Mus caroli (Ryukyu mouse): 110304912
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Entry
110304912 CDS
T05910
Symbol
Dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58 isoform X2
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
110304912 (Dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mcal04054
]
110304912 (Dhx58)
Enzymes [BR:
mcal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110304912 (Dhx58)
Pattern recognition receptors [BR:
mcal04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
110304912 (Dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_19
AAA_22
Terminase_6N
CATASP
zinc_ribbon_4
Motif
Other DBs
NCBI-GeneID:
110304912
NCBI-ProteinID:
XP_021032256
Ensembl:
MGP_CAROLIEiJ_G0017181
UniProt:
A0A6P5QGA9
LinkDB
All DBs
Position
11:complement(96560695..96571762)
Genome browser
AA seq
678 aa
AA seq
DB search
MELRPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKRHLETVDRGKVVVLVNRVHLV
NQHAEEFRRMLDKHWTVTTLSGDMGSRAGFGLMARSHDLLICTAELLQLALNSSEEDEHV
ELREFSLIVVDECHHTHKDTVYNTILSRYLEQKLKKEEPLPQVLGLTASPGTGGATKLQG
AIDHILQLCANLDTCHIMSPKNCYSQLLMHNPKPCKQYDLCQRRAQDPFGDLLKKLMNQI
HQQLEMPDLKQQFGTQMYEQQVVQLCKDAAEAGLQEQRVYALHLRRYNDALFIHDTVRAR
DALDMLQDFYDRERTTKTQMVRAESWLLKLFDDHKNLLGQLAAWGPENPKLEMLERILLK
QFGSPGHTRGIIFTRTRQTASSLLLWLQQQPCLQTVGIKPQMLIGAGNTSQSTHMTQKDQ
QEVIQEFRDGILSLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMVQARGRARAGQSVYS
FLATEGSREMKRELTNEALEVLMEKAVAAVQKMDPDEFKAKIRDLQQASLLKRAARAAHR
ETQQGQFLPEQVQLLCINCMVAVGYGSDLRKVEGTHHVNVNPNFSVYYTTSQNPVVINKV
FKDWRPGGTIRCSNCGEVWGFQMIYKSVTLPVLKIRSMLLETPRGKIQAKKWSRVPFSIP
VFDILQDCTQSLSELSLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgaccctaccagtgggaagtgatcttacctgctctggagggcaagaatatc
attatatggctgcccacgggtgctgggaagacccgggcagctgcctttgtggccaagagg
catctagagacggtagacagaggcaaggtggtggtactggtcaatagggtacacctggtg
aaccagcacgctgaggagttcaggcgcatgctggataaacactggaccgtaacaaccctg
agtggggacatgggatcccgagctggctttggcctgatggctcggagccacgacctgctc
atctgcacggcagagttgttacagttggcactcaacagctctgaggaggatgaacacgta
gagctcagagaattctcgttgattgtggtggacgagtgtcaccacacccacaaggacacc
gtctacaacaccatcttgagccggtacctagaacagaagctgaagaaggaagagcccctc
ccccaggtcctgggtctcacagcctccccaggcactggaggggccaccaagctccaaggg
gccattgatcacatcctacagctttgtgcgaatttggatacgtgccacatcatgtcgcca
aagaattgctactcccagctgctgatgcataacccaaagccctgcaagcagtatgacctc
tgccaaaggcgcgcacaggatccttttggggacttgctaaaaaagcttatgaaccaaatc
caccaacaactagagatgcctgacttgaagcaacaatttgggacccagatgtatgagcag
caagtggtacagttgtgcaaggatgcggcagaggctgggctccaggaacagcgggtgtat
gcgctgcatttgcgacgctacaatgatgcgctatttatccacgatactgtccgtgcccgg
gacgctcttgacatgttgcaagatttttacgacagagaacgcaccacaaaaacacagatg
gtgcgtgctgaaagctggctgctgaagctgtttgatgaccataaaaatttgctgggccag
ctagcagcttggggtcctgagaacccgaagttggagatgctggaaaggatcttactgaag
cagtttgggagtcctggccacactcggggtatcatcttcaccagaacccgtcagactgct
tcctccctcctgctctggcttcagcagcagccttgcctacagactgtgggcatcaagccg
cagatgctgatcggagcagggaacacaagccagagcacacacatgacccagaaagaccag
caggaagtgatccaggagttcagggatggtatcctgagccttctagtagccacaagtgtg
gcagaggaggggctggatatcgctcagtgcaatgtggtggtgcgctatgggctcctgacc
aatgagatctccatggtccaggcccggggtcgtgctcgagctggtcagagtgtgtactcc
ttcctggctacagagggcagtcgggagatgaagcgggagctaaccaatgaggctctggag
gtgctgatggagaaggcggtggcggctgtacagaagatggaccctgatgagttcaaggcc
aagatccgggacttgcagcaagcatctctccttaagcgggcagcgcgagcggcccatcgg
gagacccagcaggggcagttcctaccagagcaagtgcaacttctctgcatcaactgtatg
gtggccgtgggctacgggagcgacctgcggaaagtggagggcacccaccacgtcaatgtg
aaccccaacttctcggtctattataccacctctcagaaccctgtggtcattaacaaggtc
tttaaggactggagacctggaggaaccatcaggtgcagtaactgtggggaggtctggggc
ttccagatgatctacaaatcagtgaccttgccagtgctcaaaatcagaagcatgctactg
gaaacacctcgagggaagatccaggccaaaaagtggtcccgggtgcctttctccatacct
gtcttcgatatcctgcaggactgcacccaaagcctgtccgagctctcgctggactga
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