KEGG   Mus caroli (Ryukyu mouse): 110291212
Entry
110291212         CDS       T05910                                 
Symbol
Ubqln4
Name
(RefSeq) ubiquilin-4 isoform X1
  KO
K04523  ubiquilin
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04141  Protein processing in endoplasmic reticulum
mcal05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110291212 (Ubqln4)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    110291212 (Ubqln4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mcal04131]
    110291212 (Ubqln4)
   03051 Proteasome [BR:mcal03051]
    110291212 (Ubqln4)
Membrane trafficking [BR:mcal04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Selective cargos
    110291212 (Ubqln4)
Proteasome [BR:mcal03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    110291212 (Ubqln4)
SSDB
Motif
Pfam: ubiquitin STI1-HOP_DP UBA Rad60-SLD YukD Ubiquitin_5 Rad60-SLD_2 HOIP-UBA Dsc3_N CUE
Other DBs
NCBI-GeneID: 110291212
NCBI-ProteinID: XP_021013876
Ensembl: MGP_CAROLIEiJ_G0025173
UniProt: A0A6P5PHB0
LinkDB
Position
3:81329703..81345890
AA seq 601 aa
MAEPSGAETRPQIRVTVKTPKDKEEIVICDQASVKEFKEEISRRFKAQQDQLVLIFAGKI
LKDGDTLSQHGIKDGLTVHLVIKTPQKAQDPVTAAASPPSTPDSASAPSTTPASPAAAPV
QPCSSGNTTSDAGSGGGPSPVAAEGPSSATASILSGFGGILGLGSLGLGSANFMELQQQM
QRQLMSNPEMLSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELM
RQTMELARNPAMMQEMMRNQDRALSNLESVPGGYNALRRMYTDIQEPMFTAAREQFGNNP
FSSLAGNSDNSSSQPLRTENREPLPNPWSPSPPTSQAPGSGGEGTGGSGTSQVHPTVSNP
FGINAASLGSGMFNSPEMQALLQQISENPQLMQNVISAPYMRTMMQTLAQNPDFAAQMMV
NVPLFAGNPQLQEQLRLQLPVFLQQMQNPESLSILTNPRAMQALLQIQQGLQTLQTEAPG
LVPSLGSFGTPRTSVPLAGSNSGSSAEAPTSSPGMPATSPPSAGSNAQQQLMQQMIQLLS
GSGNSQSCLFQVPMPEVRFQQQLEQLNSMGFINREANLQALIATGGDINAAIERLLGSQL
S
NT seq 1806 nt   +upstreamnt  +downstreamnt
atggcggagccgagtggggctgagacgaggccccagattcgggtcaccgtcaagaccccc
aaggacaaggaggagatcgtgatctgcgatcaagcctcggtcaaggagttcaaggaggag
atctcccggaggtttaaggctcagcaggatcagctggtcctgatcttcgcaggcaagatc
ctcaaggacggggacaccctgagccagcacggcatcaaggacgggctcacagtccaccta
gtcatcaaaacccctcagaaggctcaagatccagtgactgctgctgcttctcctccatct
actcctgactctgcctctgcaccctccaccacgcctgcctcacctgccgccgcccctgtc
cagccctgcagctctggcaatacaacttcagatgctggcagtggaggggggccctctcca
gtggctgcagaggggccctcaagtgctactgcatcgatcctctctggcttcggaggcatc
ctgggcctgggcagcctgggcctgggctccgccaactttatggagctgcagcaacagatg
cagagacagctcatgtccaatcctgagatgctgtcgcagatcatggagaaccccttggtc
caggatatgatgtcaaaccccgatctgatgcgccacatgatcatggctaatccccagatg
cagcagctgatggaaaggaaccccgagatcagccacatgctcaacaacccagagctcatg
aggcagacaatggagcttgctcgtaacccagccatgatgcaagaaatgatgcggaaccag
gaccgggccctcagcaacctggaaagtgtcccgggagggtataatgccctccgccgcatg
tacacggacatccaggagcccatgttcactgctgctcgggaacagtttggcaacaatccc
ttctcttccctggccgggaactccgacaactcatcctcccaacctcttcggactgagaat
cgagagcccctccctaacccctggagcccctcgccccccacctcccaggcccccgggtcc
ggtggggagggcaccggaggatcggggaccagccaggtgcacccgacagtctcgaacccc
tttgggatcaatgcggctagcctggggtcagggatgttcaacagcccagaaatgcaggcg
ctcctccagcagatttctgaaaacccccagctgatgcagaatgtcatctcagccccttac
atgcgcaccatgatgcagacgcttgcccagaaccctgactttgctgctcagatgatggtg
aatgtgccgctgttcgcagggaatccacagcttcaggagcagctccgcctgcagctcccc
gtgtttctgcagcagatgcaaaacccagagtctctctccatcctcaccaatccccgggcc
atgcaggccttgctgcagatccagcagggactgcagaccctccagactgaagcccctggg
ctggtacccagccttggctcctttgggacaccccggacctcggtacctctggcaggcagc
aactctggatcttcggcagaggcccccacttcttccccgggcatgccagccacatctcct
cccagtgcgggttccaatgcccagcaacaactcatgcagcagatgatccaacttttgtcc
ggaagtgggaactcacagtcctgcctcttccaggtgccgatgccagaagtgagatttcaa
cagcagctggaacaactcaattccatgggctttattaaccgtgaggccaacctacaggcc
ctgatcgccacaggaggggacatcaatgccgctattgagagactcctgggctcccagctc
tcctga

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