Mastomys coucha (southern multimammate mouse): 116083337
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Entry
116083337 CDS
T07224
Symbol
Gtf2h2c
Name
(RefSeq) general transcription factor IIH subunit 2-like protein isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03022
Basal transcription factors
mcoc03420
Nucleotide excision repair
mcoc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116083337 (Gtf2h2c)
09124 Replication and repair
03420 Nucleotide excision repair
116083337 (Gtf2h2c)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
116083337 (Gtf2h2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoc03021
]
116083337 (Gtf2h2c)
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116083337 (Gtf2h2c)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116083337 (Gtf2h2c)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116083337 (Gtf2h2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
VWA_3
Motif
Other DBs
NCBI-GeneID:
116083337
NCBI-ProteinID:
XP_031215977
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDETGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKTAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDETHYKELLAHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDNNSTEPGLTLGGYFCPQCRAKYC
ELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEVALEEYKGERFCYGCQGELKDQHVYV
CTVCQNVFCVDCDVFVHDSLHCCPGCIHKIPTPSGVPSLHCQVPGFSAFWSDFNHQVINS
TTF
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagagccagagagaactaagcggtgggaaggaggctatgagagaacctgggaa
attcttaaagaagatgaaactggatcacttaaagctacaatagaagatattctcttcaag
gcaaagaggaaaagagtgtttgagcaccatggacaagttcgacttggaatgatgcgccac
ctatatgtggtggtggatgggtcgagaacaatggaagatcaggatttaaagcccaataga
ctgacgtgtactttaaagttgttggaatactttgtagaagaatattttgatcaaaaccct
atcagtcagattggaataattgttactaagagtaaaagagctgaaaaactgactgaactc
tcaggaaatccaaggaaacatataacatctttgaagaaagctgtagatatgacctgccat
ggagaaccatcactctataattctttaagcatggctatgcaaaccctaaaacacatgcct
ggacatacaagtagagaagtactaatcatcttcagcagccttactacctgtgatccatct
aatatttatgatctcatcaagaccctgaagacagctaaaattagagtgtctgttattgga
ttatctgcggaggttcgagtttgtactgtactcgctcgtgaaactggtggcacataccat
gttatcttagatgaaacccactacaaggagttgttagcacatcatgtgagccctcctcct
gccagctcaagctctgagtgctcactcattcgcatgggattccctcagcataccattgct
tctttgtctgatcaggatgcaaaaccatccttcagcatggcgcatttggataataatagc
actgagccaggacttacattgggaggctatttctgcccacagtgtcgagcaaagtactgt
gagcttcctgttgaatgtaaaatatgtggtcttactttggtgtctgcacctcatttggca
agatcttaccatcatttatttcctttggatgcttttcaagaagttgccctagaagaatat
aaaggagaaaggttttgttatggatgtcagggggaattgaaagaccaacatgtctatgtt
tgcacagtgtgccaaaatgttttttgtgtggactgtgatgtctttgttcatgactctctc
cactgttgtcctggctgtattcataagatcccaactccttcaggagttccttctttacac
tgtcaggtaccagggttctctgccttttggagtgatttcaaccaccaagtcatcaacagt
accacgttctag
DBGET
integrated database retrieval system
