Momordica charantia (bitter melon): 111016323
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Entry
111016323 CDS
T05045
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcha03009
]
111016323
Enzymes [BR:
mcha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111016323
Ribosome biogenesis [BR:
mcha03009
]
Eukaryotic type
Pre-60S particles
Helicases
111016323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
111016323
NCBI-ProteinID:
XP_022147370
UniProt:
A0A6J1CZZ4
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MGKQDEPFHVSSKAELKRREKQQKKAKSGGFESLGLSPNVFRGIKRKGYRVPTPIQRKTM
PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTK
ELGKFTDLRISLLVGGDSMETQFEELAQSPDIIIATPGRLMHHLSEVDDMSLRTVEYVVF
DEADCLFGMGFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLETK
ISPDLKLVFFTLRQEEKNAALLYLIREHISADQQSLIFVSTKHHVEFLNVLFREEGIEPS
VCYGDMDQDARKIHISRFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRV
GRAARAGRTGTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEDEVLLDKEGVISKIENAIA
SGETVYGRLPQTVIDLASDRIRETIDSSAELISLQKTSSNAFRLYSKTKPLPSKESIRRA
KDLPREGLHPIFKNVLEGGELMALAFSERLKTFRPKQTILEAEGEAAKLRHHQGPSQWAD
VMKRKRAIHEEVINLVHQQRSAKHVEEELPLENISPKDKEKKGPRGLKRRKTASFKDEEF
YISSVPTNHHTEAGLTVKADQGFGSNRLDTAVLDLVADDSSGMQKQKSVYHWDKRGKKYV
KLNNGDRVTASGKVKTESGAKVKANKTGIYKKWKERSHNKISLKGTERNGEAINTAGNQR
FSGNKRKFGPGKNKHSVPNAHVRPEVKNLDQIRKERQKKENRIQHMKNRPSRGKKSGKKG
KRGKAK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcaggacgagccctttcatgtcagttccaaagcggagctgaagcgtagagag
aagcagcagaagaaggccaagtctggaggcttcgagtctttaggcctcagtcccaatgtc
ttcagaggaatcaagcgcaagggctatagagtgcccaccccaattcagaggaaaaccatg
ccgctcatactttccggcgcggatgtggtggccatggcacggacggggtcgggtaaaact
gctgcctttctggtgcctatgttggagcggctaaaacagcacgatcctcagggtggtgtt
agggctctcattttgtctcctaccagggacttggcgcttcagactctcaagttcaccaag
gaacttgggaaattcacggatcttcgaattagtttattggtaggcggtgatagtatggaa
acacagtttgaagaattggctcaaagtcctgatatcataattgccactcctggaaggcta
atgcaccatttgtctgaggttgatgacatgtccttgcgcacggtggaatatgtagttttt
gatgaagctgattgtctctttggcatgggttttgccgagcagttgcataaaatccttgca
caactgagtgaaaatcgtcaaaccttgcttttcagtgcaaccttaccaagtgttcttgca
gagtttgcaaaggctggtcttcgtgatccccagcttgtgcgccttgatttggaaactaag
attagccctgacttaaagcttgttttctttactttgcgtcaagaagagaaaaatgcagca
ttgttgtatttaatcagagagcacattagtgctgatcaacaaagtttgatttttgtatcc
actaagcatcatgtggagtttttaaatgttttgttcagagaggaaggtattgagccgtct
gtatgctatggtgacatggaccaagatgctcgtaagattcatatatcaagatttagagct
agaaaaacaatgttcttaatagtgactgatgtggcagctaggggcattgacatcccattg
cttgataatgttatcaattgggacttccctccaaaacctaaaatctttgtacatcgtgtt
ggacgagctgctagggctggtcgaactggtacagcattttcatttgtaacttctgaagat
ctccctaaccttttagatcttcatctttttctctcaaaacctataagagctgcacctacg
gaagatgaggttttacttgataaggagggagtgatctctaaaatagagaatgcaattgca
agtggagaaactgtatatggacgtctcccacagacagttattgatcttgcttctgataga
attagagaaactattgattcttcagcagaattgatttctctgcagaaaaccagttcgaat
gcctttcgcttgtattcaaagacaaaacctctaccttcaaaagagtctatcagaagggca
aaggacttacctcgagaagggttgcatccaatcttcaaaaatgtattggaaggtggtgaa
ctaatggcattggccttctcagagcgtttaaaaacattcagacccaagcagactatactt
gaagctgaaggagaagctgctaagttaaggcatcatcagggtcctagccaatgggctgat
gtgatgaagagaaagagagctattcatgaggaggtcattaacttagttcatcagcaacgc
tctgctaagcatgtggaggaggaactcccattggaaaacatttctccaaaggataaggag
aagaaaggacctcgaggattaaagagaagaaagacggcaagtttcaaggatgaggagttt
tacataagttcagtaccaacaaatcatcataccgaagcaggactaactgtaaaagctgat
caaggttttgggtctaacaggttggatactgctgttctagatctagtcgcagatgatagt
tctggcatgcagaaacagaaatccgtataccattgggataagcggggtaagaaatatgtg
aagttaaacaatggcgatcgggtcacagccagtggaaaggtaaagacagaaagcggtgca
aaagtaaaagctaacaagaccggcatatacaagaaatggaaagaacgatcacacaataag
atctctctaaaaggaacagaacgaaatggtgaagccataaacactgctggaaatcaacga
ttttcgggaaataaaagaaagtttgggccaggcaagaataagcattcagtgcctaatgct
catgtgcgtccggaagttaaaaacctcgaccaaattcggaaggaacgacagaagaaggaa
aatagaattcagcacatgaagaacagaccatcaaggggtaaaaagtctggtaaaaaagga
aagaggggaaaggcaaagtag
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