KEGG   Mugil cephalus (flathead mullet): 125000780
Entry
125000780         CDS       T08342                                 
Symbol
lig4
Name
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
mcep  Mugil cephalus (flathead mullet)
Pathway
mcep03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mcep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    125000780 (lig4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcep03400]
    125000780 (lig4)
Enzymes [BR:mcep01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     125000780 (lig4)
DNA repair and recombination proteins [BR:mcep03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     125000780 (lig4)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_IV BRCT BRCT_2 DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 125000780
NCBI-ProteinID: XP_047432416
EnsemblRapid: ENSMGCG00000008906
LinkDB
Position
23:complement(10073277..10077505)
AA seq 910 aa
MEGTSRSDAAAQPSVAAQVPFLHLCNTLEKIQKSKARPDKSKILRDFIESWRKFHSALHK
DDPKTTDSFYPAMRLIVPPFERERMAYGIKESMLAKLYIDVLGLPKNGPEANKLLNYRAP
TTSQGEAGDFAGMAYFVLKKRCTSQGNLSIKDVNDFLDSVAINNASKKKDLVKKSLLHLI
TQSSALEQKWLIRMILKDMKLGISKETVLQVFHPDAAELYNVNTDLNKVCQQLHNPSVSL
SEISIGLFSAFKPMLAAVANIRAVEKQMGNSPFYIETKLDGERIQLHKDGDVYKYFSRNA
FEYTQQFGGSPLEGSLTPHIHNFFKSHVVSCILDGEMMAYNPTAETFMQKGSKFDIKKLM
DDSELQTCFCVFDVLLINGQKLAKETLKKRYEMLQTVFTPVKGRIDVVPKADGRTMQEVV
NALNDAIDKREEGIMVKDPLSIYKPDKRGEGWLKIKPEYMDGLMDELDLLIVGGYWGKGR
RGGMMSHFLCAVAEAPKLGEKPTVFHSFCRIGSGYTMKELYDLGLKLAKHWKVYRKNNPP
ASILCGTEKPEVYIEPCNSVIIQVKAAEIVGSDMYKTNCTLRFPRIEKIRDDKEWHQCMT
LAELDQFRSKASGKLASRHLHIGSDDPQKKKRKVAPKPKKVVGVIDHFKPQDLSGVAKET
DMFEDVEFCILNGTEDHPKSELEKGVARCGGIVVQNPGRDTYCVIAGVENMRVKNLISSN
QHDVVWAAWLLECLRQKEVVPWQPRHMIHMSPSTREHFAKEYDSYGDSYFVDTDEQQLRE
VFGRIDGAAAPAAVNVAQVEERCGWDDLPTSMFRPFTVYADSFADIGDPASAITATCVDI
RALECRYHGGTVVQKLEEGVSHVIISEETRLGDLRTLRRRFRKKFKIVRESWVTDSIKAG
YVMNDTDYLV
NT seq 2733 nt   +upstreamnt  +downstreamnt
atggaggggacttccagaagcgacgccgcggctcagccgtctgttgccgctcaagttcct
ttcctgcacttgtgcaacaccttggagaaaattcagaagtccaaagcgcgtccggataaa
tcgaaaatccttcgggatttcatcgagtcgtggcggaaatttcattcggctctccacaaa
gacgaccccaaaaccacagactcgttctatcccgccatgcgcctcatagtccctcctttt
gaacgagagcgaatggcgtacggcatcaaggagagcatgctagctaagctctacatagac
gtgttgggcctcccaaagaatggcccggaggccaacaagctgctgaactatcgtgccccg
accacgtcccaaggggaagctggggactttgccggcatggcgtacttcgtgctgaagaaa
cgctgcaccagccaggggaacctcagcatcaaagacgtcaacgactttctggactcggtg
gccatcaacaacgccagcaagaagaaggacctcgtgaaaaagagcctgctgcacctcatc
acccagagctcggctctcgagcaaaagtggctcatcaggatgatcctgaaggacatgaag
cttgggatcagcaaggagacggtcctccaagtcttccacccggatgctgccgagctctac
aacgtcaacacggacttgaataaggtttgccagcagctccacaacccctctgtgtcctta
agcgaaatctccatcggacttttctccgctttcaagcccatgctggcagccgtggctaac
atccgcgccgtggagaaacaaatgggaaacagcccgttttacatcgagaccaagctggac
ggggagcgcatccaactgcacaaggacggcgacgtgtacaagtacttcagccggaacgcc
ttcgagtacacgcagcagttcggggggtcgccgctggaggggtcgctgacgcctcacatc
cacaacttcttcaaaagccacgtcgtgagctgcatcctcgacggcgagatgatggcgtac
aacccgacggcggagaccttcatgcagaaggggagcaaattcgacatcaagaagctgatg
gacgactccgagctgcagacgtgcttctgcgtgttcgacgtgttgttgatcaacgggcag
aagctcgccaaggagacgctgaagaagcgctacgagatgctccagacggttttcacccca
gtcaaggggaggatagatgtggtgccgaaggccgacggcaggaccatgcaggaggtggtc
aacgctctcaatgacgccattgacaagagagaggaggggatcatggtgaaggatccttta
tctatctacaaacctgacaagcggggggaaggatggttaaagattaagccagaatatatg
gatggattaatggacgagcttgacttgctgattgttggaggttactgggggaagggaaga
cgcgggggtatgatgtcccatttcttatgcgccgtagccgaagctccgaagcttggtgag
aaacccacggttttccacagcttctgccgcatcggctctggctacaccatgaaagaattg
tatgatctcgggttgaagctcgccaagcactggaaggtctaccggaaaaacaacccgccg
gcgtcaatcctgtgcgggacggagaagccggaggtctacattgaaccctgcaactctgtc
atcatccaggtgaaggcggccgagatagtcggaagtgacatgtacaaaaccaactgcacc
ctgcgcttccccaggatcgagaagatccgtgacgacaaggagtggcaccagtgcatgacc
ctggcggagctggaccagttccgcagcaaggcgtccgggaagctcgcctcgcgccacctc
cacatcggcagcgacgacccgcaaaagaagaagcgcaaggtggcgcccaagcccaaaaag
gtggtcggggtcatcgaccacttcaagccccaggacctctccggggtcgccaaggagacg
gacatgttcgaggacgtggagttctgcatcctgaatggcaccgaggatcaccccaagtcc
gagctggaaaagggcgtggccaggtgcggaggaattgtggttcaaaacccggggcgggac
acctactgcgtgatcgccggcgtcgagaacatgcgcgtgaagaacctgatatcatccaac
cagcacgacgtggtctgggccgcctggctgctcgagtgcctgcgccaaaaggaagtggtc
ccgtggcaaccgcgccacatgatccacatgtcgccctccacccgggagcacttcgccaag
gagtacgacagctacggcgacagctacttcgtggacacggacgagcagcagctgcgggag
gtgttcggccggattgacggcgcggcagcgcccgccgccgtcaacgtcgcgcaagtggag
gagcgctgcggctgggatgacctccccaccagcatgttcagacccttcactgtctacgcg
gacagcttcgccgacatcggcgaccccgccagcgccattactgccacctgcgtggacatc
agggcgctggagtgtcgttaccacggaggcacggtggtgcagaagctggaggaaggagtt
tcacatgttattatctcagaggaaacgagacttggggatctgaggaccctgagacgccgc
tttaggaagaagtttaagatcgtgagagagtcatgggtgactgattcgatcaaagcaggg
tatgtgatgaacgacaccgactacctggtgtga

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