Melitaea cinxia (Glanville fritillary): 123656563
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Entry
123656563 CDS
T09237
Name
(RefSeq) polyadenylate-binding protein 1-A
KO
K13126
polyadenylate-binding protein
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03015
mRNA surveillance pathway
mcix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123656563
09123 Folding, sorting and degradation
03018 RNA degradation
123656563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcix03019
]
123656563
03041 Spliceosome [BR:
mcix03041
]
123656563
Messenger RNA biogenesis [BR:
mcix03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123656563
mRNA cycle factors
Stress granule specific factors
123656563
Spliceosome [BR:
mcix03041
]
Complex C
Other components
Complex C specific factors
123656563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_7
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
123656563
NCBI-ProteinID:
XP_045448192
EnsemblRapid:
ENSMCXG00005012346
LinkDB
All DBs
Position
1:complement(10117459..10120745)
Genome browser
AA seq
610 aa
AA seq
DB search
MNPGPPNYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPVDAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFS
AFGNILSCKVAQDENGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGRFIPRKER
EKELGEKAKLFTNVYVKNFGDDFSDELLKDMFEKYGRITSHKVMYKDDGSSRGFGFVAFE
DPDAAERACLELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYV
KNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIV
GTKPLYVALAQRKEDRKAHLTSQYMQRMASMRMQQMGQIFQPGSAGGYFVPTIPPAQRFY
GPAQMTQIRPSPRWTAQPSVRPSTQAAASAYPNMQPPFRPAPRGPTQTALRTSLGARPIT
GQQGVAAASTIRAPLVTSGRPAGYKYTANMRNPPAPQPAVHIQGQEPLTATMLAAAPLQE
QKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVLQAH
QAKQQATKKD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctggtccaccaaattatccgatggcatcgctctacgttggagatctgcactcc
gatataaccgaagccatgttgtttgaaaaattttctaccgctggccccgttctttccatt
cgcgtttgcagagatatgataacacgtagatctcttggttacgcttacgtaaattttcaa
cagcctgttgatgcggaacgcgctttagatacaatgaattttgatatgatcaagggtaga
cctattcgaattatgtggtctcaacgtgatccatctctacgcaaatctggtgttggtaat
gtttttattaaaaacctcgataaaaccattgacaataaagctatgtatgatactttctca
gcctttggaaatattttgagctgtaaagtagctcaagatgaaaatggagcatctaaaggg
tatggttttgtccattttgaaactgaagaagctgcgaacaaatcaattgataaagtaaat
ggaatgctgctgaacggcaaaaaagtttatgttggcagatttattcctcgcaaagaacgc
gaaaaggagcttggagaaaaggctaaattatttaccaatgtatatgtcaagaattttggt
gatgatttttctgatgaactcttgaaggatatgtttgagaagtatggccgtataacaagc
cataaagtaatgtataaggatgatggttcctcaagaggctttggttttgtcgcattcgaa
gatccagatgctgcagagagagcttgtttagagctaaatggcaaagagcttgtcgaagga
aaaccactttacgtaggccgtgctcagaaaaaggctgaacgtcaaaaagaactcaaacgt
aaatttgagcaactcaaatctgaacgactaactcgttatcaaggagttaatttatatgtg
aagaacttagatgatactattgatgatgaaagattgcgcaaagaattcgcaccttttgga
accataacttcagcgaaggtaatgttagaagacggtcgcagtaaaggttttgggtttgtg
tgtttctcttcacccgaagaagcaaccaaggcagttacagaaatgaatggtagaattgtt
ggtactaaaccactttatgtagctttggctcaacgtaaagaagatcggaaggctcacctg
acatcgcaatatatgcaacgaatggccagtatgcgtatgcaacaaatgggtcaaattttc
caaccaggtagtgcaggtgggtactttgtacctactattcctcctgctcaaagattttat
ggccctgcgcagatgacacaaatacgtccttcaccaagatggactgcacaaccctctgtt
agacccagtacgcaggctgcagcttctgcttatcctaatatgcaacctccattccgccct
gcaccacgtggaccaactcaaactgcactacgaacttctttaggtgcaagaccaataaca
ggacagcaaggtgttgcagcagcttctacaattcgtgcaccacttgttacaagtggtcgt
ccagcagggtacaaatacactgctaacatgcgaaacccccctgctccacagccagcagta
cacattcaaggacaagaaccattaacagcaacaatgctagcagctgcacctctacaagaa
cagaagcaaatgctaggtgaacgactattcccactgattcagaggatgcatcctgatttg
gcgggtaaaataactggaatgttattggaaattgacaattctgagttgttgcatatgctg
gaacatgcagagtcgcttaaggcaaaggtggatgaggctgttgctgttttgcaagctcac
caagctaaacagcaagccacaaagaaagactaa
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