Mastomys coucha (southern multimammate mouse): 116076729
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Entry
116076729 CDS
T07224
Symbol
Tcf20
Name
(RefSeq) transcription factor 20 isoform X1
KO
K24769
transcription factor 20
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116076729 (Tcf20)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
116076729 (Tcf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
116076729
NCBI-ProteinID:
XP_031206431
LinkDB
All DBs
Position
Unknown
AA seq
1987 aa
AA seq
DB search
MQSFREQSSYHGNQQSYPQEVHSSSRIEEFSPRQAQMFQNFGGAGGGSSGTGSNSSGRRG
TAAAAAAMASETSGHQGYQGFRKEAGDFYYMAGNKDTVAAGTPQPPQRRPSGPVQSYGPP
QGSSFGNQYASEGHVSQFQAQHSALGGVSHYQQDYTGPFSPGSAQYQQQASSQQQQQQQQ
QQQQQQQQQQQQQQQQQQVQQLRQQLYQSHQPLPQATGQPASGSSHLQPMQRPSTLPSSA
GYQLRVGQFGQHYQSSASSSSSSSFPSPQRFSQSGQSYDGSYSVNAGSQYEGHNVGSNAQ
AYGTQSNYSYQSQSMKNFEQAKIPPGTQQGQQQQQQQQPQPQQQQQQQQQHPPQHVMQYT
NAATKMPLQSQVGQYNQPEVPVRSPMQFHQNFSPISNPSPAASVVQSPSCSSTPSPLMQS
AENLQCGQGSVPMSSRNRILQLMPQLSPTPSMLPSPNSHAAGFKGFGLEGVPEKRLTDPG
LSSLSALSTQVANLPNTVQHMLLSDALTPQKKSSKRPSSSSKKADSCTNSEGSSQPEEQL
KSPMAESLDGGCSSSSEDQGERVRQLSGQSTSSDTTYKCGASEKAGSSPTQGAQNEAPRL
STSPATRDEAASPGAKDTSLSSEGNTKVNEKTVGVIVSREAMTGRVEKSGGQDKGSQEDD
PAASQRPPSNSGVKEISHTSLPQPDPPGGGSKGNKNGDNNSSNHNGEGNGQSSHSAVGLS
FTGRTEPSKSPGSLRYSYKESFGSAVPRNVSGFPQYPSGQEKGDFGSHGERKGRNEKFPS
LLQEVLQGYHHHPDRRYPRSAQEHQGMASSLEGTARPNILVSQTNELASRGLLNKSIGSL
LENPHWGPWERKSSSTAPEMKQINLSDYPIPRKFEIEPPSSAHEPGGSLSERRSVICDIS
PLRQIVRDPGAHSLGHMGTDARIGRNERLNPSLSQSVILPGGLVSMETKLKSQSGQIKEE
DFEQSKSQGSFNKKSGDHCHPTSVKHETYRGNASPGAAAHDSISDYGPQDSRSTPMRRVP
SRVGSRETMRGRSSSQYHDFAEKLKMSPGRSRGPGGDPHHMNPHMAFSERANRSSLHAPF
SPNSESLASAYHTNTRAHAYGDPNTGLNSQLHYKRQMYQQQQEEYKDWASSSAQGVIAAA
QHRQEGPRKSPRQQQFLDRVRSPLKNDKDGMMYGPPVGTYHDPSTQEAGRCLMSSDGLPT
KSMELKHSSQKLQESCWDLSRQTSPAKSSGPPGMSNQKRYGPPHEPDGHGLAESTQSSKP
SNVMLRLPGQEDHSSQNPLIMRRRVRSFISPIPSKRQSQDVKNSNTDDKGRLLHPSKEGA
DKAYNSYSHLSHSQDIKSIPKRDSSKDLPNPDNRNCPAVTLTSPAKTKILPPRKGRGLKL
EAIVQKITSPNIRRSASANSAEAGGDTVTLDDILSLKSGPPEGGTVATQEAEMEKRKGEV
VSDLVSATNQESNVEKPLPGPSEEWRGSGDDKVKTEAHVETASTGKEPSGTMTSTASQKP
GGNQGRPDGSLGGAAPLIFPDSKNVAPVGILAPEANPKAEEKENDTVMISPKQESFPPKG
YFPSGKKKGRPIGSVNKQKKQQQQPPPPPQPPQMPEGSADGEPKPKKQRQRRERRKPGAQ
PRKRKTKQAVPIVEPQEPEIKLKYATQPLDKTDAKNKSFFPYIHVVNKCELGAVCTIINA
EEEEQTKLVRSRKGQRSLTPPPSSTESKVLPASSFMLQGPVVTESSVMGHLVCCLCGKWA
SYRNMGDLFGPFYPQDYAATLPKNPPPKRSTEMQSKVKVRHKSASNGSKTDTEEEEEPQQ
QKEQRSLAAHPRFKRRHRSEDCGGGPRSLSRGLPCKKAATEGSSEKTVSDTKPSVPTTSE
GGPELELQIPELPLDSNEFWVHEGCILWANGIYLVCGRLYGLQEALEIAREMKCSHCQEA
GATLGCYNKGCSFRYHYPCAIDADCLLHEENFSVRCPKHKPPLPCPLPPLQNKTAKGSLS
TEQSERG
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgtttcgggagcagagcagttaccacggaaaccagcagagctacccacaggag
gtgcacagctcatcccgtatagaagagttcagccctcgccaggcccagatgttccagaat
tttgggggagcaggtggtggtagtagtggcactggcagcaacagtagcggacggcgagga
acagctgctgcagcagcagcaatggctagtgagacctctggccatcaaggctatcagggt
ttcaggaaagaagctggagatttttactacatggcaggcaacaaagacaccgtggcagca
ggaaccccacagcctcctcagcgaaggccttctgggcctgtgcagagctatggacctccc
caggggagtagctttggcaatcagtatgcgagtgagggtcatgtgagccaatttcaagca
cagcactctgcccttggtggtgtgtctcattatcagcaggattacacagggcctttctct
cctgggagtgctcagtatcaacagcaggcctctagccaacagcaacagcagcagcagcaa
cagcaacagcaacaacagcaacaacagcagcagcagcagcagcagcagcagcaagtacag
cagttgagacaacagctttaccaatcccatcagcctctgccacaagccactggacagcca
gcctctggctcatcacatctacaaccaatgcagcggccctcgactctgccgtcttctgct
ggttatcagttaagagtaggtcagtttggccagcactaccagtcttctgcttcttcctct
tcctcctcctcctttccttcaccacagcgtttcagtcagtctggacaaagctatgatggc
agttacagtgtgaatgctggatctcagtatgaagggcataatgtgggttctaatgcacag
gcttatggaacacaatcaaattatagctatcaatctcagtctatgaaaaattttgaacag
gcaaagattccaccaggaacccagcaggggcagcagcagcagcagcagcagcaaccacaa
cctcagcagcagcagcagcagcagcagcagcatcccccccagcatgtgatgcagtacaca
aatgctgccaccaagatgcctctgcaaagccaggtggggcagtacaaccagcctgaggtt
cctgtgaggtcccctatgcagttccaccagaacttcagccctatttctaacccttctcca
gctgcatctgtggttcagtctccaagctgtagctctaccccttctcctctcatgcagagt
gctgagaatctccagtgtgggcaaggcagtgtgcccatgagttccagaaaccgaatttta
cagctaatgccccagctcagcccaactccatcaatgctgcctagtcctaattctcatgct
gcaggattcaaagggtttggattagaaggggtgccagaaaagcggctgactgatcctggg
ttgagcagtttgagtgctctgagtactcaagtggccaacctccctaacactgtccagcac
atgttactttctgatgctttgacacctcagaagaagtcgtcgaagaggccctcatcatca
tctaagaaagcagatagctgtacaaactcagaaggctcctcacagcctgaagaacaacta
aagtcccccatggcagagtcattggatggaggttgctctagtagttcagaagatcaaggt
gagagagtgaggcaactaagtggccagagcactagctctgacaccacctataagtgtgga
gcttcagaaaaagctggctcctcaccaacacaaggtgctcagaacgaggcccctaggctc
agtaccagtcctgcaactagggatgaagctgcctctccaggtgctaaggatacatcactg
tcatctgaggggaacacaaaagtcaatgagaagacagttggggtgattgtctcccgagaa
gccatgacaggtcgggtagaaaaatctggtggacaagataaaggctcccaggaggatgat
cctgctgccagtcagagaccacctagcaatagtggtgtaaaggagatcagccacacatcg
cttccacagccagatcctccaggaggagggagcaaaggaaacaagaatggtgataataat
agctctaaccacaatggagaggggaacggccagagtagccactctgcagtaggcctaagt
ttcacaggcaggaccgagcctagcaagtctcctggaagtttgcgctatagttacaaagag
agttttgggtcggctgtaccacggaatgtcagtggctttcctcagtatccttcaggacaa
gaaaagggggattttggcagccatggggagcgaaagggtagaaatgagaagttcccaagt
ctcctacaggaagtgcttcagggctaccaccaccatcctgacagaaggtatcctagaagc
gctcaggaacatcaagggatggctagtagcctggaaggaactgcaaggcccaacatctta
gtcagccaaaccaatgaattagccagcaggggccttctgaacaagagtattggatccctt
ttggaaaatccccactggggaccatgggaaaggaagtcaagcagcacagctcctgaaatg
aaacagatcaatttgtctgactatcccattcccagaaaatttgagatagaacctccatca
tcagcccatgagcctgggggctccctttctgaaaggaggtcagtaatctgtgatatatcc
ccattaagacagattgtcagagacccaggggctcactcattgggacacatgggtactgat
gccagaattgggaggaatgaacgtctcaacccaagtttaagtcagtcagtcattcttcct
ggtgggttggtgtccatggaaacaaaattgaaatcccagagtgggcagataaaagaggaa
gattttgaacaatccaaatctcaaggtagtttcaacaagaaatctggagaccactgccat
cctactagcgtcaaacatgagacttaccgtggcaatgccagtcctggagcagcagcccat
gattccatttcagactatggcccacaagatagcaggtccacaccaatgcggcgggtccct
agtagagttggtagccgggagactatgaggggtcggtcctcttctcagtaccatgacttt
gcagaaaaattgaagatgtctccaggcaggagcagaggcccaggaggagaccctcatcac
atgaacccacatatggccttttcagagagggccaataggagttctttacatgctcctttt
tctcccaactcagaaagcctggcctctgcttaccacacaaacaccagggctcatgcttat
ggggacccaaatactggtttgaattcccagctccattataagaggcagatgtaccaacag
caacaagaggagtataaagattgggccagcagttctgctcagggagtgattgctgctgca
caacataggcaggaagggccacggaagagcccacggcagcagcagtttcttgacagagta
cggagccccctgaaaaatgacaaagatggtatgatgtatggcccaccagtaggaacatac
catgacccaagcactcaggaagctgggcgctgtctcatgtctagtgatggtctgcctacc
aaaagcatggaattgaagcacagctctcagaagttacaagagtcttgttgggatctttct
cggcagacttctccagccaaaagcagtggtcctccaggaatgtctaatcaaaaacggtat
gggccaccccatgaaccagatggacatggactagccgagtctacacagtcatccaaacct
agtaatgtaatgttacggcttccgggtcaagaggatcattcttctcaaaatccattaatc
atgcggaggcgggttcgttcttttatctcccctattcccagtaagagacagtcacaagat
gtaaaaaacagtaatactgatgataaagggcgcctcctccacccatcaaaagaaggtgcc
gataaagcatacaattcctacagccatctttcccacagtcaggatatcaagtctattcct
aagagagattcctccaaggaccttccaaacccagacaatagaaactgtcctgctgttacc
ctgacaagtcctgctaaaaccaaaatactgcccccacggaagggacggggattaaaattg
gaagctatagttcagaagatcacatctccaaatattaggaggagtgcatctgcaaacagt
gctgaagccgggggagacacagtcacactggatgatatactatctctaaagagtggtcct
cctgaaggtgggactgtggctactcaagaggctgagatggaaaagcgaaagggtgaggtg
gtatctgacctagtaagtgcaactaaccaggaatcgaatgttgaaaagcctcttccaggg
ccctctgaagagtggcgtggcagtggggatgacaaagtcaagacagaggcacatgtagaa
acagcttctactggaaaggaaccctctggtactatgacatccacagcttcacagaagcct
ggtggtaaccaagggagaccagatggttccttgggtggggcagcaccactaatctttcct
gactcaaagaatgtagctccagtgggcatattggcccctgaggcaaatcccaaggctgaa
gagaaagagaatgatacagtcatgatttcacccaaacaagaaagtttccccccaaaaggg
tatttcccatcaggaaagaaaaagggaagaccaattggtagtgtgaataagcaaaagaaa
cagcagcagcaaccacctccacctcctcagccccctcagatgccagagggctctgcagat
ggagagccaaagcccaaaaagcagaggcaaaggcgggagagaaggaagcctggggcccag
ccaaggaagcggaaaaccaagcaagcagttcccattgtggagcctcaagaaccagagatc
aagctaaagtatgctacccagccactagacaaaacggatgccaagaacaagtcttttttc
ccttacatccacgtagtaaataagtgtgaacttggagctgtttgtacaatcatcaatgct
gaagaagaagaacagaccaaattggtgaggagcaggaagggtcagagatctctgacccct
ccccccagcagcacagaaagcaaggtgctcccagcttcatcctttatgctgcaggggcct
gtggtaacagaatcttctgttatggggcacttggtttgctgtctctgtggcaagtgggcc
agttaccgtaacatgggtgacctctttggacccttttatccccaagattatgcagccact
cttccgaagaatccacctcctaagaggtccacagaaatgcagagcaaagtcaaggttcgg
cacaaaagtgcttctaatggctctaaaactgacactgaggaggaggaggagccgcagcag
cagaaggagcagaggagcctggctgctcatcctaggttcaagcggcgccaccgctcagaa
gactgtggtggaggtcctcggtccctgtccaggggactcccttgtaaaaaagcagccact
gagggcagcagtgaaaagactgtttcagacacaaagccctctgtacctaccacttcagaa
ggtggtcctgagctggagttacaaattcctgaactacctcttgacagcaacgaattttgg
gtccatgagggttgtattctctgggccaatggaatctacctggtctgtggcaggctctat
ggcctgcaggaagcgctggaaatcgccagagagatgaaatgctcccactgccaggaggct
ggcgctactttgggctgctacaacaaaggctgctccttccgataccattacccatgtgcc
attgacgcagattgtttgctgcatgaggagaatttctcggtgaggtgccctaagcacaag
cctccccttccatgccctctcccccccttgcagaacaagaccgcaaaaggcagcctcagc
acagagcagtcggagcgggggtga
DBGET
integrated database retrieval system
