Mugil cephalus (flathead mullet): 125005119
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Entry
125005119 CDS
T08342
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcep01002
]
125005119 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcep04121
]
125005119 (usp47)
Enzymes [BR:
mcep01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125005119 (usp47)
Peptidases and inhibitors [BR:
mcep01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125005119 (usp47)
Ubiquitin system [BR:
mcep04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125005119 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
125005119
NCBI-ProteinID:
XP_047436082
EnsemblRapid:
ENSMGCG00000004978
LinkDB
All DBs
Position
3:complement(6929828..6945635)
Genome browser
AA seq
1389 aa
AA seq
DB search
MEMVPSEENQFVPKEDVFWSCRQSIFDEMKRISQIHNAAEEPRVLCIIQDITSAKTVNER
LTLNLPASTTLSKLHEDVAHKAGYVNGTFDLAWGNTQDMAPLDHSSEMSLSESGFEPGKK
NFLQLTDKDGEQPQVASDESGTADSSGLDDSSQERFIGPLPRDSTAGCSGDYSSPSYSYS
SILNKSDTGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQLQ
RLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLI
NQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETLD
GPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDM
SPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTSSSTERVL
KPKSLLTFELFSVMVHSGSAAGGHYYACIKSFTDGQWYSFNDQHVSKITQDDIRKTYGGS
SGSRGYYSSAFASSTNAYMLIYRLKDPSRNAKYLAVEDFPEHIKSLVQKEKESEEQEKRQ
REIERNTCKIKLFCMHPVKMMMESKLEVHKDKTLREATEMAYKLMELEGVVSLDCCRLVK
YDEFHEYLECSYEGEEDTPMGLLLGGVKSSYMFDLLLETRKPEQVFQPYKPGEVMVKVHV
VDLKTETIASPVSVRAYLNQTITEFKQLIAQATGLSAEAMRVVLERCYNDLRLLYVPNKT
LKAEGFFRSNKVFVESSELTDHQVAFTDSLLWKLLDRHGNTIRLLVLLPEQSPGTLANRT
LCQKVGSDSDAPFDGSKGNRKSVEAILEESTEKLKNLSLQQQQQQQQQQQGSSTSDSQKS
SDASDFEHIESPTQEADSNSSLCVAADNRELENRIRATPAGSGGASDPENHFACEERSDS
EVNNDRSTSSVDSDILSSSHSSDTLCNADSGPIQLANGLDSHSITSSRRSKAHEGKKETW
DTAEEDSGTDSEYDDNGKSKAEAQYLYFRAEPCSQDDSAWDAQKCLVVHVDKRITLAAFK
QNLEPYVGVTSTQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVK
VYQLLVNEPEPCKFLVDTVFAKGMTVRQSKEELLPQLKEQCKLDLSIDRVRLRKKTWKNP
GTVFLDYHVYEEDISISSNWEVFLEVLNEPEKMKSMSQLAVLTRRWSPATMKLGPFQEVI
LESSSVEELKEKLSEISEIPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPL
YICDDGAVVFYRDSTEEPLELSEDERNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDG
GPAKDPGQD
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctagcgaggagaaccagttcgtacccaaagaggatgtgttttggagt
tgcagacagagtatttttgatgaaatgaagaggatttctcagatccataatgcagctgag
gagccccgggtgttgtgtattattcaagatatcaccagtgcaaagacggtgaacgaaagg
ctaaccctcaacctccctgcttctactaccctctccaagcttcatgaagatgtcgcccac
aaagcgggatatgtgaacggcacttttgaccttgcttggggcaacacacaggacatggca
ccactggaccatagcagtgagatgtccctctcagaatctgggtttgagcctggtaagaag
aatttcctccaacttacggacaaagatggagaacagccccaggtggcatcagatgagtca
ggaacagcagatagtagtggattggatgatagttcccaggagcgatttattgggccccta
ccaagagacagcactgcgggctgcagtggagactacagcagtccatcttactcctactcg
tccatactcaacaaatctgacacgggttatgtgggtctggtgaaccaagcaatgacctgc
tatttgaacagtcttctacaaacgctgttcatgaccccagagttcagaaatgcactctac
aactgggagtttgaggagtcagaggaggatccggtcaccagtatcccctaccagctgcaa
aggctgtttgttcttttgcaaactagtaagaaacgggccattgagaccacagatgtgacg
cgcagctttggctgggacagcagtgaggcttggcaacagcatgacgtccaggagctgtgc
agggtcatgtttgatgccctggagcagaagtggaagcaaacagaacaggctgacttgatc
aatcagttgtaccaagggaagctgaaggattatgtccgttgtctcgaatgtggctatgag
agctggaggattgatacttacctggacatccctcttgtgatccggccctttggagccagc
caggcctatggcagtgtggaggaggctttgcaggcattcatccagccagaaactctggat
gggcccaaccagtatttctgtgagcgctgcaaaaagaaatgtgacgcccggaagggcctg
agatttctgcactttccctacctgctgacattacagctgaaaaggtttgattttgactac
accactatgcatcgcatcaaactcaatgaccgcatgactttccctgaggagcttgacatg
agtccattcattgatgtggaggatgagaagtcacctcagacagagagttgcactgacagt
ggagcagagaatgaaggcagttgccacagtgaccagatgagcaacgatttttccaccgat
gactgtgtggatgagggcatctgcttggacagcacaagcagcagcacagagagggtgttg
aagccaaagagtttgctgacctttgagctgttctctgttatggtccattctgggagcgct
gcaggtggccactactacgcctgcattaaatccttcaccgatggccagtggtacagtttc
aatgatcagcacgtcagcaagatcacccaggatgatatcaggaagacatatggggggtcc
tcagggagcagaggctattactccagtgcctttgcaagctctacaaatgcatatatgctg
atttatagactgaaagacccctcaaggaatgcgaagtatttagctgtagaagacttccca
gagcacataaagagtttggttcagaaagagaaagaatctgaagagcaagaaaagcgacag
agagagattgaacgcaacacttgcaagatcaagcttttctgcatgcatcctgtgaagatg
atgatggagagcaagttggaagtgcacaaggataaaactctgagagaagcaaccgaaatg
gcctacaagctgatggagctggagggagtcgtctctctggactgctgtcgcttggtaaaa
tatgatgagttccatgaatacttggagtgctcatatgagggtgaggaggacacaccgatg
ggcctcctgctgggaggagtaaagtcctcttacatgtttgacttgctgctagagacgcgc
aagccagagcaagtgttccagccttacaaacctggagaggtgatggtgaaggttcatgtt
gttgatctgaagactgagaccattgcctctccagtcagtgttcgagcgtacttgaaccag
acgatcactgaattcaaacagcttattgcacaggctactgggctgtctgcagaagccatg
cgtgtggtgttggagcgctgctacaatgacctccgactcctctacgtcccaaacaagaca
ctgaaagctgaggggttcttcaggagtaataaggtttttgtggagagctcagagttgaca
gatcatcaggtggctttcactgactcgctcttgtggaaactgttggatcgtcacgggaac
acgatccgactgttggtcttattgcctgaacagtctcctggtaccctggccaacagaact
ctttgccaaaaagtagggagtgactctgatgcaccctttgatggctcgaagggtaacagg
aaatctgtggaggctatcctggaggagagcacagaaaagttaaagaatctgtctctgcag
cagcagcagcagcagcaacaacagcagcagggctccagcaccagtgacagccagaaaagc
tctgacgccagcgactttgaacatatcgaatccccaacccaagaggctgactcaaactct
tcactctgtgtggctgcagacaacagagagttggaaaaccggatcagggccacacctgca
ggcagcggtggtgcctctgaccctgagaaccactttgcttgtgaggagcggtcggactct
gaggtgaacaatgaccgcagcaccagctcagtggacagtgacatactgagctccagccac
agtagtgatacactgtgtaatgcagacagcggccccatccagctggccaatggcctagac
tcgcacagcatcacaagtagccgacgctctaaagcccatgagggcaaaaaggagacctgg
gacacggctgaagaggactctggaacagacagcgagtatgacgacaatggaaagagcaag
gcagaggctcagtacctttacttcagagcggagccttgttctcaagatgactctgcgtgg
gatgcacaaaaatgtttagtggttcatgtggacaagagaataacattagcagcgtttaaa
cagaacctggagccctacgtaggagtgacctcaacccagttcaaggtgttccgggtttac
gccaacaaccaggagtttgagagtgtacgactcaatgaaacactctcgtcgttctccgac
gataacaagataaccattcgattaggaagagccttgaaaaagggtgaatacagagttaaa
gtgtaccaactactagtgaatgaaccagagccctgcaagtttcttgtggacacggtattt
gccaagggtatgactgtcagacagtccaaagaggagctgctccctcagttgaaagagcag
tgtaagcttgacctcagcatcgatagggttcgtctcaggaaaaagacttggaagaatcca
ggcacagtgtttctggattaccatgtctatgaggaagacatcagcatttcctccaactgg
gaggttttcctggaagtccttaatgaaccagagaagatgaagtccatgtctcagctcgca
gttctgactcggagatggagtccggctacgatgaagctgggtccctttcaggaggtgatt
ctggagagcagcagtgtagaagaactgaaagagaagctcagtgaaataagtgagattccc
cttgaaaacctggagtttgcaaagggtagaggaacatttccttgtgatatttctgtgttg
gagatccatcaggatttggactggaatcctaaggtgtcaacccttaatgtgtggcctctt
tacatctgcgatgatggcgctgtggtcttctacagggacagcacagaggaacctctggag
ctgtcggaggatgagcgcaatgagctaatgaagaaggagagcagccgcttgctcaagacg
ggccaccgtgtcagctactcgccacgcaaggagaaggccctcaagatctatctggacggc
ggccctgccaaggacccggggcaggactga
DBGET
integrated database retrieval system
