Momordica charantia (bitter melon): 111011122 Help Entry 111011122         CDS       T05045                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism mcha  Momordica charantia (bitter melon) Pathway mcha03030   DNA replication mcha03410   Base excision repair mcha03420   Nucleotide excision repair mcha03430   Mismatch repair Brite KEGG Orthology (KO) [BR:mcha00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     111011122    03410 Base excision repair     111011122    03420 Nucleotide excision repair     111011122    03430 Mismatch repair     111011122  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:mcha03032]     111011122    03400 DNA repair and recombination proteins [BR:mcha03400]     111011122 Enzymes [BR:mcha01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      111011122     6.5.1.6  DNA ligase (ATP or NAD+)      111011122     6.5.1.7  DNA ligase (ATP, ADP or GTP)      111011122 DNA replication proteins [BR:mcha03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     111011122  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      111011122 DNA repair and recombination proteins [BR:mcha03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      111011122    NER (nucleotide excision repair)     Other NER factors      111011122    MMR (mismatch excision repair)     Other MMR factors      111011122 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Motif Other DBs NCBI-GeneID:  111011122 NCBI-ProteinID:  XP_022140452 UniProt:  A0A6J1CGY4 LinkDB All DBs Position Unknown AA seq 806 aa AA seqDB search MLSLRSCYYLRPVTIALPHPQFKKLIFFNKTHSFKPILPNFVSAMSSRPSAFDALMSGAR AAAKKKSATSTSSPKKRKALDSLDPSPKPSSSHTLESMLPVESQCGNSILDNPGGSHLGT AENAVDLGETKLGQDNGGSVGTKNGPAGSKTCATSVQERTAKLKSSIPELKKKAKDFNSK NVACWKEGERVPCLFLCLGFDMISEESSRIVITDIVCNMLRTVMDTTPDDLVATVYLLAN KIAPAHEGLELGIGDSSIIKALSEAFGRTEAQVKKQYKELGDLGLVAKASRSSQSMMRKP DALTIAKVFDTFRLIAKESGKDSQEKKKNHIKSLLVAATDCEPLYLIRLLQTKLRIGLAE QTLLAALGQAAVYAEKHSTPPPNIQSPLEEAAKTVKQVYSILPVYDKLVPALLTGGVWNL SKTCNFTPGIPIGPMLAKPTKGVSEILNKFQDLEFTCEYKYDGERAQIHYLENGSVEIYS RNAERNTGKFPDVVLTVSRVKKPSVRSFILDCELVAYDRGKQKILPFQILSTRARKNVAV SDIKVDVCVFAFDLLYLDGQPLIQRELNVRRELLYDSFMEEPGYFQFATAILTNDLEEIQ KFLDASVDESCEGLIIKTLNRDSTYEPSKRSHNWLKLKKDYIDSIGDSLDLVPIAAFHGR GKRTGVYGAFLLACYDNDNEEFQSICKIGTGFSEAMLEERSTSLRSKVITEPKSYYRYGD TINPDVWFEPTEVWEVKAADLTISPVHRAGVGIVDSDKGISLRFPRLVRVRQDKTPEEAS SSEQVADMYNAQKLNHQNNRDDKDDD NT seq 2421 nt NT seq  +upstreamnt  +downstreamnt atgctttcactgcgttcatgttactatctacgccccgttacaatcgcattgcctcatccc caattcaagaaactcattttcttcaacaaaactcattctttcaaacccatcctcccgaat tttgtttccgcaatgtcttctcgtccttcggctttcgatgctctcatgtctggtgctcgg gccgctgccaagaagaagtctgcaacttcaacttcttctcccaagaagcgtaaagcccta gattctttagacccttctccaaaacctagctcctcccacactttggagtcaatgctgcct gttgaatcgcagtgcggcaactcaattttggacaatcctggaggttctcatctgggaacg gccgagaacgcggtggatttgggagaaaccaagttgggtcaagataatggcggcagtgtt ggaaccaagaatgggccggcggggagtaaaacgtgcgcgacaagtgttcaagaaagaact gcgaaattgaagagttctattccagaattgaaaaagaaagccaaggatttcaactcgaaa aatgttgcgtgttggaaagagggcgaacgggtcccctgtttgtttctgtgtctgggcttc gacatgatttctgaggagtctagtaggattgttatcaccgatattgtgtgtaacatgttg aggaccgtcatggataccacacccgacgacttggtggccactgtatatcttttggctaat aagattgctccagcccacgaagggcttgagttggggattggggattcctctattatcaaa gctctttctgaggcttttggaaggacagaggcgcaggttaaaaaacagtacaaggaacta ggagatttaggtcttgttgccaaagcgagccgttcatcgcagtccatgatgcgaaagcct gatgctttaactattgccaaagtatttgacacatttcggctgattgctaaggaatctggc aaggatagtcaagagaagaaaaagaaccatatcaagtcactgcttgttgctgccacagac tgtgaacctttatatctgattagattgctgcagacaaaattgcgaattggacttgctgaa cagactcttttagctgcattaggccaagctgctgtgtatgctgaaaaacactctacgcca ccaccaaacattcaatctcctctagaagaggctgctaagactgtaaagcaagtgtattct atactcccagtttatgataaacttgtccctgcacttcttactggtggtgtgtggaatctt tcaaaaacatgcaactttacaccaggtattccaattggacccatgctagcaaaaccaaca aagggagtgtccgagatcttaaataaattccaggatttggaatttacttgtgaatacaaa tatgatggtgaacgtgcacagatacattacttggaaaatggttcagttgagatatacagt cgaaatgctgaacgaaacactggaaagttccccgatgttgttctaacggtatcaagggta aagaaaccatctgtaagatcgtttattttggattgtgaacttgttgcttatgatcgtgga aaacagaagattctgcctttccagattctgagtactcgagctcgcaagaacgtggccgtg agtgatattaaggttgatgtgtgtgtatttgcctttgatttattatatcttgatggtcaa ccacttattcagagagaacttaatgttcgtcgagagcttctctatgattcatttatggaa gaacctgggtattttcaatttgccaccgcaatattaacaaacgatcttgaggaaatacag aaattccttgatgcatctgttgatgaaagttgtgaaggtttaattatcaaaacattgaat agagattctacttatgagccatccaagaggtcacataactggttaaaactgaagaaggac tacatagacagcataggggattcacttgatctggtaccaattgctgccttccatggccgt gggaagcgtacaggtgtctatggcgcattcctccttgcttgttacgacaatgataatgaa gaatttcaaagcatttgtaagataggaactggkttttctgaagcaatgcttgaggaacgt tctactagtcttcgttctaaagtcattactgaaccgaagtcatattatcggtatggagat acaatcaatccggatgtttggtttgagcctacggaggtttgggaggttaaagcagcagac ttgactattagcccagttcaccgtgcaggagttggcattgtggattctgataagggaatt tctcttcggtttccacgtcttgttcgtgtaaggcaagacaaaactccagaggaagcttca tcatcagagcaggttgccgacatgtataatgctcaaaaactcaaccatcaaaataatcga gatgataaagatgacgactga

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