Mycoplasmopsis columbinasalis: NCTC10184_00219
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Entry
NCTC10184_00219 CDS
T07140
Symbol
holA
Name
(GenBank) DNA-directed DNA polymerase
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mcob
Mycoplasmopsis columbinasalis
Pathway
mcob03030
DNA replication
mcob03430
Mismatch repair
mcob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10184_00219 (holA)
03430 Mismatch repair
NCTC10184_00219 (holA)
03440 Homologous recombination
NCTC10184_00219 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcob03032
]
NCTC10184_00219 (holA)
03400 DNA repair and recombination proteins [BR:
mcob03400
]
NCTC10184_00219 (holA)
Enzymes [BR:
mcob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10184_00219 (holA)
DNA replication proteins [BR:
mcob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10184_00219 (holA)
DNA repair and recombination proteins [BR:
mcob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10184_00219 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
CobU
Motif
Other DBs
NCBI-ProteinID:
VEU78004
UniProt:
A0A449BA01
LinkDB
All DBs
Position
1:302033..302989
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AA seq
318 aa
AA seq
DB search
MYLICGQDTFLIQEKVQELKNHYPDYAVQTFNCETPEAVLSLITEANNQSLFKQHSFFIV
NNLLFFTSKLDKNLEKLADEFLNVLHQSKNDVFVFVNNEITECANIYKNNFTKNSMIKDF
SQHIDIKKLTESQQIKYIIDKVTNLGGNINYSAAQILSLKTTGDLGLINNEINKLLLLKK
TIDYNDVETYVDAVTSEDAFAFVNSFESNNFDLIWVEYQKKKEFVTSVTALIAQISQQLI
ICNQIAGYKKLGKSLDYVANDLKLNVYRVKRVNALLQKLGLRKVRHLLKSLALLDRAIIN
GKVNEWMAFEHFLIVNFL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatctgtgggcaagatactttcttaattcaagaaaaagttcaagaacttaaa
aatcactatcctgattacgcagtccaaacatttaattgcgaaactccggaagctgtttta
tctttaattactgaagccaacaaccaaagtttgtttaaacagcactctttttttattgtt
aataatttgcttttttttacttctaaactagacaagaatttggaaaaactcgcagatgaa
tttttaaatgttttacatcaaagcaaaaatgatgtttttgtttttgtaaataacgaaata
actgaatgtgcgaatatttataaaaataatttcacgaaaaactctatgataaaggatttt
tcgcaacacattgatatcaaaaagttaactgaatcacaacaaattaaatatattattgat
aaagtaactaaccttggcggcaatattaattattctgcagctcaaattttaagtttgaaa
acaactggtgatttaggcttgattaacaatgaaattaacaagttgttactgctaaaaaaa
actatagattataacgatgtcgaaacttatgttgatgctgttacaagcgaagatgctttt
gcttttgtaaattcttttgaaagtaacaattttgatttaatttgagtagaatatcaaaag
aaaaaggaatttgtcacttcagttactgctttaattgcgcaaattagtcaacaattaatt
atttgtaatcaaattgcgggctataaaaaacttggtaagtctttggactatgttgctaat
gacttaaagttaaatgtttatcgagtaaaaagagtaaatgctttgttacaaaaattaggt
ttgcggaaagttagacatttactcaagagtttagctctactcgatcgcgccattataaat
ggtaaagtaaatgaatgaatggcttttgaacactttttgatagtcaattttctttaa
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