Melitaea cinxia (Glanville fritillary): 123661330
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Entry
123661330 CDS
T09237
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03022
Basal transcription factors
mcix03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123661330
09124 Replication and repair
03420 Nucleotide excision repair
123661330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcix03021
]
123661330
03400 DNA repair and recombination proteins [BR:
mcix03400
]
123661330
Transcription machinery [BR:
mcix03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123661330
DNA repair and recombination proteins [BR:
mcix03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123661330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
123661330
NCBI-ProteinID:
XP_045452249
EnsemblRapid:
ENSMCXG00005021200
LinkDB
All DBs
Position
17:complement(15988867..15997968)
Genome browser
AA seq
475 aa
AA seq
DB search
MSESSKSSKSSSNLNPSPTLQCKDLHEYLKSRSPQFLETLYNYPTICLAVYRELPELARH
FVIRLLFVEQPVPQAVVASWVTQTHAKEQSKACEALSELSVWQEAPIPGGLPGWLLSQSF
KKNLKVALLGGGRPWSMSSSLEPDGKARDISFLDAYALERWECVLHYMVGSAQTEGISAD
AVRILLHAGLMTRDAEDGTAVITRAGFQFLLLSTAKQVWLFLQHYLHTAEKRSLSAAECL
AFLYQLSFSTLGKDYSTEGMSNNMLVFLQHLREFGLVYQRKRKAGRFYPTRLALNITCVK
DGLAPLETASPGYIIVETNYRVYAYTQTSLQVALLGLFTELIYRFPDVVVGVLTRESVRA
ALRGGISAQQIIRYLEQHSHPQMLKSETGGIRTTSVLPPTVVDQIQLWESERNRFTYTEG
IVYNQFLSQAEYAVLREYAARAGFLTWSSERARTLVLTRAAHDDVKRFWKRYSKN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtcttcaaagagttcaaagtcctcgtcaaatttgaacccatcgcctacatta
cagtgtaaagatcttcatgaatatctaaaaagtcggtctccacagttcttagaaacgttg
tacaattatccaacgatatgtttagctgtttaccgagaactaccagaactggcgaggcat
tttgtaatccgactactgtttgtggaacagccagtaccacaggcagtcgtcgcatcgtgg
gtgacacagacacatgctaaagagcaaagcaaagcatgtgaagcgttatcagaactgtca
gtatggcaagaagctcctatacctggtggtctacctggatggttactctctcagtctttt
aagaagaacctcaaagtggctttacttggaggtggtcggccatggagcatgtcatcatca
ctggagccggatggcaaggcacgcgacatatctttcttagacgcgtatgcattggagcgg
tgggagtgtgtgttacactacatggtgggatcagcacagaccgagggtatcagtgcggac
gccgtgcgcatcctgctgcacgcagggctcatgaccagagatgcagaggatggtacagca
gtgataacaagggcaggattccagttccttctcctcagcaccgctaaacaagtgtggctg
ttcctacaacactacctacacacggcagagaagcgaagcctgagcgctgccgagtgcctc
gccttcctttaccagcttagtttcagcacgctcggaaaggattacagtacagagggtatg
agcaacaacatgctggtattcttgcaacatttaagagaatttggtctcgtctaccagagg
aagcgtaaggccggacgcttctacccaacccgccttgctctaaacatcacgtgtgtgaag
gacggcctagcgcctctagagaccgcctcgcccggctacatcatcgtcgagacaaactac
cgcgtgtacgcctacacgcagaccagcctgcaggtggcgctgctgggcctgttcaccgag
ctcatctacaggtttccagatgtggtggtgggcgtgctcacacgggagtcagtccgcgcg
gcgctgcgcggcggcatctcggcgcagcagatcattcgctacctcgagcagcactcgcac
ccgcagatgctgaagtcagagacgggcggcatccgcacgacatcagtactacctcccact
gttgtagaccagatacagctatgggagagtgagagaaaccggttcacatataccgagggc
atcgtttacaatcagtttctgtctcaggcggagtacgccgtgctgcgcgagtacgcggcg
cgcgccggcttcctcacgtggagcagcgagcgcgcgcgcacgctggtgctcacgcgcgcc
gcgcacgacgacgtcaagcgcttctggaagcgctactccaagaactag
DBGET
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