Mus caroli (Ryukyu mouse): 110312547
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Entry
110312547 CDS
T05910
Symbol
Gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03022
Basal transcription factors
mcal03420
Nucleotide excision repair
mcal05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110312547 (Gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
110312547 (Gtf2h4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
110312547 (Gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110312547 (Gtf2h4)
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110312547 (Gtf2h4)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110312547 (Gtf2h4)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110312547 (Gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
110312547
NCBI-ProteinID:
XP_021041891
Ensembl:
MGP_CAROLIEiJ_G0021530
UniProt:
A0A6P5RA20
LinkDB
All DBs
Position
17:complement(32444498..32450448)
Genome browser
AA seq
463 aa
AA seq
DB search
MEITPSRGGLNRAHLQCRNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRM
LFLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPVFRQNLR
IALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLL
SQAGLMKSTEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQ
LSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGAGG
TVHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGI
TAQQIIHFLRTRAHPVMLKQNPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFE
LLLAHARELGVLVFENSAKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagatcaccccttcgaggggtggactgaaccgagcacacctacaatgcaggaatctc
caggaattcttaggaggcctgagccctggggtgctggaccgattgtatgggcaccctgcc
acttgtctggctgttttcagggagctcccttctttggctaagaactgggtcatgaggatg
ctcttcctggagcagcccctaccacaggctgcggtggccctgtgggtgaagaaggagttc
agcaaggctcaggaggaaagtacggggctgctgagtggcctccgtatctggcatacccag
ctgctccctggtggactccaaggcctcatcttgaaccctgtcttccgccagaacctccga
attgcccttctgggtgggggcaaggcctggtctgatgacacaagtcagctgggaccagac
aagcatgcccgggacgtcccctcactggacaagtatgctgaggagcgctgggaggtggtc
ttgcacttcatggtgggctcccccagtgcagctgtcagccaagacctggctcagctcctc
agccaggccgggcttatgaaaagcactgaacctggagaaccaccctgcatcacttccgct
ggcttccagttcctgctactggacacgcctgcccagctctggtacttcatgctgcagtat
ctgcagacagcccagagccggggcatggatctggtggagattctctccttccttttccag
ctcagcttctctactcttggcaaggactactctgtggaggggatgagtgactctttgttg
aacttcctgcaacacctgcgtgagttcgggcttgttttccagaggaagaggaagtcccgg
cgttactaccccacacgcctggccatcaacctctcatctggtgtctctggggctgggggc
actgtgcaccagccaggcttcattgtcgtggaaaccaattaccgactatatgcctatacc
gagtcggaactgcagatcgctctcattgctcttttctccgaaatgctctatcgattcccc
aacatggtggtggcacaagtgacccgggagagtgtgcagcaggccattgccagcggcatc
acagctcaacagataatccatttcctaaggacaagggcacatccagtgatgctcaaacag
aatcctgtgctgccccccaccataacagaccagattcggctgtgggagctggaaagggac
agactccggttcactgaaggcgtcctgtataaccagttcctgtcgcaagtggactttgaa
ctgctgctggcccacgcgcgggagctgggcgtgcttgtgttcgagaactctgccaagcgg
ctgatggtggtgacaccggcggggcacagcgacgtcaagcgcttctggaagcggcagaag
cacagctcctga
DBGET
integrated database retrieval system
