDQHGRKFDNFSSLMLEWKSSNETLAHFEDSKSVEMVARDDG
SGQTRLHGHQILKVHQMKGTVLIGVNFAGYSGKKSPKGISNSPRSAGVELLLVEDVTVQP
ENATIYNHPDVKEIFNLVEGSGYFLINSSEKDIVTITYREAESSVQLVPAHPGFLTLEVY
DLCLAYLGPAVAQIRVADIQEVELDLIDKVEIGKTVLVVVRVLGSSKHPFRNKYFRNMEV
RLQLASAIVTLRLMEDQDEYSENYMLRAVTVGQTTLVAIATDRMGRKFTSAPRHIEVFPP
FRLVPEKMTLIATNMMQIISEGGPQPQSIIHFSISNQTVAVVNRRGQVTGKSVGTAVLHG
TIQTVNEDTGKVIVFSQDEVQIEVVQLQAVRILAAATRLVTATEMPVYVMGVTSTQTPFS
FSNASPSLTFHWSMSKRDVLDLVPRHSEAFLQLPAENNFAMVVHTKAAGRTTIKVTVRSK
NSSFGQLEGNLLELSDEIQILVFEKLQLFYANCQPEQILMPMNSQLKLHTNREGAAFVSS
RVLKCFPNSSVIEEDGGGLLRSGSIAGTAVLEVTSIEPFGVNQTTITGVQVAPVTYLRLS
SYPKLYTAQGRTLSAFPLGMSLTFIVEFYNNIGEKFHTHNTRLYMALNRDDLLLIGPGNR
NYTYMAQAVNKGVTVVGLWDQRHPGMADYIPVAVEHAIEPDTKLIFVGDVICFSTQLVNQ
HGEPGVWMISTNNIVQTDTVTGVGVARSPGTATIFHDIPGVVKTFREVVVNASSRLTLSY
DLKTYLTNTPNATVFKLFISTGRNVNLKGSCTPSQALAVEKVLLPETLMLCHVQFSNTLL
DIPASKVFHIHSEFSVEKGVYVCLIKVRQESEELRQVLSVADTSVYGWATLVSERGKNGM
QRILIPFIPGFYMNQSEFVLGHKDTGELRILGVERVLESLEVFHSSPFLAVSGHKHSMLP
TGLTVYLVRIINFTAFQQISSPAFINVSCALTNQQEAVIVRAKDASGADHCEDSGVFKNF
FGSYQILLFTLFAVLASTSFIFLAYNAFLNKVQTIPVVYVPTIGTTQPGSYTATCSPPHF
LSSRPPLVQSRLQHWLWSIKH
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgattgcctttggggctccgcgacccggaaccttcaggctccttttctccttgactcca
cactacttcttcctgtttttaattgggaccctggccaacaaactcaatgtgcctcaagtg
ttactacctttcagccgggagccaggccgggtgcccttcttgctagaggcgcagcggggc
tgctacatctggcattccactcatcatgatgcagttaccattcagcctttatatgaaaat
ggtacctcgtgctcccaaagggctgttcttgttgctgaatccacccaaccgatacgcctc
agcagcatcattcttgctcgagaagtggtgacggaccatgagctacgctgtgatgtaaag
gtcgatgtgatagacaacattgaaattgtatctcgaacccgggagctgtatgtggacgat
gcaccgctggagcttatggtgagggccctggattctaaaggaaacactttcagtactctg
gcaggcatggtgtttgagtggagtattgcccaggacaacgagtcatcgagggaagagctg
tccagcaaaattaggattctgaaatactcggaagccgagtattctccccctgactatata
attgagatggaaaaagaggagagacaaggagacgtgattttggtatctgggatgagaact
ggggctgctgttgtaaaagtccgaatttatgagccattctacaagaaagtggctgcagcc
ttgatccgcctgcttgttctggagaacatatttcttataccatcccacgatacatatctc
ttagtaggagcctatattaaatacagagtggcaaaaatggttcaagggagaatgacagag
gtaaactttcccttggaacattatacattagaactgcaagaccacagacttaccaatggt
ggacttccgtctagaacagtggctctgttggatgagaaaacagccatggtgactgctgtc
caactgggccaaactaaccttgtctttgtccacaaaaatgttcatatgcgctctgtgtct
ggactcccaaactctaccatatatgttgtagagcctggatttttaggcttcagcatccat
cctggaggccgatggagcctagaggtggggcaggtgtacgtcatcacagtggaagtgttc
gacaagagcagcacaagggtctacatttctgacaacctcaagatcacgttccagttttcc
aaggagtactttgaagagcagttgagtacttcaaacggatcttaccatgtggtaaaagcc
ctgaaagacggagttgtggtgataaatgcaaccctgacctccagccttcaggagagaaac
agttcccagccaaaaacctatcaaatcagtcatcaacaagaggtgaagatatactttccc
attcagcttaaacccagctttctggcctttccccatcatcccctgggaatatcaaatcgg
ttcacagttcaggtagagggaggtagtggcaacttcacctggagctcttctaacgaaacc
gttgccatggttaccaccaaaggggtggtaaccgcgggccaggtgagagggaacagcacc
attttggcacgagatgtacagaatccctctcgatctggagatattaaggtgtatgtcatg
aagctgaacaaaatggaactgttgccatttcaagctgatgtggaaattggccagattatt
gaggtatccattgcaatgtatcatgtaaatacagagaccaaggaggccatcgcattcaca
gactgctcgcacttacccctcgatctcaactcggataagcaaggagtcttcactcttttt
aaagaaggtattcagaagcctggagcgatgcactgttctagtgtccacatagcagccaca
tctccgggccacactctggtgaccgtcagtgtgactgggcatgaagagcatgtgtggagc
agcgccacatttgctgcttacgaacctctaaaggctctaaaccctgtggacgtggctttg
gtgacatggcagtccgtgaaggaaatggtatttgaagggggccctcatccttggatcttg
gagccgtcccgattttttttggagctgagcatggagaaggcagaggccattacagtagca
gaagtccgactgccgggtaagaggaagcagaaccagtatgtctaccttgtgctgtgcctg
gagttaggggaacaggttctcacttttcggatcgggaaccacccgggagtcctaaaccct
agtccctctgtggaaaaggtgcaggtgcgcttcatctgtgcccatcctgccagtatgttg
gtgacaccaatgtacaaggtgccagctggcacccagccatgtcctttgccacagtacaac
aagcaactgattcctgtgtccagcttaagggactcagtcctagaactggcagtatttgat
caacacgggaggaagtttgataatttcagctcactcatgctagaatggaagtcttccaac
gagacactcgctcattttgaagattctaagtcagtggagatggtagccagagacgacggc
agtgggcagacccgactgcacggccatcagatccttaaggtgcatcagatgaaggggact
gtgctcattggagtcaattttgctggttattcagggaagaaaagcccaaaaggaatttcc
aactcgccaagatctgcgggggtagaactgctcctggtggaagacgtcacggtccagcct
gagaatgccaccatctacaaccaccctgatgtgaaggaaatatttaaccttgtggaagga
tctggctactttctgatcaacagcagtgagaaagatatcgtcaccattacttacagggaa
gcagaaagctcagtccagttagttccagcacatcctggatttctaaccctggaagtgtat
gacctgtgcctggcctacttgggtccagcagtggcccagatcagggtggcagacatacag
gaggtcgagctggatctgatcgataaggtcgagatcggtaaaaccgtgttagtggttgtg
agggttcttggctcgtccaaacaccctttccggaacaagtacttcagaaacatggaagta
aggctgcagctggcatctgccatcgtcaccctgagactaatggaagatcaggatgagtac
tctgaaaactacatgctccgtgctgtcactgttggacaaaccacacttgtagctattgcc
acagacagaatggggaggaaattcacatcggcgcctcggcatattgaggtctttcctcca
ttcagactagttcctgagaaaatgaccctgattgcaactaacatgatgcagataatctct
gaaggtggccctcagccccagtccatcattcacttctctatcagcaatcagactgtagct
gttgttaacaggagggggcaagttacagggaaatcagtcggcacggccgtgctccacggt
accatccagacagtgaatgaagacactggcaaagtcattgtgttctcccaggatgaagtc
caaatcgaagttgtccagctccaggctgttaggatccttgcagctgcgacccgactcgtc
acggccactgagatgccggtttacgtcatgggggtgacgagtacccagacccctttctcc
ttcagcaatgccagcccttcgctcacgttccactggtccatgagcaagagggatgtgctg
gacctggtacccaggcattcagaggcatttctacaacttccagctgagaacaactttgcc
atggttgtccacacaaaagcagctggcaggaccacgatcaaggtcacggtccgcagtaag
aacagctcctttgggcagttggaggggaatctgctagagctgtccgatgagattcagatc
ctggtatttgaaaaacttcaacttttctatgcaaactgtcaacctgagcagattctgatg
cctatgaattctcagctcaagctgcacaccaacagagaaggcgcagcctttgtgagttcc
cgtgttctcaagtgtttccctaattcctctgtcattgaagaagatggtggagggctgctg
agatctggatccattgcgggtactgcagtattggaagtcacttctatagaaccttttgga
gtcaatcaaacaaccataactggagtccaggtagcaccagtgacttaccttcgattgagc
agctaccccaagctatacacagcacaaggaaggaccctgtcagcctttcctttgggcatg
tctctcacctttattgttgagttttataataacattggagaaaaattccacacccacaat
actcggctttatatggctctgaacagagatgacttgctgcttattggaccaggaaacaga
aactatacatatatggcccaggctgtgaataaaggggtgacagttgtggggctttgggac
caaagacatcctggcatggcagattacatccctgttgctgtagaacatgccattgagcca
gacaccaagcttatctttgttggagatgtcatctgcttcagcactcagcttgtcaatcag
catggtgagcctggggtgtggatgatttctaccaacaatattgtacagacagacacggtc
actggagtaggagtggctaggagcccaggaactgcaacaatttttcatgacatccctgga
gttgtgaaaacgtttcgagaggtagtagtcaatgcatcatcaagattgacactcagctat
gacctgaagacttacctcaccaatacccccaatgcaactgtattcaaactcttcatcagc
acaggcagaaatgtcaacctcaaaggatcctgtaccccaagtcaggctttggctgttgaa
aaagttcttcttcccgagaccctcatgctatgccatgtgcagttcagcaatactttacta
gacattccagcaagtaaggtctttcacatccattcggaattcagtgtggagaaaggggtc
tatgtctgcctaatcaaggttcgacaggagtccgaggagctgcgccaagtgctcagtgtg
gcagacacctcagtctatgggtgggcaactctggtcagtgaacgtggcaagaatggcatg
caaagaatcctcattcctttcatccctggcttttacatgaaccagtcagagttcgttctt
ggccacaaagacactggggagctaagaatcctgggagtggaaagagttcttgagagccta
gaggtcttccacagctccccctttctggcagtgtctggccataagcactcaatgctcccg
acaggcctaactgtctacctagtaagaataatcaacttcactgccttccagcagatatca
tcccctgctttcattaatgtgtcctgtgcactgaccaatcaacaagaagctgtgatagtc
agagcaaaagatgcatctggtgcagatcactgtgaagactcgggtgtcttcaagaacttc
ttcggttcttaccagatcctcctctttaccctctttgctgtgctggcatcaacttctttc
atctttctagcatacaatgccttcctgaacaaggtacagactattccagttgtttatgtg
ccaacaataggaacaacgcagccaggttcttacacggctacatgttccccccctcacttc
ctgagctcacggccaccactagtgcagagtcggctacaacactggttatggagtataaaa
cactaa
DBGET
integrated database retrieval system