Momordica charantia (bitter melon): 111005215
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Entry
111005215 CDS
T05045
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111005215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcha03041
]
111005215
Enzymes [BR:
mcha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111005215
Spliceosome [BR:
mcha03041
]
Complex A
U2 snRNP components
U2 related factors
111005215
Complex B
111005215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
KdpC
Motif
Other DBs
NCBI-GeneID:
111005215
NCBI-ProteinID:
XP_022132344
UniProt:
A0A6J1BTP1
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MEEGKTKSRREDLDDPKKSHRDRDRERDKERNGDRSRDKEKRDRERRSEREKSADSDEQQ
YEREREKLRRGKDKTRSRDDEKEKAKDRRKDREKERNRDREDRARERTRDKEKEREEKRE
RAREKEREKRERIKEDRERERDRDRERRERERDREKEREKDRRKRRDVVSDYSDEDSTDH
TRKRRRREDDDSRAHESNIRTNKQRDHGEESPREKSEEGASDKNETKPTREEELENEQRK
LDEEMEKRRRRVQEWQKSRRLKEEAESDKQGEPNADEPKSGKTWTLEGESDDEYENAKPT
ETDMDVDESSKPPEEGGQVAVDSDNSNEAAAPPLQDGINGDEEIDPLDAFMNSMVLPEVE
KLNKVETPAVSDDKISELKSRDKPSDQSGSKHQRRISKKSMGRIIPGEDSDTDYGDLEND
EDNLEDEDDDEFMKRVKKTKAEKLSIVDHTKMDYKPFRKNFYIEVKEISRMTTEEVAAYR
KQLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLNYEKPMPIQAQALPIVMSGRDCIGI
AKTGSGKTLAFVLPMLRHIKDQPPVVPGDGPIGLIMAPTRELVQQIHSDIKKFSKVLGLR
CVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTFLVMDEADRMF
DMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQ
LVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQ
TDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGR
KGCAITFIAEEDSRYAPDLVKALELSEQVVPDDLRALADSFMAKVNQGLEQAHGTGYGGS
GFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAALAQIAAIAA
ATKVSAASITTPISAAQLLPNGGLPVSVPGVLGLTIPGTVAVIPGATLPVVANDGAAARA
ALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITT
RGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGGSQPGRY
SVV
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggcaaaaccaaatccagaagagaagatttggatgacccgaagaagagtcac
cgggaccgcgatagggaaagggacaaggagagaaacggcgatagaagcagagacaaggag
aagagggaccgggagcgacgttctgagagggaaaagagtgccgattctgatgagcagcag
tacgagagggagagggaaaaacttagaagaggcaaggataaaactcggagtcgggatgat
gaaaaagaaaaggcaaaggataggaggaaggatagggagaaggaaaggaacagggacaga
gaagatagggcaagggagagaacgagggataaggagaaagagagagaggagaagagggag
agggcaagagagaaagaaagagagaagagagaacgcatcaaagaagatcgtgagagggag
agagacagggatagagagaggagagaacgtgagagagatagggaaaaggaaagagagaaa
gacagaaggaagcgacgggatgttgttagtgactatagtgatgaagactctactgatcac
actaggaaacggcgcaggagagaagatgacgactctagagctcatgaaagcaatatcagg
acaaataagcagagagatcatggtgaagagagtccacgagaaaagagtgaagaaggtgca
tctgataagaatgaaacaaagccaactcgtgaagaggagctggaaaatgaacaaaggaag
ttggatgaagaaatggaaaaacgtaggcgaagagttcaagagtggcagaagtcacggaga
ttgaaggaagaggctgaaagcgataagcagggtgagccaaatgctgatgaaccaaaatca
ggcaagacatggacccttgaaggtgaatctgatgatgagtatgaaaatgccaaacctact
gagactgatatggatgttgatgaaagttctaagccgcctgaagaaggtggacaagttgca
gttgactccgacaatagcaatgaagcagctgcacctccactgcaagatggcattaatggt
gatgaggaaattgatcctctggatgctttcatgaattccatggtgttacctgaagtggag
aagctaaataaagttgagacccctgcagttagtgatgataaaatttcagagttgaagagc
agagataaaccgagtgatcaaagtggcagtaaacaccaaagaagaatttcaaagaaatca
atgggtagaataattcctggtgaagattctgacacagactatggagatcttgagaatgat
gaagacaatttagaagatgaagatgatgacgagttcatgaaaagggtgaagaagacaaag
gctgagaagctttctattgttgaccatacaaagatggattataaacctttccggaaaaac
ttctatattgaagtgaaggagatatctaggatgacaaccgaagaagttgctgcttaccgt
aagcaattggaactaaagatacatggaaaagatgttccaaagcctgtcaaaacctggcat
caaactggacttactagtaaaattttagaaacaattaaaaaactcaactatgagaagcca
atgccaatacaagctcaggcattgccaattgtcatgagtggtcgagattgcataggtatt
gccaaaactggatctggaaaaacacttgcatttgtgcttccaatgctgagacatatcaag
gatcaaccccctgttgtacctggtgatggtcctattgggcttataatggctcctaccaga
gagttggtccagcagatccacagtgatataaagaagttctccaaggttttgggtctaagg
tgtgtgcctgtatatggaggttctggtgttgcccaacaaattagtgaactcaagcgtggc
gctgaaatagtagtttgtaccccaggaaggatgattgatatactctgcactagtgcagga
aaaataacaaatctgcgtagagttacatttttggtcatggatgaagctgatagaatgttt
gacatgggttttgaacctcagattactcgcattgttcagaatattcggccagaccgtcaa
accgtactattttctgctacttttcctcgtcaggttgaaattttggctcgcaaggtgttg
aacaaacctgtggaaatacaggttggtgggaggagtgttgtgaataaggacataacacag
ttggttgaagtgaggccagaaaatgaaaggttcttgagactgttagagctattaggagag
tggtatgagaaaggcaagattctaatttttgtccactcacaggagaaatgcgatgcactc
tttagggatctccttaagcatggttatccatgcctctcactccatggggccaaggatcag
acagatcgtgaatctaccatatcagactttaaaagcaatgtatgcaacttgttaattgca
actagcattgctgccaggggtttagatgtcaaggagctggagctagtgatcaattttgat
gtcccaaaccactatgaagattatgtgcatcgtgtgggtcgcacaggccgagctggccga
aaggggtgtgctatcacatttattgctgaggaagattcaagatatgcaccagatcttgtg
aaagcattggaactctctgagcaggttgttcctgatgacctgagagctcttgctgatagt
ttcatggcaaaggtgaatcagggattggagcaggctcatggaactgggtatggtggtagt
ggtttcaagtttaatgaggaagaagatgaagtgaggagggcagcaaagaaagcgcaagcg
aaggaatatggtttcgaggaagacaaatcagattcagaagatgaagatgatggtgtccgg
aaggcaggtggtgatatctcacagcaggcagctttagcccagatagctgccatagcagct
gccactaaagttagtgcagcctcaatcacaactcccatctctgctgctcaactgcttcca
aatggcggattacccgtttctgtgcctggtgttctgggactgacaattccgggaacagtg
gcagttattcctggtgctacattgcctgtggttgctaatgatggagcagctgcaagggca
gcattagcagctgctatgaacttgcaacacaacctggccaagattcaagctagtgccatt
cctgaacactatgaagcggaattggaaattaatgattttccacagaatgctcgatggaag
gtcacccataaggagaccttaggcccaatttcagagtggactggagctgctattactact
agggggcagttcttcccacctggcaagattgctggacctggagagcgcaagctttacttg
ttcattgaaggtcctactgaacaatctgttaagagagctaaagctgaattgaaacgtgtc
cttgaggatattacaaaccaaacattgtcacttcccggtggatcacaaccaggcagatac
tcagtcgtttaa
DBGET
integrated database retrieval system
