Mus caroli (Ryukyu mouse): 110311201
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Entry
110311201 CDS
T05910
Symbol
Rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X8
KO
K14946
RNA binding protein fox-1
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcal03041
]
110311201 (Rbfox1)
Spliceosome [BR:
mcal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110311201 (Rbfox1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
110311201
NCBI-ProteinID:
XP_021040099
Ensembl:
MGP_CAROLIEiJ_G0020427
UniProt:
A0A6P5R633
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All DBs
Position
16:2030318..3671167
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AA seq
417 aa
AA seq
DB search
MLASQGVLLHSYGVPMIVPAAPYFPGLMQGNQEAAAAPDTMAQPYASAQFAPPQNGIPAE
YTAPHPHPAPEYTGQTTVPDHTLNLYPPTQTHSEQSADTSAQTVSGTATQTDDAAPTDGQ
PQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFV
TFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSP
DFYAGTVLLCQANQEGSSMYSGPSSLVYTSAMPGFPYPAATAAAAYRGAHLRGRGRTVYN
TFRAAAPPPPIPAYGGVVYQEPVYGNKLLQGGYAAYRYAQPTPATAAAYSDSYGRVYAAD
PYHHTLAPAPTYGVGAMNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYNRFAPY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgtcgcaaggagtccttctgcattcttatggcgtgcccatgattgtgcctgct
gccccctacttcccgggactgatgcagggtaatcaggaagcagcagccgcccctgacaca
atggctcagccttatgcctcagcgcagttcgcaccaccccagaatggcatccctgcagaa
tacacggcccctcatcctcatcccgcgccagagtacaccggccagaccactgtccctgac
cacacattaaacctgtatcctcctacacagacgcactcggagcagagtgctgacaccagt
gcgcagaccgtctccggcaccgccacacagacagatgatgcagcccctaccgacggccag
ccccagacacaaccttctgaaaacacagaaaacaagtcccagcccaagcggctgcatgtg
tccaacatccctttccggttccgggatccagacctccggcaaatgtttggtcaatttggt
aaaatattagatgttgaaattatttttaatgagcgaggctccaagggatttggtttcgta
actttcgaaaatagtgcggatgcggacagggcgagggagaaattgcacggtaccgtggta
gagggccgtaaaatcgaggttaataatgcgacagctcgcgtgatgacaaataagaagact
gtcaacccctacaccaatggctggaaattaaatccagttgtgggcgcggtctacagcccc
gacttctatgcaggcacggtgctgttgtgccaggccaaccaggagggatcttccatgtac
agtggccccagttcacttgtatatacttctgcaatgcctggcttcccatatccggccgcc
actgctgcagctgcataccgaggggctcaccttcgaggccgtggtcgcaccgtgtacaac
accttcagggctgcagcgcccccgcccccaatcccggcctatggcggagtagtgtatcaa
gagccagtgtatggcaataaattgctacagggtggttatgctgcgtaccgctatgcccag
cccacccctgccactgccgctgcctacagtgacagttacggacgagtttatgctgccgac
ccctaccaccacacacttgctccagcccccacctacggcgttggtgccatgaatgctttt
gcgcccttgaccgatgccaagactaggagccatgctgatgatgtgggtctcgttctttct
tcattgcaggctagtatataccgagggggatacaaccgttttgctccatattaa
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