Mus caroli (Ryukyu mouse): 110297275
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Entry
110297275 CDS
T05910
Symbol
Usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X3
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcal01002
]
110297275 (Usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110297275 (Usp47)
Enzymes [BR:
mcal01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110297275 (Usp47)
Peptidases and inhibitors [BR:
mcal01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110297275 (Usp47)
Ubiquitin system [BR:
mcal04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110297275 (Usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Dockerin_1
Motif
Other DBs
NCBI-GeneID:
110297275
NCBI-ProteinID:
XP_021021683
Ensembl:
MGP_CAROLIEiJ_G0030332
UniProt:
A0A6P5PT74
LinkDB
All DBs
Position
7:114300541..114390317
Genome browser
AA seq
1376 aa
AA seq
DB search
MVPGEENQLVPKEIENAAEEPRVLCIIQDTTNSKTVSERITLNLPASTPVRKLFEDVANK
VGYINGTFDLTRGNGVNTADMAPLDHTSDKSLLDANFEPGKKNFLHLTDKDGEPPQMLLE
DSNNVDDSVHDRFIGPLPREGSVASTNDYVSQNYSYSSILNKSETGYVGLVNQAMTCYLN
SLLQTLFMTPEFRNALYKWEFEDSEEDPVTSIPYQLQRLFVLLQTSKKRAIETTDVTRSF
GWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINELYQGKLKDYVRCLECGYEGWR
IDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFL
HFPYLLTLQLKRFDFDYTTMHRIKLNDRMSFPEELDMSTFIDIEDEKSPQTESCTDSGAE
NEGSCHSDQMSNDFSTDDAVDEGICLESNSGSEKISKPGLEKVEMAETDQRKDPIQFQLG
EPNSLMYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSRITQEDIKKTHGGSS
GSRGYYSSAFASSTNAYMLIYRLKDPTRNAKFLEVDEYPEHIKNLVQKERELEEQEKRQR
EIERNTCKIKLFCLHPVKQVMMENKLEVHKDKTLKEAVEMAYKMMDLEDVIPLDCCRLVK
YDEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRKPDQIFQSYKPGEVMVKVHV
VDLKAETVAAPVTVRAYLNQTVTEFKQLISKATHLPADSMRIVLERCYNDLRLLSMPSKT
LKAEGFFRSNKVFVESSETVDHQAAFTDSHLWKLLDRHANTIRLFVLLPEQSPGSYSKRT
AYQKAGGDSGNVDDDCERVKGPAGNLKSVDAILEESTEKLKSLSLQQQQQDGDNGDSSKS
TETSDFENIESPLNERGSSTSVDNRELEQHIQTSDPENFQSEERSDSDVNNDRSTSSVDS
DILSSSHSSDTLCNADSAQIPLANGLDSHSITSSRRTKANEGKKETWDTAEEDSGTDSEY
DESGKSRGDMQYMYFKADPYTADEGSGEGHKWLMVHVDKRITLAAFKQHLEPFVGVLSSH
FKVFRVYTSNQEFETVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVCQLLVNEQEPCK
FLLDAVFAKGMTVRQSKEELIPQLREQCGLDLSIDRFRLRKKTWKNPGTVFLDYHIYEED
INISSNWEVFLEVLDGVEKMKSMSQLAILTRRWRPAEMKLDPFQELVLESNSVDELREKL
SEISGIPLEDIEFAKGRGTFPCDISVLDIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRD
RTEEVMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDVAQD
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccggcgaggagaaccaactggtcccgaaggagatagaaaatgctgctgaagaa
cctagagtcttatgtataatacaagacactactaactcgaagacagtgagtgaacggatc
acattaaatttaccagcatctaccccagtccgaaagctctttgaagatgtggccaacaaa
gtaggctacataaatggaacctttgatttgaccaggggaaatggagtcaatactgctgat
atggcaccactggatcacaccagtgacaagtctcttcttgatgctaattttgagccagga
aagaagaactttctgcatttgacagataaagatggtgaaccgcctcagatgttgctggag
gactccaataacgtggatgacagcgtacatgacaggttcataggtccactgccaagagaa
ggttctgtggcctctaccaatgattatgtcagccagaactactcctattcatcaattttg
aacaagtcagaaactggttatgtgggattagtaaaccaggcgatgacgtgctatttgaat
agccttttgcaaacactttttatgactcctgaatttaggaatgcattatataagtgggaa
tttgaagactctgaagaagatcctgtgacgagtatcccataccagcttcaaaggcttttt
gttttgttacaaaccagcaaaaagagagcaattgagaccacagatgttacaaggagcttt
ggatgggatagcagtgaggcttggcaacagcatgatgtacaagaactgtgccgtgttatg
tttgatgctttggaacagaaatggaagcaaacagaacaggctgatcttataaatgagctg
taccaaggcaagctgaaagattatgtgaggtgtctggaatgcggttatgaaggctggaga
attgacacatatcttgatattccactggtcattcgaccttatgggtccagccaagcgttt
gctagtgtggaagaagcattgcatgcatttattcaaccagagatcttggatggcccaaat
caatatttttgtgaacgttgtaagaagaagtgtgatgctcggaagggccttcggtttttg
catttcccctatctgctgaccttacagttgaaaaggtttgattttgattatacaaccatg
catagaattaaactgaatgatcgaatgtcatttccggaggagctggatatgagcacattt
atcgatattgaagatgagaaatctcctcagactgaaagttgcactgatagtggagcagaa
aatgaaggcagttgccacagcgaccagatgagtaatgatttctccacggatgatgctgtt
gatgaagggatatgcctggagagcaatagtgggagtgagaagatttcaaaacctggcctg
gaaaaggtagagatggcggagacagaccagagaaaggatcccatccaattccagcttggt
gaaccaaactccctgatgtatgagctcttctcagtgatggtgcattcagggagtgctgct
ggaggacactattatgcttgcataaagtctttcagtgacgatcaatggtacagtttcaat
gaccaacatgtgagcaggataacacaggaagacattaagaagacacatggtgggtcttca
ggaagcagaggctactactccagtgcttttgcgagctcaacaaatgcatatatgctgata
tacagactgaaggatccaacaagaaatgcaaaatttctagaagtggacgagtacccagaa
cacattaagaatctggtgcagaaggagagagaattggaagaacaggaaaagaggcaacga
gaaattgaacgcaacacgtgcaagataaaattattctgtttgcatcctgtgaaacaagta
atgatggaaaacaagctggaggttcataaggataagacgctaaaggaagccgttgaaatg
gcttataagatgatggatttagaagatgtgattcccttggattgctgtcgcctggtaaaa
tatgatgagtttcatgattacctggaacgatcgtatgagggagaagaagatacaccaatg
gggctgcttctaggaggagtcaagtccacatacatgtttgatctgctgttggaaacgaga
aagcctgatcaaatttttcagtcttacaaaccgggagaagtgatggtgaaagttcatgtt
gttgatctgaaggcagagactgtcgctgctcctgtaacagtgcgtgcatatttaaatcag
acagttacagagttcaaacagctgatctcaaaggccacgcacttacctgcagactccatg
aggatagtgctggagcgctgctacaatgacctgcgccttctcagcatgcccagcaagacc
ctgaaggctgagggcttcttcagaagtaacaaggtgtttgttgaaagctctgagacagtg
gatcaccaggcggcctttacagactcccacttgtggaaactcctggatcgacatgcaaat
acaatccggttatttgttttgctgcctgaacagtctccaggatcatattcgaaaaggaca
gcataccagaaagctggaggtgattctggtaatgtggacgatgattgtgaaagagtcaaa
ggacctgcagggaatttaaagtctgtggatgctattctagaagagagcactgaaaaactc
aaaagcttgtcactgcagcagcagcagcaagatggggacaacggagacagcagcaaaagc
actgagacaagtgactttgaaaacattgaatcccctctcaatgagaggggctcttccacc
tctgtggataatcgagaacttgaacagcacattcagacttctgacccagaaaactttcag
tctgaggaacgctctgactcagatgtgaataatgaccggagtacaagttcggtagacagt
gatattcttagctccagtcacagtagtgacactttgtgcaatgcagacagcgctcagatt
cctctggccaatggactcgactctcacagtatcacaagtagtagaagaactaaagcaaac
gaggggaaaaaggagacctgggacacagctgaagaggactctgggactgacagtgaatat
gacgagagtggcaagagcaggggggacatgcagtacatgtacttcaaagctgacccctac
actgcggacgaaggctctggggaaggacacaaatggttgatggtgcatgttgataagaga
atcaccctggcagctttcaaacagcatttagaaccctttgttggagtcctctcctctcac
ttcaaggtttttcgagtgtacaccagcaatcaagagtttgagaccgtccggttgaatgag
accctttcatcattttcagatgacaataagatcacaatccgactggggagagcactgaag
aagggagagtacagagttaaagtgtgccagctcttagtcaatgagcaagagccatgcaag
tttctgctagacgctgtgtttgctaaaggcatgactgtgcggcaatcaaaagaggagctg
attcctcaactcagggagcagtgtggcttagacctcagcatcgacaggtttcgtctaagg
aagaaaacatggaagaatcctggcactgtctttttggattatcatatttatgaagaggat
attaatatttccagcaactgggaagttttcctggaagttcttgatggtgtggagaagatg
aagtccatgtcacagctcgccatcttaacaagacgctggaggcctgcagagatgaagttg
gaccccttccaggagcttgtgttggaaagcaatagtgttgatgaactccgagagaagcta
agtgagatcagtgggattcctttggaagacattgaatttgccaagggtagggggaccttc
ccctgtgatatttctgtccttgatattcatcaagatttggactggaatcctaaagtctct
accctgaatgtttggcctctttatatctgtgatgatggtgccgtcatattttatagggat
agaacagaagaagtaatggaattgacagatgagcaaagaaatgaattgatgaaaaaggaa
agcagccgactgcagaagacgggacatcgagtgacatactcccctcgcaaagagaaagca
ctcaagatctacctggatggggcaccaaataaagatgtggctcaagactga
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integrated database retrieval system
