Melitaea cinxia (Glanville fritillary): 123660340
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Entry
123660340 CDS
T09237
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123660340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcix03041
]
123660340
Enzymes [BR:
mcix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123660340
Spliceosome [BR:
mcix03041
]
Complex A
U2 snRNP components
U2 related factors
123660340
Complex B
123660340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
123660340
NCBI-ProteinID:
XP_045451396
EnsemblRapid:
ENSMCXG00005016726
LinkDB
All DBs
Position
15:11281504..11312328
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AA seq
1001 aa
AA seq
DB search
MVRSGRDRDRDRDRKRSRSRSATPDRKRRRSPSRNRDRSSKSSKRKRSRSRDRDSKRDRS
RDRDRDRDRKSDKRDDKRNGSSSKSRKKSPDREKERERSKSKEKAIKSESSEYNPGTVDK
EEEQSRLEAEMQKRRDRIERWRAERKRKEIESAKKEVQKGSIVTNIQVPAAKKWSLEDDS
GDEGEEGESKEKAIVEEKKEEDEIDPLDAYMQEVQQEVRKVNQIDQARGISVPTTGGTGV
MIVTGTAKKKVSEQKNKGELIEQNQDGLEYSSEEETEDIKDAAANLASKQRKELAKVDHA
SLDYMPFRKSFYTEVSELARMTPEEVEAYRTELEGIRVKGKGCPKPIRTWAHCGISKKEL
DILKKLGFEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHVLDQPPLEDTD
GPISLIMTPTRELCMQIGKDIKKFAKSLGLRVVCVYGGTGISEQIAELKRGAEMIVCTPG
RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMKIIDNVRPDRQTVMFSATFP
RQMEALARRILQKPIEVQVGGRSVVCKEVEQHVAILEEEAKFFKLLELLGLYSQMGSIIV
FVDKQENADSLLKDLMKASYPCMSLHGGIDQFDRDSTIVDFKSGKVKLLVATSVAARGLD
VKQLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAWTFLTPEQGRYAGDVLRAFELAGTP
APPELRQLWETYKEAQEKEGKKVHTGGGFSGKGFKFDESEAQAATERKKYQKAALGLQDS
DDEDVEGDLDQQIETMLAAKKIVKEIKPGAAAAPAGGADGKLELARRLASRINLAKGLGV
EHKGATQQAAEAILKGAPSAHTLITAKTVAEQLAAKLNTRLNYQPRDESTSEPAEEVFRK
YETELEINDFPQQARWRVTSKEALALISEYSEAGITVRGTYVPPGKAPPEGERKLYLAIE
SSQELAVAKAKSEITRLIKEELLKLQTSAHHMINKARYKVL
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggttagaagtgggagagatagggacagagatcgagatcgtaaacgttctcgtagtcga
tcagcgacaccagaccgaaaacgtcggcgttcgccgtctaggaatagagatagaagttct
aaatcttcgaaaaggaagcgcagtcgtagcagggaccgagattcaaagcgagaccgtagc
agggatcgagacagagacagggatcgcaaaagtgataagagagatgacaaaagaaatggt
tcaagtagtaaatcaaggaagaagtctccagacagagaaaaagagagggagagatcaaaa
tcaaaggaaaaggctattaagtctgaatcttcagaatataatcccggtacagttgataag
gaagaagagcaaagtcgcttagaagcggaaatgcaaaagagacgtgaccgcattgaacgg
tggagagcagaacgtaaacgtaaagaaattgaatcagctaaaaaagaagttcaaaaggga
agcattgtcactaatatacaagtgcctgcagcaaagaagtggtctttagaagatgactca
ggtgatgaaggtgaagaaggtgaatccaaagaaaaggccattgttgaagagaaaaaagaa
gaagatgaaattgaccccttagatgcctatatgcaggaagtgcaacaggaggtccgtaaa
gtaaatcaaatagatcaagctcggggtataagtgtaccaactactggaggtacaggcgtc
atgattgtaactggtacagctaagaaaaaagtttccgaacagaaaaataaaggagaactt
attgaacaaaatcaagatggtcttgaatattcatcagaagaggaaacagaggatatcaaa
gatgctgccgcaaaccttgcatctaagcaaagaaaggaacttgccaaagtagaccatgct
agtttagattatatgccgtttagaaaatcattttatactgaggtaagcgaattagctaga
atgacaccagaagaagttgaagcctatcgaacagaattagaagggattagagttaaaggc
aaaggttgtcctaaaccaataaggacctgggctcattgcggtatcagtaaaaaggaatta
gatatattaaagaagttaggctttgagaaaccaacaccgattcaagcacaggccatccct
gctattatgtctggcagagatttaattggaatcgctaagactggttctggtaaaaccctt
gcatttatcttaccaatgttccggcacgttctcgaccaaccgcctctggaagatacggat
ggaccaatatctctcatcatgacgcccactagagagctttgtatgcagataggaaaggac
atcaagaaatttgctaagtcgttaggattaagagtcgtttgtgtgtatggtggaactggg
atttcggaacaaatagcggaattgaaacgcggtgccgagatgatagtctgcacaccggga
cgtatgatagacatgttagcggccaactccgggcgtgtcacgaatttacgaagagttacc
tacattgtcctggatgaggcggacaggatgttcgacatgggtttcgagccccaggtgatg
aagataatcgacaatgtacgtccggaccgccagaccgtgatgttcagtgcgacattcccg
cgacagatggaggcgctcgctcgcaggatattgcagaaacctattgaagttcaggttggt
ggacgcagtgtcgtatgcaaagaggtagaacaacacgtagctattctagaagaggaagcg
aaattcttcaagcttttggaactattgggtctctacagtcagatgggcagtataattgtg
ttcgtggataaacaagaaaacgctgacagtcttttaaaggatctcatgaaggcatcctat
ccttgcatgagtttgcacggtggtattgatcaattcgacagggactcgacaatcgttgac
ttcaagtcgggcaaggtgaagttactggtggctaccagcgtcgcagccaggggattggat
gtaaagcaactggtgctggtcgtcaactatgactgccccaaccactatgaggattatgtt
catagatgtggtagaacgggtcgtgcgggtaataagggctacgcctggaccttcttgacc
ccagagcaaggtcggtacgctggggatgtactgagggccttcgagttggcggggacccct
gcgccgcccgagctgaggcagctgtgggagacgtacaaggaggcccaggagaaggagggc
aagaaggtccatactggaggaggttttagtgggaaaggtttcaaattcgacgaatctgaa
gcccaagcagcgactgaaagaaagaagtaccagaaagcggctctcggtcttcaagattca
gacgatgaagacgtggaaggagacctcgatcagcagatcgaaacgatgctcgccgctaag
aaaattgtcaaagaaattaagccgggcgcggcggcggcgccggcgggcggcgcggacggc
aagctggagctggcgcggcgcctcgcgtcccgcatcaacctggccaaggggctgggcgtg
gagcacaagggcgccacgcagcaggccgccgaggccatcctcaagggcgcgccctccgcg
cacacgctcatcaccgccaaaacagttgcggaacagcttgcagcgaaattaaatacgcgg
ttgaactatcaacctcgagacgaaagcacatcggagccggctgaagaggtgttccgtaaa
tacgagacggaattggagatcaacgacttccctcagcaagcgcgttggcgagttactagc
aaggaggcgttagcgttaatcagtgaatattcagaagcgggtataacagtaagaggtaca
tacgtaccacctggcaaagctccaccagaaggcgagaggaagctctacctggccatcgaa
agttcgcaggagttagctgttgccaaagcgaagtcagaaataacgcgtctcataaaggaa
gaactcctcaaactccagacgtctgcccatcatatgattaacaaagctagatataaggtc
ctgtaa
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