Macrococcoides caseolyticum: MCCL_1775
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Entry
MCCL_1775 CDS
T00848
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mcl
Macrococcoides caseolyticum
Pathway
mcl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCCL_1775 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcl03021
]
MCCL_1775 (rho)
03019 Messenger RNA biogenesis [BR:
mcl03019
]
MCCL_1775 (rho)
Transcription machinery [BR:
mcl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MCCL_1775 (rho)
Messenger RNA biogenesis [BR:
mcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MCCL_1775 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
Mor
AAA
ATPase_2
Myotub-related
AAA_24
Phage-MuB_C
Motif
Other DBs
NCBI-ProteinID:
BAH18482
UniProt:
B9E8G4
LinkDB
All DBs
Position
complement(1911036..1912352)
Genome browser
AA seq
438 aa
AA seq
DB search
MPEKMRTSPQYESFHELYKNHTTKALTQRAKELGIVNYSKLNKKELVLAIMEKQMEKDGN
YYMEGILDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEIKKGDKVTGKVRKPKENEK
YYGLLQVDFVNDQNAEEVKKRPHFQALTPLYPDERIRLETTKTAYSTRIMDLVTPIGFGQ
RGMIVAPPKAGKTSLLKEIANAISVNHPDAKLFILLIGERPEEVTDLERSVEAAEVVHST
FDEPPEHHVKVAELLLERAKRLVEIGENVIILMDSITRLARAYNLVIPPSGRTLSGGLDP
ASLHKPKAFFGAARNIEAGGSLTILSTALVETGSRMDDMIYEEFKGTGNMELMLDRKLAE
KRVYPAIDIRRSSTRKEELLLDKNELDMIWQLRNLFTESPDFTERFLRRLKQSESNEDFF
KQLGERMVESAKTGKPII
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaaaaatgagaacaagtccacaatatgaatcttttcatgaactctataaaaat
cacacaacgaaagctctaacacaacgtgcaaaagaattaggtattgtaaattacagtaaa
ctcaataaaaaggaactcgtgcttgccattatggaaaaacagatggaaaaagacgggaac
tattatatggaaggtatccttgacgatattcagccggacggatatggtttcttgagaacc
gttaactattctaagggtgaaaaggatatttatatcagtgcaagtcagattcgtcgtttt
gaaataaaaaaaggggataaagttactggaaaagtgcgtaaacctaaagaaaatgagaag
tactatggtttattgcaagtagacttcgttaacgatcagaacgctgaagaggttaagaaa
cgtccacatttccaggcattaacgccactctatcctgatgaacgcattcgcctggagaca
actaaaacggcgtactctacgcgtataatggacttggttacacctatcggattcggccag
cgtggaatgattgtagcgccacctaaagcaggtaagacgtcgttgctcaaagaaattgcg
aatgctatttcagttaaccatccagatgcaaaactttttatattattaattggggaacgt
ccagaagaagttacagaccttgaacgttcagttgaagcggccgaagtagtgcattcaacg
tttgacgaacctcctgaacatcatgtgaaagttgctgaattactccttgaacgtgcaaag
cgtcttgttgaaattggtgaaaatgttattattcttatggactctataacacgtcttgcg
cgagcgtataatcttgttattccaccgagcggcagaacgttgtcaggtggtcttgatcct
gcgagccttcataagccgaaagcattcttcggtgcagcgcgtaatatcgaagctggagga
agtttgacgatactatcaacagcacttgtagaaacaggtagccgcatggatgatatgatc
tatgaagaatttaaaggaacgggtaacatggagttgatgctcgatagaaagctagctgaa
aaacgtgtatatccagcaatcgatattcgacgcagttcaacgcgtaaggaagagttgtta
ctcgataaaaatgagcttgatatgatatggcaacttcgtaatttgtttactgagagtccg
gacttcactgaacgtttcttaagacgcttaaaacaaagtgaatctaatgaagatttcttt
aagcaattaggagaacgcatggttgaaagtgcgaagacaggtaagccgatcatataa
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