Mugil cephalus (flathead mullet): 125012086
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Entry
125012086 CDS
T08342
Symbol
tpcn1
Name
(RefSeq) two pore channel protein 1 isoform X1
KO
K16896
two pore calcium channel protein 1
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125012086 (tpcn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcep04040
]
125012086 (tpcn1)
Ion channels [BR:
mcep04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
125012086 (tpcn1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Pilin_N
YMF19
Motif
Other DBs
NCBI-GeneID:
125012086
NCBI-ProteinID:
XP_047447683
EnsemblRapid:
ENSMGCG00000020452
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Position
8:complement(14273775..14284651)
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AA seq
831 aa
AA seq
DB search
MECIHGQTAGLHEDRYRNEYPEVVSSYASQLELDCIDGGGNYDIVNNAVVSTPGPQNYRA
QNVSLRQSWEMNYQEAAIYLQEGENNDKFFTHPRNPKALAAYLFAHNHLFYMMELLTGLL
LMMLSLCEAPAVPSLRLDVYVHATLELLALVMVAFELCMKLRWLGFHTFIRHKRTMVKTC
VLLLQFVEAIVVLIRQTSHVRVTRALRPIFLVDCRYCGAVRRNLRQIFQSLPPFIDILLL
LLFFMVIFAILGFCLFSPNTADPYFNTLENSLVSLFVLLTTANFPDVMMPAYSKNRWSCV
FFIVYLSIELYFIMNLLLAVVFDTFNDVEKMKFKSLLLHKRSAIDHAFQLLVSRQRPMGV
SLKQFDGLMRFYRPRMSARDRFLTYKALNTSGAPMLSLEDFYKFYEVTGLKWKARRSGEH
WFDDLPHTAFLIFKGINILVKSKAFQYVMYVVVAINGVWILVETYTLNSGFSWSRFVPWS
YIVFLTIYGVEVLLKISGLGPTAYFSSGWNLFDFSVTVFAFLGLIALAFDMEPFYFIVVL
RPLQLLRLFKIKQRYRNVLDTMFELFPRMASLGLTLIIFYYSFAIVGMEFFADVIYPNCC
NSSTVADSYRLINNTVGNKTTLEEGYYYLNNFNNILSSFVTLFELTVVNNWYITMEGVTS
MTTHWSRLYFMTFYIVTMVVMTIIVAFILDAFVFRMNYSRKNREPVDNPEDENGIVFEVE
VGRDEALATLELYKQTCPGLSYLSSLQGVLQAMDRSGHSSLVYLGRRSRTKSDLSMKMYE
EEIQEWYAEYSREILPQPDQSPERDQNSPVSDPSPLPELQLNSQTGPHSIN
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcatacatggacagacagctggtttacatgaagatcgctaccgtaacgagtat
ccagaagtggtctcctcctatgcctcacagttagaactagactgcattgatggaggaggc
aattatgacatagtgaacaatgctgtggtctcaacacctgggccgcaaaactacagagcc
caaaatgtgtcgttacgacaaagctgggagatgaactaccaagaggcagccatctatctg
caggaaggagagaacaacgataagttcttcactcacccccgaaacccaaaggcgctggcg
gcctacctgtttgcccacaaccacctgttctacatgatggagctgctgacaggcctgctg
ctcatgatgctgtcgctgtgtgaagctcccgccgtaccctcactgcggctggatgtctac
gtccatgccacgctggagctgctggctctggtcatggtggcattcgagctatgcatgaaa
ctccgctggttaggcttccacaccttcatacgccacaagaggaccatggtcaagacatgt
gttttgctgctgcagtttgtggaggccatagtggttctgatcagacaaacatctcacgtg
cgagtgacccgagcgctcagacccatattcctggtggactgtagatactgtggagctgtg
cgcagaaacctaagacagatcttccagtctcttccacctttcattgacatcctcctgctg
ctgcttttcttcatggttatatttgccatcttggggttctgcctcttctctccaaacact
gctgacccgtacttcaacactctggagaacagcctcgtcagcctctttgtcctgctgacc
acagcaaacttccctgatgtgatgatgccggcgtactccaagaaccgctggtcctgtgtt
ttcttcattgtttacctctccatagagctctacttcatcatgaacctgctcctggcagtg
gtgttcgatacattcaatgacgtcgagaagatgaagtttaaatctcttttgcttcacaaa
cgctctgctattgaccatgcctttcagctgttagttagtcggcagaggccgatgggtgtg
tccctgaaacagttcgatggtctgatgcgtttttacagaccacggatgtctgcgagagac
cgcttcctcacatataaagctcttaacacatcaggggctcctatgctcagtctggaggac
ttttacaagttctacgaggtcaccggacttaaatggaaggcgcgacgcagcggagagcat
tggttcgacgacctcccccacacagccttcctcattttcaaaggcatcaacatacttgtg
aagtcaaaggccttccagtatgttatgtacgtggtggtggccatcaatggtgtgtggatc
ctggtggagacgtacacgctcaatagtgggttttcctggtccagatttgttccctggagc
tacatcgttttcctgaccatttatggtgttgaggtgttattgaaaatatcaggtttgggg
ccaacagcttatttcagctctgggtggaatctgtttgatttctctgtgacggtgtttgcc
ttcctgggcctgatcgctctcgcctttgatatggagccgttttactttatcgtagttctc
agaccacttcagctgctccggctgtttaagattaagcagagatatcgcaacgtattggac
accatgtttgagctctttcccaggatggcaagtctggggttgacattaattatcttctac
tattcctttgccattgtgggaatggagttttttgcagatgtgatttatcccaactgctgc
aactccagcacagtggccgactcctacagactgatcaacaacacagtcggcaacaaaacc
acgttggaggaaggctactactatctcaataacttcaacaacatcctcagcagcttcgtg
actctgtttgaactgactgtggtcaacaactggtacatcaccatggaaggagtcacttcg
atgacgactcactggagccgcctgtacttcatgaccttctacatagttactatggtggtg
atgaccatcattgtggcattcattctggacgcgttcgtgtttcgcatgaactacagccgc
aagaatcgggagccggtggataacccagaggatgaaaatggaatagtatttgaagtagag
gtgggtcgtgatgaagctctggccactcttgagctttacaaacagacgtgtcctggactg
tcttacctcagctctctacagggcgtcctacaagctatggacaggagtgggcactcgtct
cttgtgtacctaggtcgcaggtctaggacaaagagtgacctcagcatgaaaatgtacgag
gaggagatacaggagtggtatgcagaatattcaagggaaatcctgcctcagccagaccaa
agcccggagcgagaccagaacagtcccgtctccgacccgtctcccttaccagagctgcag
ctcaactcacagactggaccgcacagcattaactga
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