Mugil cephalus (flathead mullet): 125000780
Help
Entry
125000780 CDS
T08342
Symbol
lig4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
125000780 (lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcep03400
]
125000780 (lig4)
Enzymes [BR:
mcep01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
125000780 (lig4)
DNA repair and recombination proteins [BR:
mcep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
125000780 (lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
BRCT_2
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
125000780
NCBI-ProteinID:
XP_047432416
EnsemblRapid:
ENSMGCG00000008906
LinkDB
All DBs
Position
23:complement(10073277..10077505)
Genome browser
AA seq
910 aa
AA seq
DB search
MEGTSRSDAAAQPSVAAQVPFLHLCNTLEKIQKSKARPDKSKILRDFIESWRKFHSALHK
DDPKTTDSFYPAMRLIVPPFERERMAYGIKESMLAKLYIDVLGLPKNGPEANKLLNYRAP
TTSQGEAGDFAGMAYFVLKKRCTSQGNLSIKDVNDFLDSVAINNASKKKDLVKKSLLHLI
TQSSALEQKWLIRMILKDMKLGISKETVLQVFHPDAAELYNVNTDLNKVCQQLHNPSVSL
SEISIGLFSAFKPMLAAVANIRAVEKQMGNSPFYIETKLDGERIQLHKDGDVYKYFSRNA
FEYTQQFGGSPLEGSLTPHIHNFFKSHVVSCILDGEMMAYNPTAETFMQKGSKFDIKKLM
DDSELQTCFCVFDVLLINGQKLAKETLKKRYEMLQTVFTPVKGRIDVVPKADGRTMQEVV
NALNDAIDKREEGIMVKDPLSIYKPDKRGEGWLKIKPEYMDGLMDELDLLIVGGYWGKGR
RGGMMSHFLCAVAEAPKLGEKPTVFHSFCRIGSGYTMKELYDLGLKLAKHWKVYRKNNPP
ASILCGTEKPEVYIEPCNSVIIQVKAAEIVGSDMYKTNCTLRFPRIEKIRDDKEWHQCMT
LAELDQFRSKASGKLASRHLHIGSDDPQKKKRKVAPKPKKVVGVIDHFKPQDLSGVAKET
DMFEDVEFCILNGTEDHPKSELEKGVARCGGIVVQNPGRDTYCVIAGVENMRVKNLISSN
QHDVVWAAWLLECLRQKEVVPWQPRHMIHMSPSTREHFAKEYDSYGDSYFVDTDEQQLRE
VFGRIDGAAAPAAVNVAQVEERCGWDDLPTSMFRPFTVYADSFADIGDPASAITATCVDI
RALECRYHGGTVVQKLEEGVSHVIISEETRLGDLRTLRRRFRKKFKIVRESWVTDSIKAG
YVMNDTDYLV
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggaggggacttccagaagcgacgccgcggctcagccgtctgttgccgctcaagttcct
ttcctgcacttgtgcaacaccttggagaaaattcagaagtccaaagcgcgtccggataaa
tcgaaaatccttcgggatttcatcgagtcgtggcggaaatttcattcggctctccacaaa
gacgaccccaaaaccacagactcgttctatcccgccatgcgcctcatagtccctcctttt
gaacgagagcgaatggcgtacggcatcaaggagagcatgctagctaagctctacatagac
gtgttgggcctcccaaagaatggcccggaggccaacaagctgctgaactatcgtgccccg
accacgtcccaaggggaagctggggactttgccggcatggcgtacttcgtgctgaagaaa
cgctgcaccagccaggggaacctcagcatcaaagacgtcaacgactttctggactcggtg
gccatcaacaacgccagcaagaagaaggacctcgtgaaaaagagcctgctgcacctcatc
acccagagctcggctctcgagcaaaagtggctcatcaggatgatcctgaaggacatgaag
cttgggatcagcaaggagacggtcctccaagtcttccacccggatgctgccgagctctac
aacgtcaacacggacttgaataaggtttgccagcagctccacaacccctctgtgtcctta
agcgaaatctccatcggacttttctccgctttcaagcccatgctggcagccgtggctaac
atccgcgccgtggagaaacaaatgggaaacagcccgttttacatcgagaccaagctggac
ggggagcgcatccaactgcacaaggacggcgacgtgtacaagtacttcagccggaacgcc
ttcgagtacacgcagcagttcggggggtcgccgctggaggggtcgctgacgcctcacatc
cacaacttcttcaaaagccacgtcgtgagctgcatcctcgacggcgagatgatggcgtac
aacccgacggcggagaccttcatgcagaaggggagcaaattcgacatcaagaagctgatg
gacgactccgagctgcagacgtgcttctgcgtgttcgacgtgttgttgatcaacgggcag
aagctcgccaaggagacgctgaagaagcgctacgagatgctccagacggttttcacccca
gtcaaggggaggatagatgtggtgccgaaggccgacggcaggaccatgcaggaggtggtc
aacgctctcaatgacgccattgacaagagagaggaggggatcatggtgaaggatccttta
tctatctacaaacctgacaagcggggggaaggatggttaaagattaagccagaatatatg
gatggattaatggacgagcttgacttgctgattgttggaggttactgggggaagggaaga
cgcgggggtatgatgtcccatttcttatgcgccgtagccgaagctccgaagcttggtgag
aaacccacggttttccacagcttctgccgcatcggctctggctacaccatgaaagaattg
tatgatctcgggttgaagctcgccaagcactggaaggtctaccggaaaaacaacccgccg
gcgtcaatcctgtgcgggacggagaagccggaggtctacattgaaccctgcaactctgtc
atcatccaggtgaaggcggccgagatagtcggaagtgacatgtacaaaaccaactgcacc
ctgcgcttccccaggatcgagaagatccgtgacgacaaggagtggcaccagtgcatgacc
ctggcggagctggaccagttccgcagcaaggcgtccgggaagctcgcctcgcgccacctc
cacatcggcagcgacgacccgcaaaagaagaagcgcaaggtggcgcccaagcccaaaaag
gtggtcggggtcatcgaccacttcaagccccaggacctctccggggtcgccaaggagacg
gacatgttcgaggacgtggagttctgcatcctgaatggcaccgaggatcaccccaagtcc
gagctggaaaagggcgtggccaggtgcggaggaattgtggttcaaaacccggggcgggac
acctactgcgtgatcgccggcgtcgagaacatgcgcgtgaagaacctgatatcatccaac
cagcacgacgtggtctgggccgcctggctgctcgagtgcctgcgccaaaaggaagtggtc
ccgtggcaaccgcgccacatgatccacatgtcgccctccacccgggagcacttcgccaag
gagtacgacagctacggcgacagctacttcgtggacacggacgagcagcagctgcgggag
gtgttcggccggattgacggcgcggcagcgcccgccgccgtcaacgtcgcgcaagtggag
gagcgctgcggctgggatgacctccccaccagcatgttcagacccttcactgtctacgcg
gacagcttcgccgacatcggcgaccccgccagcgccattactgccacctgcgtggacatc
agggcgctggagtgtcgttaccacggaggcacggtggtgcagaagctggaggaaggagtt
tcacatgttattatctcagaggaaacgagacttggggatctgaggaccctgagacgccgc
tttaggaagaagtttaagatcgtgagagagtcatgggtgactgattcgatcaaagcaggg
tatgtgatgaacgacaccgactacctggtgtga
DBGET
integrated database retrieval system