Mus caroli (Ryukyu mouse): 110298490
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Entry
110298490 CDS
T05910
Symbol
Blm
Name
(RefSeq) Bloom syndrome protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03440
Homologous recombination
mcal03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110298490 (Blm)
03460 Fanconi anemia pathway
110298490 (Blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcal03032
]
110298490 (Blm)
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110298490 (Blm)
Enzymes [BR:
mcal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110298490 (Blm)
DNA replication proteins [BR:
mcal03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
110298490 (Blm)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
110298490 (Blm)
Bloom's syndrome complex (BTR)
110298490 (Blm)
FA (Fanconi anemia) pathway
110298490 (Blm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BLM_N
BDHCT_assoc
DEAD
BDHCT
Helicase_C
RecQ_Zn_bind
RQC
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
110298490
NCBI-ProteinID:
XP_021023438
Ensembl:
MGP_CAROLIEiJ_G0029907
UniProt:
A0A6P5Q436
LinkDB
All DBs
Position
7:complement(83021026..83101423)
Genome browser
AA seq
1409 aa
AA seq
DB search
MAAVPLNNLQEQLQRHSARKLNNQPSLSKPKSLGFTFKKKTSEGDVSVTSVSVVKTPALS
DKDVNVSEAFSFTESPLHKPKQQAKIEGFFKHFPGRQQSAGTCSEPSLPAMGQPAQDTSC
TTPKTPAVKKLPVAVFKKLEFSSSADSLSDWADMDDFDMSASDAFASLAENPATRVRTAQ
KMKKTKRNFFKPPPHKANAVETDSTPPSPECLQVDLTKEPEEEEAEGAVCLSRDVICLDN
DSASEELPEKGPQESQPLKAHMGAERGDSEKKSHEDKDVFHSVQNTLYFEHNDNDYDIDF
VPPSPEEIISTASSSLKCSSMLNDLDDSGKEKDILSTSEELLSKPEEMTTHKSDAGTNKD
CDAQQISIQQQLIHVMEHICKLVDTVPIDELKALNCGTELLQQRNIRRKLLAEAGFNGND
VRLLGSLWRHRPDSLDNTVQGDSCPVGHPNKELNSPYLLSHSPSTEECLPATTPGKTGFS
ATPKNLFERPLLNSHLQKSFVSSNWAETPRMENRNESTDFPGNVLTSTTVKAQSKQAASG
RNIERHGQASYDIDNFNIDDFDDDDDDWENIMHNFSASKSSTAAYPPIKEGGPVKSLSER
ISSAKAKFLPVVSTAQNKNLSESIQNCSDKLAQNLSSKNPNHEHFQSLNFPHTKEMMKIF
HKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSL
IVDQVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIVKLLYVTPEKVCASNRLIST
LENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQK
DILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRR
ECDTVADTLQREGLSALAYHAGLSDSARDEVQHKWINQDRCQVICATIAFGMGIDKPDVR
FVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEKDGNYHTKETH
VNNLYSMVHYCENITECRRIQLLAYFGEKGFNPDFCKKYPDVSCDNCCKTKDYKTKDVTD
DVKNIIRFVQEHSSSPGTRNIGPAGRFTLNMLVDIFLGSKSAKVKSGIFGKGTAYSRHNA
ERLFKKLILDKILDEDLYINANDQPIAYVMLGTKAHSVLSGHLKVDFMETENSSSVKKQK
ALVAKVSQREEVVKKCLGELTEVCKLLGKVFGVHYFNIFNTATLKKLAESLSADPEVLLQ
IDGVTEDKLEKYGAEVIPVLQKYSEWTLPAEDGSPGARGAPEDTEEEEEGAPVSSHYFAN
QTRNERKRKKMSATQKPKRRRTSHGGFRAKGGSTTCRKTSSKSKFYGVTGSRSASCASQA
TSSASRKLGIMAPPKPVNRTFLRPSYAFS
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgttcctctgaacaatctacaagaacaactacagcgacactcagccagaaaa
cttaataatcaacccagcctttcaaaaccaaaatctttaggttttacttttaaaaagaaa
acatcagagggtgatgtgtctgtcactagtgtgtccgtagtaaaaacacctgcgttgagt
gataaagatgtgaacgtgtctgaagccttttcattcactgagtctccactccacaaacca
aagcagcaggcaaagattgaaggcttctttaaacatttccctggaaggcagcaaagcgcg
gggacatgctctgagccgtcactgccggccatgggacagcctgctcaggacacctcgtgt
actacccccaaaacccccgctgtgaagaaactgcctgtggctgttttcaagaaattagaa
ttcagttcttctgcagactccctcagtgactgggctgatatggatgactttgatatgtca
gcatcagatgcgtttgcttcactggctgaaaatcctgccacaagagtaagaaccgctcag
aaaatgaaaaagactaagagaaacttctttaagccaccacctcataaagccaatgcagta
gagactgactcgactcctccctcccccgaatgcctgcaagtggatttaacgaaggaaccg
gaagaggaggaggcggagggggccgtctgcctgagcagggacgtgatctgccttgacaat
gactctgcttctgaagagctcccggagaaaggcccgcaggaaagtcagcctttgaaagct
cacatgggcgctgaaagaggtgacagtgaaaagaagagccatgaagacaaagatgtgttc
cattcagttcagaacactctatactttgaacacaatgataatgattatgatatagatttt
gttccaccttctccagaagaaatcatctccactgcttcttcctcgttgaaatgttccagc
atgttaaatgatcttgatgactctggcaaagaaaaggacattcttagcacctcagaagag
cttctgtcaaaaccagaggaaatgaccacacacaagtctgatgcaggaaccaataaagac
tgtgatgcccagcagataagcatacagcagcagcttatccatgtgatggagcacatctgt
aagttagttgatactgttcctattgatgaattgaaagctttgaattgtgggaccgaattg
cttcaacaacgaaacataaggaggaagctcctagctgaagcgggttttaatggaaatgat
gtcagacttctgggttctctgtggaggcacaggcctgattcacttgataatacagtgcag
ggtgactcctgccctgtggggcatcctaataaagagttaaattctccataccttctctca
cattccccttccactgaggaatgtttacccgccaccactccaggaaagacaggattctca
gccaccccgaagaatctctttgaaaggccgttattgaattcccatttacagaagtccttt
gtaagtagcaactgggctgaaacaccaaggatggaaaacaggaacgaaagcactgacttc
ccagggaatgttctcaccagcaccactgtgaaagctcagagtaaacaagctgcttcagga
cgtaacatagagagacacggccaggcttcctatgatatcgataactttaacattgatgac
tttgatgatgatgatgatgactgggaaaacataatgcacaatttttcagccagcaaatct
tccacagccgcctatccacccatcaaggaaggtgggccggttaaatctctctcagagagg
atttcttcagccaaggcaaagtttcttccagtggtatcaaccgctcagaataaaaacctc
tcagagtcaattcagaattgctctgataagctggcccaaaatttatcatcaaaaaatcca
aatcatgaacattttcaaagtcttaattttcctcatacaaaagaaatgatgaagattttc
cataagaaatttggcttgcataattttagaactaatcagctagaggcgatcaatgctgcg
ctgcttggtgaagactgctttatcctaatgcccactggaggtggtaaaagtttatgctac
cagctccctgcctgtgtttctcctggggtcacaattgtcatttctcccttgagatcactg
atagtagatcaagtccaaaagctgacttcctttgatattccagctacatatctgacaggg
gataagactgactcagaagctgcaaatatttacctccagttatcaaaaaaagacccaatc
gtcaagcttttgtacgtgactcctgagaaggtctgtgcaagtaacaggctgatttctact
ctggagaatctgtatgagcggaagctcttggcacgttttgtcattgatgaagcgcattgt
gtgagtcagtggggtcatgattttcgtcaagattacaaaaggatgaatatgcttcgccag
aagtttccttctgttccagtgatggctctcacggccacggcgaaccccagggtccagaag
gacatcctcactcagctgaagatcctcagacctcaggtgtttagcatgagctttaacagg
cacaatctgaaatactatgtattaccaaagaagcccaaaaaagtagcatttgattgccta
gagtggatcagaaagcatcatccttatgactcggggataatttactgcctctccaggagg
gaatgtgacacagtggctgacactttacagagagaaggcctttctgccctggcttaccat
gcaggcctcagtgactctgccagagatgaggtgcagcacaagtggatcaaccaggacaga
tgccaggttatctgtgcgacaattgcgtttggaatgggaattgacaaacctgacgtgcga
tttgtgattcatgcatctcttcctaagtctatggagggttattatcaagaatccggccga
gctggaagagatggggaaatatctcactgcgtgcttttctatacatatcatgatgtgacc
agactgaagagacttataatgatggaaaaagatggaaactatcatacgaaggaaactcac
gtcaataatctatatagcatggtacattactgtgaaaacataacagaatgcagaagaata
cagcttttagcttactttggtgaaaaaggattcaaccctgatttttgtaagaaataccca
gatgtttcttgtgacaattgctgtaaaacaaaggattataaaacgaaagatgtgactgat
gatgtgaaaaatattataagatttgttcaagaacacagttcatcaccaggaacaagaaat
ataggacctgctggaagatttactctgaacatgctggttgacattttcttggggagcaag
agtgcaaaagtgaagtctggaatatttgggaaggggactgcatattcacggcataatgcc
gaaagactttttaaaaagctaattctagacaaaatcctggatgaagacttatatatcaat
gccaatgaccaaccaattgcctatgtgatgctaggaacaaaagcccacagtgtgctgagt
ggccacttgaaggtggacttcatggaaacggaaaattccagcagtgttaaaaaacaaaaa
gctttagtggccaaagtatcccagagagaagaggtagttaagaaatgtcttggagaactt
acagaggtctgcaaattgctggggaaagtctttggtgtccattacttcaatatttttaat
acagccacactcaaaaagcttgcagaatctttatctgctgatcctgaggttttgcttcag
attgatggtgttaccgaagacaagctggaaaaatacggtgcagaagtgattccagtatta
cagaagtactcagaatggacattgccagctgaggatggttccccaggcgccagaggcgcc
ccagaggacactgaggaggaggaggagggagcgcctgtatcgtctcactactttgcaaat
caaactagaaatgaaagaaagagaaagaaaatgtcagccacccaaaagcccaagaggaga
agaactagtcacggtggcttcagagcaaaggggggctctactacatgcagaaaaacgtct
tctaaaagtaaattctatggtgtcactggatcccgctcggcctcatgtgcttctcaagca
acatcatcagccagtagaaaactggggattatggctcctccaaagcctgtaaatagaacg
ttcctcaggccttcatatgccttctcctaa
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integrated database retrieval system
