KEGG   Mugil cephalus (flathead mullet): 125008238
Entry
125008238         CDS       T08342                                 
Symbol
spata5
Name
(RefSeq) ATPase family protein 2 homolog
  KO
K14575  AAA family ATPase
Organism
mcep  Mugil cephalus (flathead mullet)
Pathway
mcep03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mcep00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    125008238 (spata5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mcep03009]
    125008238 (spata5)
Ribosome biogenesis [BR:mcep03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    125008238 (spata5)
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_16 AAA_5 TIP49 AAA_22 AAA_28 AAA_2 RNA_helicase AAA_33 Mg_chelatase AAA_14 nSTAND3 Parvo_NS1 AAA_7 AAA_18 Rad17 IstB_IS21 AAA_3 ATPase bpMoxR AAA_24 CDC48_N SLFN-g3_helicase
Other DBs
NCBI-GeneID: 125008238
NCBI-ProteinID: XP_047441341
EnsemblRapid: ENSMGCG00000000645
LinkDB
Position
5:24902223..25030238
AA seq 892 aa
MSSKKNKSKSKRASEGDGSLFLKEGSGDSSGLQTPGSDGRSGKSSDCNTFTVMDFIEKAD
DRTPKSCRSTLAQLGLNSMKSAGVCIGRPVLLTSPTGRQEVCLGWPVASFPGGKVGLQKC
AQNNLRVKSGDEVTLHPLTGPVLQAAEVILSNRSKDDTLDTDDFKNFLLRSLDGNVVLPG
NVLSLSYFGRSCSLLVETIKGEDGATLQRPAPLQGSGPDKEESSVMESTSADLSLQLSML
TVDDNDEEASCAPGPASSTPLRPAHLLSLSSPTAPSYNSQNPSEGETPVSPDSSLSTEQL
EKVSVAPPAGALGTDTFYCISCSTKVSFRGRAGQADPDAEAKSSKVTYSMIGGLSSQLDA
IRETIELPLKHPELFSNYGIPPPRGVLLYGPPGTGKTMIGRAIANEVGAHMVVINGPEIV
SKFYGETEARLRQIFTEASQWQPAIIFIDELDALCPKRDGAQNEVEKRVVASLLTLMDGI
GSEGHSGQLLVLGATNRPHSLDPALRRPGRFDKELEVGVPGSGERADILQKQLSFVPCSA
TAEELTQLADAAHGYVGADLAAVCKEAGLRALRRALGGSHRAASDQQLKGTVTVTLQDLQ
WAMSVVKPSAMREVAIDVPKVRWSDVGGMEEVKLKLKQAVEWPLRHPEAFTRMGIQPPKG
VLLYGPPGCSKTMIAKALANESGLNFLAVKGPELLSKYVGESERAVREVFRKARAVAPSI
VFFDEIDALAGERGSSSGSGGGVGDRVLAQLLTEMDGVEQLRDVTVLAATNRPDMIDKAL
MRPGRLDRIVYVPLPDAPTRLEIFSLQFRNMPVADNVSLDDLVARTDKYSGAEITAVCRE
AALLALQEDIKAQHIEARHFESALNAVKPRIPDSLIQSYISYQQRHSGLGFF
NT seq 2679 nt   +upstreamnt  +downstreamnt
atgtcttcgaagaaaaataaaagcaaatcgaagagggcgagtgaaggggacggttccctg
ttcctgaaggagggctccggtgactcctcgggtctgcagacgcctggctccgatgggaga
agcggcaaaagttcagactgcaacacgttcactgtcatggatttcattgaaaaggctgat
gacaggacacccaaaagctgcaggtcgactttggctcaactcggcctcaattcgatgaag
tcagccggcgtttgcatcgggagaccggtgctgctgacgagtcccacgggacgacaagag
gtttgcttgggttggcccgtcgcctcgtttccgggaggaaaagtcggcctccagaagtgt
gcgcagaacaacttgagagtgaagtcgggggacgaggtgacgctacacccgctgacaggt
cctgtgcttcaggctgcagaggtgatcctctctaacaggtcaaaagacgacacattagac
acggacgactttaagaacttccttctgaggtctttggacgggaacgtcgtcctaccagga
aacgtcctctcactgagctacttcggccgctcgtgcagcctcctggtcgagaccataaaa
ggagaggatggcgccaccctccagagaccggctcctctccaggggtcgggccccgacaaa
gaagagtcctctgtgatggaatccacgtcggccgacctctcgctgcagctcagcatgctg
accgtggatgacaacgatgaggaggcctcatgcgcgcccggtccggcctccagcaccccg
ctccgaccggcccacctcctttcactctcctcgcccacagctccttcctacaactcccag
aatccctcagaaggggagactcctgtcagtccagacagttcactcagcacagagcagcta
gagaaggtgtctgtagctccacctgctggtgctttgggtactgacaccttctactgcatc
tcatgctccaccaaggtcagttttagaggcagagcagggcaggcagatccggatgcagaa
gctaaaagttcgaaggtcacgtacagcatgatcggaggcctcagcagccagttggatgcc
atcagagagacgattgaacttcctctgaaacaccccgagctgttttccaactatgggatc
ccacctccgagaggggttcttctgtacggcccgccagggacagggaagaccatgattgga
cgagccatagccaacgaggtcggagctcacatggtggtgataaacggcccggagatcgtg
agcaagttttacggtgagactgaggcgaggctgaggcagatattcaccgaggcgtctcag
tggcagcctgcgatcatcttcatcgatgagctcgatgctttgtgcccgaagcgggatgga
gctcagaacgaggtggagaaacgagtggtcgcttctctcctgactctgatggacgggatc
ggttcggagggtcactccggtcagctgttggttttgggggccacgaaccggccccattct
ctcgaccccgccctgcgcaggcccggacgcttcgataaggagctagaggtgggagttcct
ggtagcggcgagcgtgcagatattttgcagaagcagctgagttttgtaccgtgcagcgcc
accgccgaggagctgacgcagctggcggacgccgctcatggatacgtgggggcggacctc
gcagctgtttgcaaagaagcaggtttgcgcgccctgagacgagccctgggcggttcccat
cgagcggcgtcggaccagcagctgaaggggacggtgacggtcactctgcaggacctgcag
tgggccatgtcagtcgtgaagcccagcgccatgagggaggtcgctattgacgtcccgaag
gtccgctggtcagacgtcggcgggatggaagaggtgaagctgaaactgaagcaggctgtg
gagtggcccctgaggcacccggaagccttcacccgcatggggatccagcctccgaaagga
gtcctgctctacgggcccccgggctgctccaagaccatgatagccaaggctctggctaat
gagagcgggctcaacttcctagctgttaaaggccctgagttactgagcaagtacgttgga
gaatctgagagagcagtcagagaggtgtttcggaaggcgagggccgtcgctccctccatc
gtcttctttgatgagatcgacgctctcgccggcgaaagaggaagctcgtcaggttccggc
ggcggcgtaggggaccgggtcctggctcagctcctgacagagatggacggcgtcgagcag
ctccgagacgtcacagtgctggccgccaccaaccggcccgacatgatcgataaggctctg
atgcgtccaggtcgccttgaccgaatcgtctatgtgcctcttccagatgctccgacccga
ctggaaatattctccctccagttccgtaacatgcccgtggctgataatgtgtctcttgat
gacctggtggctcggaccgacaagtattctggagccgagataacggcagtatgcagagag
gccgccctcctggccctgcaagaggacatcaaagctcagcacatcgaggccagacacttt
gaaagtgccctgaacgcggtgaagccccggatccccgactctctcatccagtcgtatatc
agctatcagcagcggcacagcggcctgggcttcttctga

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