Mus caroli (Ryukyu mouse): 110296205
Help
Entry
110296205 CDS
T05910
Symbol
Tnfrsf1a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A
KO
K03158
tumor necrosis factor receptor superfamily member 1A
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04010
MAPK signaling pathway
mcal04060
Cytokine-cytokine receptor interaction
mcal04061
Viral protein interaction with cytokine and cytokine receptor
mcal04064
NF-kappa B signaling pathway
mcal04071
Sphingolipid signaling pathway
mcal04150
mTOR signaling pathway
mcal04210
Apoptosis
mcal04215
Apoptosis - multiple species
mcal04217
Necroptosis
mcal04380
Osteoclast differentiation
mcal04668
TNF signaling pathway
mcal04920
Adipocytokine signaling pathway
mcal04931
Insulin resistance
mcal04932
Non-alcoholic fatty liver disease
mcal04936
Alcoholic liver disease
mcal05010
Alzheimer disease
mcal05014
Amyotrophic lateral sclerosis
mcal05022
Pathways of neurodegeneration - multiple diseases
mcal05132
Salmonella infection
mcal05142
Chagas disease
mcal05145
Toxoplasmosis
mcal05152
Tuberculosis
mcal05160
Hepatitis C
mcal05163
Human cytomegalovirus infection
mcal05164
Influenza A
mcal05165
Human papillomavirus infection
mcal05166
Human T-cell leukemia virus 1 infection
mcal05167
Kaposi sarcoma-associated herpesvirus infection
mcal05168
Herpes simplex virus 1 infection
mcal05170
Human immunodeficiency virus 1 infection
mcal05171
Coronavirus disease - COVID-19
mcal05417
Lipid and atherosclerosis
mcal05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110296205 (Tnfrsf1a)
04064 NF-kappa B signaling pathway
110296205 (Tnfrsf1a)
04668 TNF signaling pathway
110296205 (Tnfrsf1a)
04071 Sphingolipid signaling pathway
110296205 (Tnfrsf1a)
04150 mTOR signaling pathway
110296205 (Tnfrsf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110296205 (Tnfrsf1a)
04061 Viral protein interaction with cytokine and cytokine receptor
110296205 (Tnfrsf1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
110296205 (Tnfrsf1a)
04215 Apoptosis - multiple species
110296205 (Tnfrsf1a)
04217 Necroptosis
110296205 (Tnfrsf1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
110296205 (Tnfrsf1a)
09158 Development and regeneration
04380 Osteoclast differentiation
110296205 (Tnfrsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
110296205 (Tnfrsf1a)
05170 Human immunodeficiency virus 1 infection
110296205 (Tnfrsf1a)
05160 Hepatitis C
110296205 (Tnfrsf1a)
05171 Coronavirus disease - COVID-19
110296205 (Tnfrsf1a)
05164 Influenza A
110296205 (Tnfrsf1a)
05168 Herpes simplex virus 1 infection
110296205 (Tnfrsf1a)
05163 Human cytomegalovirus infection
110296205 (Tnfrsf1a)
05167 Kaposi sarcoma-associated herpesvirus infection
110296205 (Tnfrsf1a)
05165 Human papillomavirus infection
110296205 (Tnfrsf1a)
09171 Infectious disease: bacterial
05132 Salmonella infection
110296205 (Tnfrsf1a)
05152 Tuberculosis
110296205 (Tnfrsf1a)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
110296205 (Tnfrsf1a)
05142 Chagas disease
110296205 (Tnfrsf1a)
09164 Neurodegenerative disease
05010 Alzheimer disease
110296205 (Tnfrsf1a)
05014 Amyotrophic lateral sclerosis
110296205 (Tnfrsf1a)
05022 Pathways of neurodegeneration - multiple diseases
110296205 (Tnfrsf1a)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
110296205 (Tnfrsf1a)
05418 Fluid shear stress and atherosclerosis
110296205 (Tnfrsf1a)
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
110296205 (Tnfrsf1a)
04932 Non-alcoholic fatty liver disease
110296205 (Tnfrsf1a)
04931 Insulin resistance
110296205 (Tnfrsf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
mcal04050
]
110296205 (Tnfrsf1a)
04090 CD molecules [BR:
mcal04090
]
110296205 (Tnfrsf1a)
Cytokine receptors [BR:
mcal04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
110296205 (Tnfrsf1a)
CD molecules [BR:
mcal04090
]
Proteins
110296205 (Tnfrsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
T2SSL
Motif
Other DBs
NCBI-GeneID:
110296205
NCBI-ProteinID:
XP_021020453
Ensembl:
MGP_CAROLIEiJ_G0028880
UniProt:
A0A6P5Q1S1
LinkDB
All DBs
Position
6:121048172..121060363
Genome browser
AA seq
452 aa
AA seq
DB search
MGLPTVPGLLLSLVLLALLMGIHPSGVTGLVPSLGDREKRDSLCPQGKYVHSKNSSICCT
KCHKGTYLVSDCPSPGRDTVCRECEKGTFTASQNHLRQCLSCKTCRKEMSQVEISPCQAD
KDTVCGCKKNQFQRYLSETHFLCVDCSPCFNGTVTIPCKETQNTVCNCHAGFFLRESECV
PCSHCKKNQECMKLCLPPSLANVTNPQDSGTAVLLPLVILLGLCLLSFIFISLMCRYPRW
RSVVYSIICRDSVPVKEEKAGKPLTPAPSPAFTPTSSFNPILGFSTPGFSPPVSSTPISP
IFGPSNWHFMPPVSEVVPTQGADPLLYESLCSVPAPTSVQKWEDSAHPQRPDNADLLYAV
VDGVPPTRWKEFMRFMGLSEHEIERLEMQNGRYLREAQYSMLEAWRRRTPRHEDTLEVVG
LVLSKMNLTGCLENILEALRNPAPSSTTRLPR
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgggtctccccaccgtgcctggcctgctgctgtcactggtgctcctggctctgctgatg
gggatacatccatcaggggtcactggactagtcccttctcttggtgaccgggagaagagg
gatagcttgtgtccccaaggaaagtatgtccattctaagaacagttccatctgctgcacc
aagtgccacaaaggaacctacttggtgagtgactgtccgagcccagggcgggatacagtc
tgcagggagtgtgaaaagggcacctttacggcttcccagaaccacctcagacagtgtctc
agttgcaagacgtgtcggaaagaaatgtcccaggtggagatctctccttgccaagctgac
aaggacacngtgtgtggctgtaagaagaaccagttccaacgttacctgagtgagacgcac
ttcctgtgcgtggactgcagcccctgcttcaacggcaccgtgacaatcccctgtaaggag
actcagaacactgtgtgtaactgccatgcggggttctttctaagagaaagtgaatgcgtc
ccttgcagccactgcaagaaaaatcaggagtgtatgaagttgtgcctacctccttcgctt
gcaaatgtcacaaacccccaggactcaggtactgcggtgctgttgcccctggttatcttg
ctaggtctttgccttctgtcctttatcttcatcagtttaatgtgccgatatccccggtgg
aggtccgtagtctactccatcatttgtagggattccgtgcctgtcaaagaggagaaggct
ggaaagcccctaactccagccccctccccagccttcacccccacctccagcttcaacccc
attctgggcttcagcaccccaggctttagtcctcctgtctccagtacccccatcagcccc
atctttggtcctagtaactggcacttcatgccacctgtcagtgaggtagtcccaacccag
ggtgctgaccctctgctctacgaatcactctgctccgtgccagcccccacctctgttcag
aaatgggaagactccgcccacccgcaacgtcctgacaatgcagaccttctgtatgctgtg
gtggatggcgtgcctccaacgcgctggaaggagttcatgcgttttatggggctgagcgag
cacgagatcgagaggctggagatgcagaacgggcgctacctgcgcgaggctcagtacagc
atgctggaagcctggcggcgccgcacgccgcgccacgaggacacgctggaagtagtgggc
ctcgtgctttccaagatgaacctgactgggtgcctggagaatatcctggaggctctgaga
aatcccgccccctcgtccacgacccgcctcccgcgataa
DBGET
integrated database retrieval system