Mugil cephalus (flathead mullet): 125020961
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Entry
125020961 CDS
T08342
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125020961 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcep03041
]
125020961 (ddx46)
Enzymes [BR:
mcep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125020961 (ddx46)
Spliceosome [BR:
mcep03041
]
Complex A
U2 snRNP components
U2 related factors
125020961 (ddx46)
Complex B
125020961 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
125020961
NCBI-ProteinID:
XP_047462610
EnsemblRapid:
ENSMGCG00000000963
LinkDB
All DBs
Position
15:complement(20092401..20105223)
Genome browser
AA seq
1059 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSKSRSPDKRSKKDDRDRSRRERSRSRDRRRSRSRDRKRA
RRTRSRERRRSRSRDRRRSGSRTRARRSRSASPSKSRKTDEKPKSKEKDVLDALSEKKKV
KEEKEDEKVEDQDFDQNKLEEEMRKRKERVEKWREEQRKKAIENIGEIKKELEEMKQGKK
WSLEDDDDDDDEGSALMEGDDDEDGDAKGEKKDKDMKEEKKEEEEKEAAMDLQAEEDDVD
PLDAYMEEVKQEVKKFNMGAMKGNDKKGAMTVTKVVTVVKTKKGIHTHKKKGELMENDQD
AMEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHGKIQYEPYRKNFYVEVPELARMTVEEV
NAYRLELEGIIVKGKGCPKPIKTWVQCGVSMKILNAMKKHSYEKPTPIQAQAIPAIMSGR
DLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEESEGPISVIMTPTRELALQITKECKKFSK
SLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYVVLDE
ADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILAKPIEVQVGGRSVVC
SDVEQHVLVIDEDKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLH
GGIDQYDRDSIINDFKNGACRLMVATSVAARGLDVKQLILVVNYNCPNHYEDYVHRAGRT
GRAGNKGYAYTFITEDQVRYAGDIIKALELSGSPVPPELEQLWASFKDQQKAEGKTIKSS
SGFSGKGFKFDETEHALANERKKLQKAALGLQDSDDEDGALDIEEQIESMFNSKKRVKDL
SAPGAAAGQAGTVASTAAAPGGLPGIGPTSAGNIQKLEMAKRLALKINAQKNLGAEAQDV
MQQATNAILRGGTIMTPSVSAKTIAEQLAEKINAKLNYTPVEKLEEERQAAEQAETVKRY
EEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLAIES
ANELAVQKAKTEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtgagtcgagacattacaggaaacggtccgcgtctcgggggcggtcaggcagc
cgatcaaagagtcggtccccggacaaacgatccaagaaagacgaccgagaccgaagcagg
agagagagatcacggagccgggaccgccgcaggtcccggtccagagacaggaagcgagcc
aggcgcaccaggagcagagagaggaggagatccagaagtcgagacaggaggagatctggc
agcagaacccgagcacggaggtcccgatcggccagtcccagcaagagcaggaaaacagat
gaaaagccaaagagcaaagagaaagacgttctcgatgctttatccgagaagaaaaaggtt
aaagaggagaaagaagatgaaaaggttgaggaccaagattttgaccagaacaagctggag
gaagagatgaggaagaggaaggagcgagtggagaagtggagggaggagcagaggaagaaa
gccatcgaaaacatcggcgagatcaagaaggaactggaggagatgaagcagggcaagaaa
tggagtctggaggatgatgacgacgatgacgacgagggttcagccctgatggagggagac
gatgacgaagatggggatgcaaagggggaaaagaaagataaagatatgaaggaagagaag
aaagaggaggaggagaaggaggctgccatggatctgcaggccgaggaagacgacgtggat
cctctggacgcttacatggaggaggtcaaacaggaggtgaagaaattcaacatgggagcc
atgaaaggaaatgataagaaaggagcgatgacagtaaccaaagtggtgacagtagtcaaa
accaaaaaaggaattcacactcacaagaagaagggtgagctgatggagaatgaccaggac
gccatggagtattcgtcagaggaggaggaggtggatctgcagacggctctgacgggcttc
cagaccaaacagaggaaggtcctggagcctgtcgaccacgggaaaatccagtacgaaccg
taccgcaaaaacttctatgtggaggtgcctgagttggccaggatgacggtagaagaagtg
aatgcgtacaggctggagctggaaggcatcatagtcaaggggaagggctgtcccaaaccc
atcaagacctgggtgcagtgcggggtatcgatgaagatcctcaacgctatgaagaagcat
agctacgagaagcccacgcccatccaggcccaggccatccccgccatcatgtcgggtcgg
gacctaatcggcatcgctaagaccggcagcggcaaaaccatcgctttccttctgcccatg
ttccgacacatcatggaccagaggcccctggaggagtctgagggacccatatcggtaatc
atgactccaaccagagagctggctctgcagatcacaaaggagtgcaagaagttctctaaa
tcgctgggactcagggtggtgtgtgtttacggaggaacgggtatcagcgagcagatcgct
gagctgaagagaggagctgagatcatcgtgtgcacgccgggaagaatgattgacatgttg
ggggccaacagcggtcgggtaacgaacctgcgcagagtaacgtacgtggtgttggatgaa
gcagacagaatgtttgacatgggcttcgagccacaggtgatgcgcatcgttgacaacgtg
cgtcccgaccgccagacggtcatgttctccgccacgtttcccagagccatggaggctctg
gctcgtaggatcctggcgaaacccatcgaggtccaggtgggaggtcgcagtgtcgtctgc
tcggacgtggagcagcatgtgctcgtcatcgatgaggacaagaagttcctgaagctgctg
gagattttgggtcactaccaggagaagggatctgttatcattttcgtggacaagcaggag
catgcggacgggctgctcaaagacctgatgaaagcctcgtacccctgcatgtctttacac
ggagggatcgatcagtacgacagagacagcatcatcaacgattttaagaacggagcgtgt
cgcctgatggtggccacgtctgtggcagccagaggcctggacgtcaagcagctgatcctg
gtggtcaactacaactgtcccaaccactacgaggactacgtccacagggcgggacgcacg
ggcagagcaggcaacaagggttacgcctacaccttcatcacagaggatcaggttcgatac
gccggcgacatcatcaaggctctggagctgtccggctcgcctgtcccaccagaactggag
cagctttgggcttcgttcaaagaccaacagaaagcggaaggtaaaaccattaaaagcagc
agtggcttctcaggaaaaggcttcaagtttgacgagaccgagcacgccctggccaacgag
aggaagaagctgcagaaagctgctctgggactgcaggactctgatgatgaggatggagcc
ctggacattgaggagcaaatcgaaagcatgttcaactccaagaagagggtgaaggatctc
tctgctcccggggcggcagcgggtcaagctggaactgttgcctctactgcagctgcccca
ggaggactgccgggcatcgggcctacgtctgctggaaacatccagaagctggagatggcc
aaaaggctggcgctcaagatcaacgcccagaagaacctgggtgctgaggcacaggacgtg
atgcagcaggccaccaacgccatcctgcgcggcggcaccatcatgacgccgtccgtgtcg
gccaagaccatcgccgagcagctggcggagaagatcaatgccaaactgaactacaccccc
gtggagaagctggaggaggagcggcaggcggcggaacaggccgagaccgttaagagatac
gaagaggagctggagatcaatgactttcctcagacggccaggtggaaggtgacgtctaaa
gaagctttgcagaggatcggtgaatactctgaagccgccatcaccatccgaggaacctac
ttccctcctggcaaagagccaaaggaaggagagcgcaagatctatctggctattgagagt
gcaaatgaactggctgtgcagaaagccaaaacggagattacacggctaatcaaggaagag
ctcattagattacaaaactcataccagccgacgagcaaaggccggtacaaggtgttgtag
DBGET
integrated database retrieval system
