Mugil cephalus (flathead mullet): 125003978
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Entry
125003978 CDS
T08342
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125003978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
125003978
03036 Chromosome and associated proteins [BR:
mcep03036
]
125003978
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125003978
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
125003978
Chromatin remodeling factors
BAF complex
125003978
PBAF complex
125003978
GBAF(ncBAF) complex
125003978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
125003978
NCBI-ProteinID:
XP_047434211
EnsemblRapid:
ENSMGCG00000026749
LinkDB
All DBs
Position
2:1185326..1203708
Genome browser
AA seq
1680 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGTMLGPSPGPSPGSAHNMMGPSPGPPSSGHSQPGPS
GYGTDNMHTLHKPMETLHEKNLSEDSRFSQMKGLSMRQGGHSGMGPPPSPLDQHSQGYHS
PLGGSDHSSPVPSNGPPSGPLLPSSSSSSSSGGPGSTTTPLDGSSGDQHSLGPSNRPGPA
GSSGPGPSPGPSLGSGVPSLGSGLETNCPTGPGGHGGPGGPTPFNQNQLHQLRAQIMAYK
MLARGQPLPDHLQMAVQGKRPMPGMQQQPMPSLAPGAGGGPGGGPAGPGPGPMGSGYSRA
HGMMGPNMPPPGPSGTPAGMQGQNLNGPPKSWPEGPMVNAAAPSNAPQKLIPPQPTGRPS
PAPPSVPPAASPVMPPQTQSPGQPAQPTPMLPYHAKQNRITPIQKPCGLDPVEILQEREY
RLQARITHRIAELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALET
ALDAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRS
ITGKMQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAY
LLQQTDEYVANLTELVRAHKAAQALKEKKKKKKKKKKLENAEGQTPALGPDGEPLDETSQ
MSDLPVKVIHVDSGNILTGVDAPKAGQLETWLEMNPGYEVAPRSDSEDSEEEEEEEVGCN
EEEEEPQPSATQVEEKKKITDPDSEDVSEVDVRHIIENAKQDVDDEYSGAAFARGLQSYY
SVAHAVTEKVEKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIAL
ITYLMEHKRLNGPYLIIVPLSTLSNWVYEFDKWAPTVVKVSYKGSPAARRAFVPQLRSGK
FNVLLTTYEYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGT
PLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVL
RPFLLRRLKKEVEAQLPEKVEYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKDKKGKGGT
KTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPKL
RATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKTFNDPESEYFIF
LLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEE
KILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVWGQEVCLRMNEED
EVPDDETVNQMIARSEEEFDQFMRMDLDRRREEARNPRRKPRLMEEDELPTWIMKDDAEV
ERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLEEVEEEVRHKKTTRKRK
RDRDLDLPGPSSSSGGRGRGDKDDDGKRQRKRGRPPAEKLSPNPPALTKKMRKIVDAVIK
YKDSASGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHRYRSLGDLERDVML
LFQNAQTFNLEGSLIYEDSIVLQSVFTSLRQKIEKEEESDGEESDEEEEEQEEGSESECK
HVSRSVKVKIRLGRKDKSGDRGKGRSRRTGRTRAKPVVSDDDSEDEQEEERSPSATDEES
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgccggatcctcccatgggaggcacccctcgcccaggtccgtcccctggccca
ggcccttcacctggcactatgctgggccccagccctgggccctctcctggttccgctcac
aacatgatgggccccagccctggtccaccctcctccggacactcacagccaggaccctct
ggatatggcacggacaatatgcacactctgcacaaacccatggaaacacttcacgagaag
aacttgagtgaagacagtcgcttcagtcagatgaagggactatctatgagacagggcggg
cacagtgggatggggcccccacccagtcctctggaccaacactcacaaggctaccattct
cctttaggtggctctgaccattccagccctgtcccttcaaatggacccccttctggtcct
cttttgccatcatcctcttcctcctcttcctctggtggacctggctctaccaccacacct
ttagatggctccagtggagatcagcactcactgggtcccagtaaccggcctggccctgca
ggcagttctggacctggccctagcccaggtcccagtcttggctctggtgtcccaagcctt
ggttctggccttgaaactaactgcccaactggtcctggagggcatggtggcccaggtggc
ccaactccattcaaccagaaccagcttcaccaactcagagcacaaatcatggcttataaa
atgctggcccgagggcagcccctgccagaccatctccaaatggctgtccaaggaaaaagg
ccaatgccagggatgcagcagcagcccatgcccagcctggctcctggagctggaggaggt
ccaggaggtggcccagcaggaccaggccctgggccaatgggctcaggctacagtcgagct
catggaatgatgggtcccaatatgcctccaccaggcccatcaggtactccagctggcatg
cagggacaaaacctcaatggacctcccaaatcctggcctgaaggccccatggtgaatgca
gcagctccctccaatgcaccccaaaaactgattcccccccagcccactgggcggccctct
cctgctcccccttcagttcccccagctgcctccccagtaatgcccccacaaacccagtct
cccgggcagccggcgcaaccaactcctatgttgccttaccacgccaagcagaaccgcata
acccccattcagaaaccctgtggcctcgacccagtggagatattgcaggagagggagtac
aggttacaggctcgaataacccatcgcatcgcagaactggagaacctaccaggttctctg
gctggtgatttacgtaccaaagctactatagagctcaaagccctccgactccttaacttc
cagagacagctgcgtcaagaggtggtggtgtgtatgcgtcgcgacacagctctagagact
gcccttgatgccaaagcctacaagcgaagcaagcgtcagtctctgagagaagcccgcatt
acagagaagttagagaaacagcagaagattgagcaagagcgcaaacgcagacagaaacat
caggagtacctcaacagcatcctccagcatgccaaagacttcaaggagtaccatcgttcg
atcacaggcaaaatgcagaaactcaccaaggctgtggccacctatcatgccaacacagaa
cgggagcaaaagaaggagaatgagcgtattgagaaagagaggatgagaaggctaatggct
gaggatgaggagggctatcgtaaactgattgaccagaagaaggataagcgtctggcctac
ttgctgcagcaaactgatgagtatgttgccaacctcacagagctggtcagagcccacaaa
gctgcacaggccctcaaggagaagaaaaaaaagaagaagaaaaagaagaagttggagaat
gcagagggccagactcctgccttggggcctgatggagagcctctggatgagaccagtcag
atgagtgacctgcctgtgaaggtcatccatgtggacagtggaaacatcctgacaggggtg
gatgctcccaaagccggtcagctggagacctggctggagatgaaccctggttatgaggtg
gctccccgctcagacagtgaagacagtgaggaggaggaagaggaggaggtgggttgtaat
gaggaagaagaggagcctcagccttcagcaactcaagtcgaggaaaagaaaaagattaca
gaccctgacagcgaagatgtgtccgaggtggacgtcaggcacatcattgagaatgctaag
caggatgtggatgacgagtatagtggtgcagcgtttgctcgaggactccagtcatattac
tcagtggctcatgctgtcacagagaaggtggagaagcagtccagtttgttgataaatgga
cagctcaaacagtatcagattaaaggtctggagtggctggtttctctttacaacaacaac
ctgaatggcatcctggctgatgagatgggtctgggaaagaccatccagactatcgcactt
attacatacctcatggagcacaaacggctcaatggaccctacctcatcattgtacctctt
tcaactctttctaactgggtgtatgagtttgacaagtgggcaccaacagttgtgaaagtg
tcctacaaggggtctcctgccgcccgaagagcctttgtcccacagctgcgtagtggcaag
tttaacgttttactcaccacctatgaatacatcatcaaggacaaacaagtactagccaag
atccgatggaagtacatgattgtggacgaaggccaccgtatgaagaaccaccactgtaaa
ctgacccaggtcctgaacacccactaccttgctccacggcgtgtcctgttgacagggacg
ccgctgcagaacaaactacctgagctatgggcgctcctcaatttccttctgcccaccatc
ttcaagagctgcagcaccttcgagcagtggtttaatgctccttttgctatgactggagaa
aaggtggaccttaatgaagaggagacaatcctgattatccgtcgtctccacaaagtccta
cgccctttcctgttgcgaagattaaagaaggaagtggaggcacagcttccagagaaggtg
gaatatgtgatcaagtgtgacatgtcatctcttcagagggtgctgtacaggcacatgcag
gccaagggcgtcctgctcactgatggctcagagaaggacaagaagggtaaaggaggcaca
aagacactgatgaacaccatcatgcagttgaggaagatatgtaaccacccgtatatgttc
cagcaaatcgaggaatccttctctgaacatttaggattctctggtggaatagtccagggt
cctgacctgtatcgggcatcaggaaagtttgaggtgttggatcgaatcctgcctaaactc
agagccacaaaccacaaggtgttgctcttctgtcagatgacctccctcatgaccatcatg
gaggattactttgcataccgcaatttcaagtatttgcgtctggatggcactacgaaggct
gaggacagaggaatgttactgaagacattcaatgacccagagtcagagtactttatcttt
ctcctgagcacaagagctggaggccttggcctcaatctgcaatctgctgacactgtcgtt
atttttgactctgactggaacccacatcaggacctgcaggctcaagacagggctcatcga
attggtcaacagaatgaggtgcgagtgctgcgtctctgtacagtcaacagtgttgaagag
aaaatcctggcagcagctaaatacaaactaaacgtggaccagaaggtcatccaggctggc
atgtttgaccagaagtcatccagccacgagcgcagggccttcctgcaagccatcctggaa
cacgaggagcaagacgaggtctggggtcaagaagtgtgtctacgcatgaatgaggaggat
gaggtgccagatgatgagacggtcaaccagatgattgccaggagtgaagaagaatttgac
cagtttatgcgtatggacctggaccgacgtcgtgaggaggcccgtaacccacggcgaaaa
cctcgtctgatggaggaggacgagttgcctacgtggatcatgaaggatgacgctgaagtt
gagcgactcacctgtgaggaggaggaggagaaaatgtttggacgaggttctcgacagcga
aaggaagttgactacagtgattcactgacagagaagcagtggctgaaggcaatagaggag
ggcacgctggaggaagtggaggaagaggtacgtcacaaaaagacaacccgcaagaggaag
agggaccgtgacctggatctccctggtccctcatcctcctcaggagggcgcggacgtggc
gacaaagacgatgatggtaagaggcagaggaagaggggacgaccacctgctgagaaactc
tccccaaatcctcctgcccttacaaagaagatgaggaaaattgtggatgctgtcatcaag
tacaaagacagtgcaagtggccgtcagctgagcgaggtgttcatccagctgccatctagg
aaagaactgccagagtactatgaactgatacgcaagccagtggacttcagaaagatcaag
gaaaggattcgaagtcaccgctaccgcagtctgggcgacctagagagagatgtcatgttg
ctattccagaatgctcagacctttaacctggaaggatcactgatatatgaagactccatt
gtgctccagtcggtgttcaccagcttgaggcaaaagattgagaaggaggaggaaagtgat
ggagaagagagtgatgaagaggaagaagagcaggaggaaggatcagaatctgaatgtaag
catgtctctcgctcggtgaaagtgaaaatccgtctgggtaggaaagataaaagtggagat
cgagggaaggggcgcagcagacgaacaggacgcaccagagccaaacctgttgtcagtgat
gatgactctgaggatgagcaggaagaggagcgctcccccagtgccaccgatgaagagtcc
taa
DBGET
integrated database retrieval system
