Mugil cephalus (flathead mullet): 125008238
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Entry
125008238 CDS
T08342
Symbol
spata5
Name
(RefSeq) ATPase family protein 2 homolog
KO
K14575
AAA family ATPase
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125008238 (spata5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcep03009
]
125008238 (spata5)
Ribosome biogenesis [BR:
mcep03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
125008238 (spata5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
TIP49
AAA_22
AAA_28
AAA_2
RNA_helicase
AAA_33
Mg_chelatase
AAA_14
nSTAND3
Parvo_NS1
AAA_7
AAA_18
Rad17
IstB_IS21
AAA_3
ATPase
bpMoxR
AAA_24
CDC48_N
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
125008238
NCBI-ProteinID:
XP_047441341
EnsemblRapid:
ENSMGCG00000000645
LinkDB
All DBs
Position
5:24902223..25030238
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AA seq
892 aa
AA seq
DB search
MSSKKNKSKSKRASEGDGSLFLKEGSGDSSGLQTPGSDGRSGKSSDCNTFTVMDFIEKAD
DRTPKSCRSTLAQLGLNSMKSAGVCIGRPVLLTSPTGRQEVCLGWPVASFPGGKVGLQKC
AQNNLRVKSGDEVTLHPLTGPVLQAAEVILSNRSKDDTLDTDDFKNFLLRSLDGNVVLPG
NVLSLSYFGRSCSLLVETIKGEDGATLQRPAPLQGSGPDKEESSVMESTSADLSLQLSML
TVDDNDEEASCAPGPASSTPLRPAHLLSLSSPTAPSYNSQNPSEGETPVSPDSSLSTEQL
EKVSVAPPAGALGTDTFYCISCSTKVSFRGRAGQADPDAEAKSSKVTYSMIGGLSSQLDA
IRETIELPLKHPELFSNYGIPPPRGVLLYGPPGTGKTMIGRAIANEVGAHMVVINGPEIV
SKFYGETEARLRQIFTEASQWQPAIIFIDELDALCPKRDGAQNEVEKRVVASLLTLMDGI
GSEGHSGQLLVLGATNRPHSLDPALRRPGRFDKELEVGVPGSGERADILQKQLSFVPCSA
TAEELTQLADAAHGYVGADLAAVCKEAGLRALRRALGGSHRAASDQQLKGTVTVTLQDLQ
WAMSVVKPSAMREVAIDVPKVRWSDVGGMEEVKLKLKQAVEWPLRHPEAFTRMGIQPPKG
VLLYGPPGCSKTMIAKALANESGLNFLAVKGPELLSKYVGESERAVREVFRKARAVAPSI
VFFDEIDALAGERGSSSGSGGGVGDRVLAQLLTEMDGVEQLRDVTVLAATNRPDMIDKAL
MRPGRLDRIVYVPLPDAPTRLEIFSLQFRNMPVADNVSLDDLVARTDKYSGAEITAVCRE
AALLALQEDIKAQHIEARHFESALNAVKPRIPDSLIQSYISYQQRHSGLGFF
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgaagaaaaataaaagcaaatcgaagagggcgagtgaaggggacggttccctg
ttcctgaaggagggctccggtgactcctcgggtctgcagacgcctggctccgatgggaga
agcggcaaaagttcagactgcaacacgttcactgtcatggatttcattgaaaaggctgat
gacaggacacccaaaagctgcaggtcgactttggctcaactcggcctcaattcgatgaag
tcagccggcgtttgcatcgggagaccggtgctgctgacgagtcccacgggacgacaagag
gtttgcttgggttggcccgtcgcctcgtttccgggaggaaaagtcggcctccagaagtgt
gcgcagaacaacttgagagtgaagtcgggggacgaggtgacgctacacccgctgacaggt
cctgtgcttcaggctgcagaggtgatcctctctaacaggtcaaaagacgacacattagac
acggacgactttaagaacttccttctgaggtctttggacgggaacgtcgtcctaccagga
aacgtcctctcactgagctacttcggccgctcgtgcagcctcctggtcgagaccataaaa
ggagaggatggcgccaccctccagagaccggctcctctccaggggtcgggccccgacaaa
gaagagtcctctgtgatggaatccacgtcggccgacctctcgctgcagctcagcatgctg
accgtggatgacaacgatgaggaggcctcatgcgcgcccggtccggcctccagcaccccg
ctccgaccggcccacctcctttcactctcctcgcccacagctccttcctacaactcccag
aatccctcagaaggggagactcctgtcagtccagacagttcactcagcacagagcagcta
gagaaggtgtctgtagctccacctgctggtgctttgggtactgacaccttctactgcatc
tcatgctccaccaaggtcagttttagaggcagagcagggcaggcagatccggatgcagaa
gctaaaagttcgaaggtcacgtacagcatgatcggaggcctcagcagccagttggatgcc
atcagagagacgattgaacttcctctgaaacaccccgagctgttttccaactatgggatc
ccacctccgagaggggttcttctgtacggcccgccagggacagggaagaccatgattgga
cgagccatagccaacgaggtcggagctcacatggtggtgataaacggcccggagatcgtg
agcaagttttacggtgagactgaggcgaggctgaggcagatattcaccgaggcgtctcag
tggcagcctgcgatcatcttcatcgatgagctcgatgctttgtgcccgaagcgggatgga
gctcagaacgaggtggagaaacgagtggtcgcttctctcctgactctgatggacgggatc
ggttcggagggtcactccggtcagctgttggttttgggggccacgaaccggccccattct
ctcgaccccgccctgcgcaggcccggacgcttcgataaggagctagaggtgggagttcct
ggtagcggcgagcgtgcagatattttgcagaagcagctgagttttgtaccgtgcagcgcc
accgccgaggagctgacgcagctggcggacgccgctcatggatacgtgggggcggacctc
gcagctgtttgcaaagaagcaggtttgcgcgccctgagacgagccctgggcggttcccat
cgagcggcgtcggaccagcagctgaaggggacggtgacggtcactctgcaggacctgcag
tgggccatgtcagtcgtgaagcccagcgccatgagggaggtcgctattgacgtcccgaag
gtccgctggtcagacgtcggcgggatggaagaggtgaagctgaaactgaagcaggctgtg
gagtggcccctgaggcacccggaagccttcacccgcatggggatccagcctccgaaagga
gtcctgctctacgggcccccgggctgctccaagaccatgatagccaaggctctggctaat
gagagcgggctcaacttcctagctgttaaaggccctgagttactgagcaagtacgttgga
gaatctgagagagcagtcagagaggtgtttcggaaggcgagggccgtcgctccctccatc
gtcttctttgatgagatcgacgctctcgccggcgaaagaggaagctcgtcaggttccggc
ggcggcgtaggggaccgggtcctggctcagctcctgacagagatggacggcgtcgagcag
ctccgagacgtcacagtgctggccgccaccaaccggcccgacatgatcgataaggctctg
atgcgtccaggtcgccttgaccgaatcgtctatgtgcctcttccagatgctccgacccga
ctggaaatattctccctccagttccgtaacatgcccgtggctgataatgtgtctcttgat
gacctggtggctcggaccgacaagtattctggagccgagataacggcagtatgcagagag
gccgccctcctggccctgcaagaggacatcaaagctcagcacatcgaggccagacacttt
gaaagtgccctgaacgcggtgaagccccggatccccgactctctcatccagtcgtatatc
agctatcagcagcggcacagcggcctgggcttcttctga
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