Momordica charantia (bitter melon): 111024117
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Entry
111024117 CDS
T05045
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111024117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111024117
03036 Chromosome and associated proteins [BR:
mcha03036
]
111024117
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111024117
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111024117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
111024117
NCBI-ProteinID:
XP_022157417
UniProt:
A0A6J1DUF5
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MFGSPNPFGQPSSSPFASQPVFGQTANASNNPFAPKPFGSTSPFGSQTGNTVFGGTSTGV
FGAAQSSSPFSSTTFGGSSSPAFGATPSTFGSSSTPAFGSSSSSSFGAGSSIFGQKPLFG
GFGSTTTQTNPFGSANQQSQPAFGSNVFGSSSPFGAPSQSAFGATSAPAFGATSTPAFGA
TSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGASSTPAFGSTSTPAFGSTGNA
FGSLSTPVFGSGGGFGASSTPAFGVSSTPAFGASSAPAFGASSTPSFSFGSTSAFGQSTS
AFGSSNFGSNTSPFGAQSSPFGAQSTSAFGTSGFGQAGFGGQRGGSRAAAYAPTTEPDPG
SGSTQAAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPLPAGQSTGGVGFGVSNAQPN
LLATSTFSQPSSNPFSTATSSNPFAPKPSGFGTFGPSTTFSFNSSAFATSSSSNLFPSTT
SASTSSFLPTTSSQFGSSSLFNSSNTQALGSQLAFSSTASPGTNLTFPSSLNFSNTQSSS
LFQSTTPSIGQTGSAFGAPFTQSSLFNQPSSGVGGNLFSSSPLLTSSNPMGFGQSSASFS
MPFQPAQAQAPTSFFSNLSQTQPIGSSGFAGTSSIFGQSNFGQSPITQSPVVQPATATNP
FGTLPAMPQMSISKPGAAPSIQYGISSMPVVDKAAPVRISSFLTPRHLSHRRMRLPTRKY
NPKNDGRPRVPFFSEDEETPSTPKADALFIPRENPRALVIRPTDQWPSRASLEKASPLKD
TAVRENGKIPEDNSSLPVNNLKNTDGNAVENGSTSKDSVHPNKVNQKPNGVHEDHSAPKE
DLYRTFGGHRAGEAAIVYEHGADIEALMPKLRHADYYTEPKIQELAAKERAEPGFCRHVK
DFVVGRHGYGSIKFFGETDVRRLDLESIVQFNNREVTVYLDDSKKPPRGQGLNKPAEVTI
LNIKCFDKKTGHQYTEGPKAEKYKELLRKKTEAQGAEFVSHDPVKGEWKFRVEHFSKYKM
EDCEEVEE
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgttcggttctcccaacccttttgggcaaccgtcttctagcccttttgcatcccaacca
gtcttcgggcaaactgccaatgcaagtaataatccttttgctcccaagccatttggaagt
acttccccttttggctcacagacaggaaatacagtgttcggtggtacatcaactggtgtg
tttggggcagcccaatcctcttcccccttttcttccacaacatttggcggttcatcatcg
ccagcttttggtgctacaccgtccacttttggatcatcatcaactcctgcttttggtagt
tcatcatcttcatcatttggagcaggttcgtccatttttgggcagaagcctctatttgga
ggctttggatctactactactcaaacaaacccatttggaagtgcaaaccagcaatctcag
ccagcatttggaagcaatgtctttggttcctcatcaccttttggtgcgcctagccagtcc
gcatttggtgctactagtgctccagcctttggcgccacgagcaccccagcatttggcgcc
acaagcaccccagcatttggcgccacgagcaccccagcatttggcgccacgagcacccca
gcatttggcgccacaagcacccctgcctttggcgccacaagcacccctgcctttggggct
agcagcactcctgccttcggttcaacaagcactcctgcatttggtagtactgggaatgca
tttggctcattaagcacccctgtttttggatctggaggtggatttggtgcctcaagtact
cctgcttttggagtttcaagtactcctgcttttggggcttcaagtgctcctgcttttgga
gcttctagcactccatccttcagctttgggtccacttcagcttttggccagtcaacttct
gcatttggtagcagcaattttggttctaatacatctccttttggagcccagagttcccct
tttggagcacagtctacatctgcatttgggaccagtggttttgggcaggctggttttggt
ggtcagcgtggtggtagtagagcagctgcttatgcaccaacaactgagccagatcctgga
agtggtagtacacaagcagctgggaagttggagtctatatcagccatgcctgtttacaaa
gataagagtcatgaagagttgagatgggaggattatcaattgggagacaaaggtggacct
cttcctgctggtcagtctactggtggtgttggctttggtgtttctaatgcacagccaaac
cttctagctacttcaacatttagtcaaccaagttcaaatcctttttctactgctacatca
tccaatccatttgcccctaagccttctggttttggtacttttgggccttcaacaacgttt
tcatttaattcttcagcatttgctacttcatcttcatcaaacctatttccatcaacaaca
tcagcctcgacatcatcttttctgccgacaacatcctctcaatttggaagctcatcctta
ttcaattcatctaacactcaagcccttggctcacaacttgcttttagttcaactgcatct
ccagggacaaatcttacctttccttccagcttaaattttagtaacacccaatcatcttcc
cttttccaatccacaacaccttcaattgggcagacaggttcagcctttggcgctccattt
acacaatccagcttgtttaatcaaccttcgtctggggttggagggaaccttttctcaagc
tcgccacttctaacttcgagtaatccaatgggttttggtcaatcatctgcctctttttct
atgccttttcaaccggcacaagcacaggctcccacttccttttttagcaacctgagtcag
actcaaccaattggttcaagtggttttgcaggaacttcgagtatttttggtcagagtaac
tttggacaatcgcctatcacccaaagccccgtagtacaaccagcaactgccacaaatcca
tttgggacactccctgcaatgccacagatgtcaattagtaagccaggagcagcaccttca
attcaatatggaatttcaagcatgccggttgttgataaagctgctcctgtcagaatatca
tccttcttgacgcctcgccacctatctcacagacggatgagattgcctacaagaaaatat
aatcctaagaatgatggccgccctagggttccatttttcagtgaagatgaagaaacacca
agcaccccaaaggctgatgctctttttattcccagagagaaccctagagcattggttatt
cgtcccacagatcagtggccttcaagggccagtttagagaaagcatcaccattgaaggac
accgcagtgcgtgaaaatgggaagattcctgaggacaattcctccttgcctgtcaacaat
ttgaagaataccgatggaaatgctgttgagaacggtagtactagcaaggacagcgtccat
cctaacaaagtaaaccaaaaacccaacggggtccatgaggatcattctgctccaaaggag
gacttgtataggacatttggggggcacagagctggcgaagccgccatcgtttatgaacac
ggggcagatatcgaggcattaatgccgaagctccgacatgcagactattataccgagcca
aaaattcaagaattggcagccaaagaacgggctgaacctgggttttgccgtcatgttaag
gattttgtggtgggccgccatggttatggaagcatcaaattctttggcgaaacagatgtg
cgacgacttgatctagagtccattgtccagtttaacaaccgtgaggtgactgtgtacctc
gacgatagtaagaagccccctcgtgggcaaggtctgaataagcctgctgaagtaacaata
ctcaacatcaaatgcttcgacaagaaaaccgggcatcagtatacggaagggccaaaagct
gagaaatacaaggagttgctaaggaagaagacggaggctcaaggcgcggagttcgtatca
cacgatccagtgaagggggagtggaagttcagggtcgaacacttcagcaagtataagatg
gaagactgtgaggaagttgaagagtga
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integrated database retrieval system
