Momordica charantia (bitter melon): 111016926
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Entry
111016926 CDS
T05045
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111016926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcha03041
]
111016926
Spliceosome [BR:
mcha03041
]
Common components
Common spliceosomal components
SR proteins
111016926
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111016926
NCBI-ProteinID:
XP_022148198
UniProt:
A0A6J1D3F5
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS
SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS
YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK
SRSRSASPARSRSKSSSLSGSRSRSRSPLPNRGKRTSKSPKRRDASKSPSRSKSRSRSRS
KSKSKSPSG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgtgccagcagaacggtctatgtgggaaatctcccgggtgatattcgtgaa
aaagaagtggaggatttattttacaagtatggacgcatagctcacattgatctcaaggtt
ccaccaagacctcctggttatgcatttgttgagttcgaagatgcagaagatgctcaagat
gctattcgtggtcgtgatggctatgattttgatgggcacaggttacgtgtggaacttgct
catggtggtcgtggtcattcttcatctagtgatcgttatagtagtcatggaggaagccgt
ggtgggcgtggagtatctaggcgctctgattatcgtgtattagtcacaggattaccttct
tccgcctcatggcaagatttaaaggatcacatgcggcgagctggggatgtttgtttctcc
caagtgtttcgtgatggtagtggaactacagggatcgtggactacactaactatgatgac
atgaaatatgcaattaaaaaacttgatgattctgagttccgaaatgcattttctcggtca
tatgttcgtgtgagagaatatgattcaaagagggatctctccaggagccctagtcgtggg
cggtcacactctagagggaggagttatagtcgcagtcgtagtagaggccgtagtaggagc
aagagccgcagtaggagcaagtctccaaaagccaaatcttcccagcggtcacctgttaaa
tcccgatcgaggtctgcttcccctgctcgctcccggtcaaagtcatcatctctttcagga
tctcgatcaagatcaagatctccactgcctaatcgtggcaaacgtactagtaaaagtccc
aaaagacgcgatgctagcaaaagccctagccgaagcaagagcagaagtaggagcaggagc
aagagcaagagcaaaagtccttccggatga
DBGET
integrated database retrieval system
