Mesoplasma chauliocola: CK556_02990
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Entry
CK556_02990 CDS
T05062
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mchc
Mesoplasma chauliocola
Pathway
mchc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mchc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CK556_02990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mchc03019
]
CK556_02990
03009 Ribosome biogenesis [BR:
mchc03009
]
CK556_02990
Enzymes [BR:
mchc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CK556_02990
Messenger RNA biogenesis [BR:
mchc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CK556_02990
Ribosome biogenesis [BR:
mchc03009
]
Prokaryotic type
rRNA helicases
CK556_02990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF2608
CMS1
AAA_19
HEM4
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
ASZ09294
UniProt:
A0A249SNP7
LinkDB
All DBs
Position
complement(662016..663878)
Genome browser
AA seq
620 aa
AA seq
DB search
MTFKELQLNSKILTALEKANFNEATEIQARAIPLFLESKNIFGKSSTGTGKTASFVLPIL
QNIDPNKRKVQAIIMAPTRELAMQIVTQIRLFGSRIENIVIAPLIGGADMRDQIKRLRDS
QIVVGTPGRVNDHLNRKTLKLDEVQTIILDEADEMLKMGFKNEIDALFEKISPNVQVGLF
SATTSPKVMQIANDYMKDYEIIEIQNQVEVNANITNTFIFTKGYSKDELLIKVFEKHKPK
RAIIFSNTKNHTDKIADDLKDAGIKAIVINGDKRQSQRSRAIAKFRNSEIDVLVATDVVA
RGIDINGVDFVINYDVSMEDEHFIHRIGRTGRNNTKGDSITFVQSQNVLRQIKGIEKEFN
LTIDEMLISEYGELEKQAGRANSGRNERARGDRRDSGRQREDKRNAGHNDRRGSNRGERK
RTSERLNTSRNNWSSQSWEERILNLSPEEKEIAKKALSLVDDYPGEFSNSVSARENSGGR
DRKKSGRQRDDRRNSGNNDRRDSNRGVKRDSGPRDRRESNKNLSNKYEGKRHSSWDVKTD
YSKQDSDRWERVTGKEKHPELSDRRTNKSSGRRDDKKNDKRSSGRGEWTHSGPKQNKGSG
TRGRRNSSSNSSGKNSRSKW
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaaggaattacaattaaacagtaaaattcttacagctcttgaaaaagctaat
tttaatgaagctacagaaattcaagcaagagcaatacctttatttttagaaagtaaaaac
atatttggtaaatcaagcacaggaactggaaaaacagcttcttttgtattaccaatttta
caaaatatcgatccaaacaaaagaaaagttcaagcaattattatggccccaactagagaa
ttagctatgcaaatagttactcaaattagattatttggttcaagaattgaaaacatagtt
attgcacctttaattggtggagcagatatgagagaccaaattaaaagattaagggactca
caaatagttgttggaactccaggaagagttaatgaccacttaaatagaaaaactttaaaa
ttagatgaagttcaaactattattttagatgaagctgacgaaatgctgaaaatgggattt
aaaaatgaaattgatgcgttatttgaaaaaatatcacctaatgttcaagttggattattt
tcagctacaacttcaccaaaagttatgcaaatagctaatgattatatgaaagactatgaa
attattgaaattcaaaatcaggtagaagtaaatgctaatattacaaacacttttattttt
acaaaaggatatagcaaagacgaattgcttattaaagtttttgaaaagcataagccaaaa
agagcgataattttttcaaatacaaaaaatcacacagataaaattgcagatgatttaaaa
gatgcaggaattaaagctattgttattaatggagataaaagacaatctcaaagatcgcgt
gctattgcaaaatttagaaatagtgagattgatgttctggttgcaactgatgttgttgcc
cgtggaattgatataaatggtgtagattttgttattaattatgatgtttcaatggaagat
gagcattttatccatagaattggaagaacaggtagaaacaatacaaaaggtgattcaata
acttttgttcaaagtcagaatgttttaagacaaatcaagggaattgaaaaagaatttaat
ttaacaattgatgaaatgctaatttcagaatatggagaattagaaaaacaagcaggaaga
gcaaactcaggcagaaatgagcgtgcacgtggagatagaagagattcaggtcgtcaaaga
gaagacaaaagaaatgcaggtcacaatgatagaagaggttcaaatcgtggtgaaagaaaa
agaacaagcgagagattaaatacttcaagaaacaattgatcttcacaatcatgagaagaa
agaattttaaatttatcgcctgaagaaaaagaaattgctaaaaaggctttatctttggtt
gatgactatccaggagaattttcaaattcagtaagtgctagagaaaattcaggtggtaga
gatagaaaaaaatcaggtcgtcaaagagatgacagaagaaattcaggtaataatgataga
agagattcaaatcgtggtgtaaaaagagattcaggtcctagagatagaagagaatcaaac
aaaaatttatctaataaatatgaaggtaaaagacattcttcatgagatgtaaaaacagat
tattctaaacaagactcagatcgttgagaaagagtaacaggaaaagaaaaacatccagag
ttgtctgatagaagaacaaataaatcttcaggtcgtagagatgataaaaaaaatgataag
agaagttcaggtcgtggtgaatgaactcattcaggaccaaaacaaaacaaaggttctggt
acacgtggaagaagaaattcttcaagtaattcatcaggaaaaaacagtagaagtaaatga
taa
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