Mus caroli (Ryukyu mouse): 110302320
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Entry
110302320 CDS
T05910
Symbol
Scn10a
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcal04040
]
110302320 (Scn10a)
Ion channels [BR:
mcal04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
110302320 (Scn10a)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
Na_trans_cytopl
CcmD_alt
IQ
Motif
Other DBs
NCBI-GeneID:
110302320
NCBI-ProteinID:
XP_021028825
Ensembl:
MGP_CAROLIEiJ_G0032804
UniProt:
A0A6P5Q8A1
LinkDB
All DBs
Position
9:complement(115034151..115143051)
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AA seq
1958 aa
AA seq
DB search
MEFPFGSVGTTNFRRFTPESLAEIEKQIAAHRAAKKGRPKHRGQKDKSEKPRPQLDLKAC
NQLPRFYGELPAELVGEPLEDLDPFYSTHRTFIVLDKSRTISRFSATWALWLFSPFNLIR
RTAIKVSVHSWFSIFITVTILVNCVCMTQTELPEKVEYAFTVVYTFEALIKILARGFCLN
EFTYLRDPWNWLDFSVITLAYVGAAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALI
HSVRKLADVTILTVFCLSVFALVGLQLFKGNLKNKCIKNGTDPHKADNLSSEMAGDIFIK
PGTTDPLLCGNGSDAGHCPDNYVCRKTSDNPDFNYTSFDSFAWAFLSLFRLMTQDSWERL
YQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQSQATIAEIEAKEKKFKEA
LEVLQKEQEVLAALGIDTTSLYSHNGSPLAPKNANERRPRVKSRMSEGSTDDNRSLQSDP
YNQRRMSFLGLSSGRRRASHGSVFHFRAPSQDVSFPDGILDDGVFHGDQGSRRSSILLGR
GAGQAGPLPRSPLPQSPNPGPRHGEEGQRGVPTGELAAGAPEGPALDAAAQKNFLSADYL
NEPFRAQRAMSVVSIMTSVIEELEESKLKCPPCLISLAQKYLIWECCPKWRKFKMVLFEL
VTDPFAELTITLCIVVNTVFMAMEHYPMTDAFDAMLQAGNIVFTVFFTMEMAFKIIAFDP
YYYFQKKWNIFDCVIVTVSLLELSASKKGSLSVLRTFRLLRVFKLAKSWPTLNMLIKIIG
NSVGALGNLTFILAIIVFIFALVGKQLLSENYGCRGDGISVWNGERLRWHMCDFFHSFLV
VFRILCGEWIENMWVCMEVSQDYICLILFLTVMVLGNLVVLNLFIALLLNSFSADNLTAP
EDDGEVNNLQVALARIQVFGHQASRAITSYIRSHCRLRWPKVETQLGVKPPLSSCKAENH
IATDAVNATVGNLAKPALGGPKENHGDFITDPNVWVSVPIAEGESDLDELEEDVEQASQS
SWQEESPKGQQELLQQVQKCEDHKAARSPPSGMSSEDLAPYLGERWQREESPRVPAEGVD
DTSSSEGSTVDCPDPEEILRKIPELAEELDEPDDCFPEGCTRRCPCCKVNTSKFPWATGW
QVRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLEEKPRVKSVLEYTDRVFTFIFVF
EMLLKWVAYGFKKYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALRPLR
ALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFSRCVDTRSNPFS
VVNSTFVTNKSECYNQNNTGHFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAVDS
RDINSQPNWEESLYMYLYFVVFIIFGGFFTLNLFVGVIIDNFNQQKKKIRGQDIFMTEEQ
KKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIIIMALICLNMITMMVETDD
QSEEKTKVLGKINQFFVAVFTGECVMKMFALRQYYFTNGWNVFDFIVVILSISSLLFSAI
LNSLETYFSPTLLRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMF
IYSIFGMASFANVIDEAGIDDMFNFKTFGNSMLCLFQITTSAGWDGLLSPILNTGPPYCD
PNRPNSNGSKGNCGSPAVGILFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLSED
DFDMFYETWEKFDPEATQFIAFSALSDFADTLSGPLRIPKPNQNILIQMDLPLVPGDKIH
CLDILFAFTKNVLGESGELDSLKTNMEEKFMATNLSKASYEPIATTLRWKQEDISATIIQ
KAYRNYMLQRSLTLSNPLHVPRAEEDGVSLPGEGYVTFMANDNRGLPDKSETASATSFPP
SYDSVTRGLSDRANISTSSSMQNEDEVTAKEGKSPGPQ
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccctttggctccgtgggaactaccaacttcagacggttcactccagagtcg
ctggcagagatcgagaagcagatcgctgcccaccgcgccgccaagaagggcagacctaag
cacagaggacagaaggacaagagtgagaagcccaggcctcagctggacttgaaggcctgt
aaccagctgcccaggttctatggcgagctcccagcagagctggtcggggaacccctggag
gacctggatcctttctacagcacacaccggacattcatcgtgttggataaaagcaggacc
atttccagattcagtgccacttgggccctgtggctcttcagtcccttcaacctgatcaga
agaacagccatcaaagtgtccgtccactcctggttctccatattcatcactgtcactatt
ttggtcaactgtgtatgcatgacccaaactgaacttccagagaaagtcgagtacgccttc
actgtcgtttacaccttcgaggctctgataaagatactggcaagagggttttgtctaaat
gagttcacttatcttcgagatccctggaactggctggacttcagtgtcattaccctggcg
tatgtgggtgcagcgatagacctccgaggaatctcaggtctgcggacattccgagttctc
cgggccctgaagactgtttctgtgatcccaggactgaaggtcatcgtgggagccctgatc
cactcagtgaggaagctggccgatgtgaccatcctcacagtcttttgcctgagtgttttt
gccttagtgggcctgcagctcttcaaggggaacctcaagaataaatgcattaagaacggc
acagatccgcacaaggctgacaatctctcatctgaaatggcaggagacatcttcatcaag
cccggtactacggaccccttgttgtgtggcaatgggtctgatgctggccactgccctgat
aattatgtctgccggaaaacttctgacaacccggattttaactacaccagctttgattcc
ttcgcgtgggctttcctctcactgttccgtctcatgacgcaggactcctgggaacggctg
taccagcagacactccgagcttccgggaaaatgtacatggtcttttttgtgctggtcatc
ttccttggatcattctacctggtcaatttgatcttggctgtggtcaccatggcatatgag
gagcagagccaggcaacaattgcagaaatcgaagccaaggaaaagaagttcaaggaagcc
ctcgaggtgctgcagaaagaacaggaggtgctggcagcgctgggcattgacacaacctcg
ctctattcccacaacggatcacccttagcccccaaaaacgccaatgagagaagacccagg
gtgaaatcaaggatgtcagaaggctcgacagatgacaacagatcactacaatccgaccct
tacaaccagcgcaggatgtctttcctaggcctttcttccggaagacgcagggctagccac
ggcagtgtgttccacttccgagcacccagccaagacgtctcatttcctgacgggatcttg
gatgacggtgtctttcacggagaccagggaagccgtcgaagttccatattgctgggcagg
ggtgctgggcaggcaggtcctctccccaggagcccactgcctcagtcccccaaccctggc
cctagacatggagaagagggacagcgtggagtgcccactggtgagcttgccgctggagcg
cctgaaggcccggcactggatgctgcagcacagaagaacttcctgtctgcggactacttg
aatgaacctttccgagcacagagggcaatgagtgttgtcagtattatgacttctgtcatt
gaggagctggaagaatctaagctgaagtgcccaccctgcttgatcagcttagcccagaag
tacctgatctgggagtgctgccccaagtggaggaagttcaagatggtgctcttcgagctg
gtgactgaccccttcgcagagctcaccatcaccctgtgcatcgtggtgaataccgtcttc
atggccatggaacactaccccatgacagatgccttcgatgccatgctccaagccggcaac
attgtctttaccgtgttttttacaatggagatggccttcaagatcattgccttcgacccc
tactactacttccagaagaagtggaacatctttgactgtgtcatcgtcaccgtgagcctg
ctggagctgagcgcatccaagaagggcagcctgtctgtgctccgcaccttccgcttgctt
cgggtcttcaagctggccaagtcctggcccaccctgaacatgctcatcaagatcattggc
aattctgtgggggccctgggcaacctgaccttcatcctggccatcatcgtcttcatcttc
gccctggtgggaaagcagctcctctcagagaactatgggtgccgcggggatggcatctcc
gtgtggaatggtgagaggctccgctggcacatgtgcgacttcttccattccttcctcgtc
gtcttccggatcctctgtggggagtggatcgagaacatgtgggtctgcatggaggtcagc
caggactacatctgcctcatcctctttttgacagtgatggtgctaggcaacctggtggtg
ctcaacctattcatcgctttactgctgaactccttcagcgcggacaacctcacagcccca
gaagatgatggagaggtgaacaacttgcaggtagcactggcccggattcaggtatttggc
catcaggccagtcgggccattaccagttacatcagaagccactgccggctccgctggccc
aaggtggagacccagctgggggtgaaacccccactcagcagctgcaaagctgagaaccac
attgctactgatgctgtcaatgctacagtggggaacctggcaaagccagctcttggtggc
cccaaggagaaccacggggacttcatcactgaccctaacgtgtgggtctctgtgcccatt
gctgagggggaatccgacctcgatgagctcgaggaagatgtggagcaggcttctcagagc
tcctggcaggaagagagccccaaagggcagcaggagctgctgcagcaagtccaaaagtgt
gaagatcacaaggcagcccgaagcccaccctccgggatgtcctctgaggacctggctcca
tacctgggggagagatggcagagggaagagagccctcgggtccctgccgagggagtggac
gatacaagctcctccgagggcagcacggtggactgcccggacccagaggagatcctgagg
aagatccctgagctggcggaggagctggacgagcccgatgactgtttcccagaaggctgc
actcgccgctgtccctgctgcaaagtgaacaccagtaagtttccttgggccacaggctgg
caggtgcgcaaaacctgctaccgcattgtggagcacagctggtttgagagtttcatcatc
ttcatgatcctgctcagcagcggagcgctggcctttgaggataactacctggaagaaaag
ccccgagtgaagtctgtgctggagtacactgacagagtgttcaccttcatctttgtattc
gagatgttgctcaagtgggtagcttacggcttcaaaaaatatttcaccaatgcctggtgc
tggctggacttcctcatcgtgaatatctccctcacaagcctcatagccaagatccttgag
tattcagacgtggcatccatcaaagcccttcggactctccgtgccctccggccgctgcgg
gctctgtctcgattcgaaggcatgagggtagtggtggatgccctggtgggcgccatcccc
tccatcatgaacgtcctcctcgtctgcctcatcttctggctcatcttcagcatcatgggt
gtgaacctcttcgccgggaaattttcgagatgtgtcgacaccagaagcaacccattttcc
gtcgtgaattcgacattcgtgactaacaagtctgagtgttacaatcaaaacaacactggc
cacttcttctgggttaacgtcaaagtcaacttcgacaacgttgctatgggctacctcgcg
cttctccaggtggcaaccttcaaaggctggatggacattatgtatgcagctgtcgattct
cgagatatcaacagtcagcccaattgggaggagagcctatacatgtacctatacttcgtc
gtcttcatcattttcggtggcttcttcacgctgaatctctttgtcggggtcatcattgac
aacttcaatcaacagaaaaaaaagataaggggccaggacatcttcatgacagaggagcag
aagaagtactacaatgccatgaagaagctgggctccaagaaaccccagaagcccatccca
cggcctttgaataagtaccagggctttgtgtttgacattgtgaccaggcaagcatttgac
atcatcatcatggctctcatctgcctcaacatgatcaccatgatggtggagactgacgat
cagagcgaggagaagacgaaggtcttgggcaaaatcaaccagttcttcgtggccgtcttc
acaggcgagtgtgtgatgaagatgttcgcccttcggcagtattatttcaccaatggctgg
aatgtgttcgacttcatcgtggtgattctgtccatttctagtctgttgttttctgcaatc
cttaactcactagaaacttacttctccccaacgctcttacgcgtcatccgtctggccagg
atcggccgtatcctcaggctgattcgagcagccaaggggattcgcacgctgctcttcgcc
ctcatgatgtccctgcccgccctcttcaacatcggcctcctcctcttcctcgtcatgttc
atctactccatcttcggcatggccagcttcgctaatgtcatagatgaggctggcatcgac
gacatgttcaacttcaagacctttggcaacagcatgctgtgccttttccagatcaccacg
tcggctggctgggacggcctcctcagccccatcctcaacacaggacccccctactgcgac
cccaaccggcccaacagcaatggctccaaggggaactgtggaagcccagcggtgggcatc
ctcttcttcaccacctacatcatcatctccttcctcatcgtggtcaacatgtacattgca
gtgattctggagaacttcaatgtggccacagaagagagcacggagcccctgagtgaggac
gactttgacatgttctatgagacctgggagaagtttgacccagaggccacccagttcatt
gccttttctgccctctcagactttgcagacacgctctctggccctcttagaatcccaaaa
cccaatcagaatatattaatccagatggacctgccgttggtccccggagataagatccac
tgtttggacatcctttttgccttcacaaagaatgtcttgggagaatctggggagttggat
tctctgaagactaatatggaagagaagtttatggcaactaacctttcaaaagcatcctat
gagccaatagcaaccaccctccggtggaagcaggaagacatctcagccaccatcattcaa
aaggcctatcggaactacatgttgcaacgctccttgacgctctccaaccccctgcatgtg
cccagggctgaggaggatggcgtgtcgctccccggggaaggctatgttacattcatggca
aatgacaaccgtgggctcccagacaaatcggaaactgcttctgctacgtctttcccacca
tcctatgacagcgtcaccaggggcctgagtgacagggctaacattagcacatctagctca
atgcaaaatgaagatgaagtcactgctaaggaagggaagagccctggacctcagtga
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integrated database retrieval system
