Mastomys coucha (southern multimammate mouse): 116087219
Help
Entry
116087219 CDS
T07224
Symbol
Tcof1
Name
(RefSeq) treacle protein isoform X1
KO
K14562
Treacher Collins syndrome protein
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116087219 (Tcof1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcoc03009
]
116087219 (Tcof1)
Ribosome biogenesis [BR:
mcoc03009
]
Eukaryotic type
90S particles
Other 90S particles
116087219 (Tcof1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Treacle
Motif
Other DBs
NCBI-GeneID:
116087219
NCBI-ProteinID:
XP_031221640
LinkDB
All DBs
Position
Unknown
AA seq
1364 aa
AA seq
DB search
MAEARKRRELLPLIYHHLLQAGYVRAAREVKEQSGQKSFLTQPITLLDIYTHWQQTSELG
QKQKAEDDETLQAKKSRVSDPVSSSESSEEEEEETETETAKATPRQTPVNSGAAALPSNI
KEKAKTKAANKTVNSVLRPASGKTVVHLLSGKSPRKSAEPLANTVLASETEEEGSAQVLG
PTAKPGTVSAGQATSSSEDTSSSSDETDVEVKSSAKPPQGKALAAPAKDPPARTAPGPTK
LGSVTPTPAKPVRAGAAAAAAAAAAEESESSEEDSDSEDEAPAGLPSQVKAPGKGLDVRA
ASASAKGTSGKGPISASPGKSGPIATQVKAGRPEKDTETSSEDDSDSEDEMPVTVTTPQA
KPSGKNPQVKGTSTPAKSSQKGVPAVTPGKAGPVAAQARAGKLEAKSSEESESDSGEAPA
AGTLTRSPAKGKPLGKSPQARPASTVTPGPSEKGANPPRPGKAGSAALKVQTGKEAEDSE
SSSEESDSDGAVSPAKAKLPGKKASPQKVGPVATQVKTDTGKDHSESSEELTDSEEEAAP
AASAAQAKPTLGKQMKTSPRKGTSASATGASASSHSKAGKVTPSASLSSLALAKGTQRTD
VNSSVERESKGAAPSTAGVQGKSGGKGLPGKAALGQGMAPVHTQKTGPSVAPVKAMAQGD
SESSEEESSSEEEDETPAQATPLGRLPQAKASPPPTKAPSASASGKVTAVVASSKGKPPV
STVQNSTVSARGQGSVPAVGKAGATASAAQKGPVAGAGKDSDSSSEESDSEEETPAQIKP
VGKTSQVRAASAPTKESPKKGAHPGPARKTGPPATQAQAGKAEDSESSSDESDSDGEMPS
ATTPAQDGVSQPARSKASGPAPPEKSIEESSESSSEDLPSGQAIKSPPASVNPNRGPAVP
APTPEQVQAVNTTRKAQASGVTAPSSSSESEDEDMIPATQPSTHAIRTNVTTPAALSRTA
PQPSKREQSSRMPKGKKPKTASTQISGTMETLPVTPPQSIPVQPKATNKLGKPKLPEKPQ
LTPGYPKTPRSSEDSSDTSSESEEDAKKPKMSKSAPRLDPDPSQKETVVEETPTESSEDE
MVAPSQSLLSGYMTPSLTVANSQPSKATPRPDSNPLASPAPANKDNPDGKQKSKSQHSAD
TAFPKTGKKEASSGPAPQKPKKPKKSTLSSPAPAQTLPNSITQRLLEQAWPLSEAQVQAS
VVKILTDLLEQERQKATEAIKESGKKGQKRKLSGDLEAGAPKNKSKKKKQQQVPGVDAVS
PEKTPRTSKAKSKLDKGSAGGKGKGSPGPQGAKEKPEGELLEIKLESGEQSDPKSKKEKK
KSGKKKKDKEKKEKKKGKKTPVKDPASPVQKKKKKKKKTAEAAV
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggccaggaagcggcgggagctgcttcccctcatttaccatcatctgttgcaa
gcaggctacgtccgcgcggcgcgggaagtaaaggagcagagcggccagaagagtttcctg
actcagcccatcaccctcctggacatctatacacactggcaacagacctcagagcttggc
cagaagcagaaggcagaagatgacgagacacttcaggctaagaagtctcgagtgtcagac
cctgttagcagctcagagagctcggaggaggaggaagaggagacagaaacggaaactgcc
aaagccaccccaagacagacacctgtcaattctggagccgcagctttgccatcaaacata
aaagaaaaggcaaagaccaaggcagccaacaagactgtgaactctgtgctgcgccctgcg
tctggaaagacggtagtgcacctgctctccgggaagtcacccaggaagtcagcagagccc
ttggcaaacactgtcttagcctcagaaactgaggaggagggcagtgcccaagtcctcgga
cccactgccaagcctggaacggtgtcagcgggccaggccaccagttccagtgaagatacc
tccagctcaagtgatgaaactgatgtagaggtgaaatcctccgctaaaccaccccagggc
aaagctttagcagcccctgccaaggatcctccagcaagaacagccccaggccctaccaag
ttagggagtgtgacgcccacacctgctaaaccagtaagggctggagcagcggcagcggca
gcggcagcagcagcagaagagtctgagagcagtgaggaggactcagacagtgaggatgag
gcccctgctggtctgcctagccaggtaaaggcccctggaaaaggtctcgatgtcagagcc
gcctcagcgtctgccaaggggacctctgggaaaggacccatctcagcaagcccagggaag
tctgggcccatagccacacaggtcaaggcaggaaggccagagaaggatacggaaaccagc
agtgaggacgattctgacagtgaggatgagatgccagtcactgtgaccactcctcaggca
aagccttccgggaaaaaccctcaggtcaaaggaacctcaacccctgccaaatcgtcccag
aaaggggttcctgcagtcactcctggaaaggcagggcctgtggcagcccaggcccgggca
gggaagctggaggccaagagcagcgaggagtcagaaagtgacagtggggaggcaccagca
gctggcactctgactaggagtcctgccaaggggaaacctttggggaaaagcccacaagcc
agacctgcttccactgtaactccggggccatcggaaaaaggtgccaacccacctcgccct
gggaaggcggggtcagcagctctcaaggtccaaacgggaaaggaagccgaggactcagag
agcagcagtgaggagtcggacagtgatggggctgtgagcccagccaaggcaaagctcccg
ggaaaaaaggcctcccctcagaaggtggggcctgtggccacccaggtcaagactgacacg
ggcaaagaccactcagagagcagtgaggagttgactgacagtgaagaggaggcagcacca
gcagcctccgctgctcaggccaaaccaactctgggaaagcagatgaaaacttcccctagg
aaaggcacctctgcgtccgctacaggagcgagtgcctcctcccattctaaggcaggaaaa
gtgactccttcagccagcctgtcatccctagctctggccaagggcacccagaggacagat
gtgaactcttctgttgagcgggagtcaaaaggagctgctcccagcactgctggggtacag
gggaagtctggggggaagggcctcccagggaaagctgccttgggacaagggatggcccca
gtacacactcagaagacaggaccttccgttgccccggtcaaagctatggctcagggagac
tcagagagcagcgaggaagaatccagcagcgaggaagaggatgagaccccagcacaggcc
acacccttggggagacttcctcaggccaaagccagcccacctcccactaaggcaccttca
gcgtctgcatctggaaaagtgaccgctgtggttgcttcatccaaggggaagccacctgta
agcaccgtgcagaacagcaccgtctctgcaaggggccaggggtctgtgccagccgtggga
aaagcaggggcgacggcaagcgcagcacagaaggggcccgtggctggcgcggggaaggac
tcagacagcagtagtgaagagtctgacagtgaagaagagacgccagcccagataaaacct
gtggggaagacctctcaggtcagagctgcctcagcccctaccaaggaatctcctaaaaaa
ggagcccatccaggacccgccaggaagacagggcctccagctactcaggcccaggcaggg
aaggcagaggactcagagagcagtagtgacgaatctgacagcgacggagagatgccatca
gccaccaccccagcccaggatggtgtctcccaacctgccagaagcaaagcctcaggtccg
gcacccccagagaagagcatagaagagtcctcagagagcagcagtgaggatctgccatct
ggccaggcgattaaatcccctccagcttctgtcaaccctaaccgtggcccagctgtccca
gctcctaccccagaacaagtccaggctgtgaacaccacaaggaaggcccaggcctcaggc
gtcactgccccgagctcctcctctgagagtgaggacgaggacatgattcctgccacacaa
ccctccacccatgccatcagaaccaatgtgacaacacctgcagccctctcacgaacagcc
ccccaacccagcaagcgtgagcaatctagtcggatgccaaaaggcaagaaaccaaagaca
gcatccactcagattagcggcaccatggaaacactccccgtgacacctccccagagcata
cctgtccagcccaaagctaccaacaagctcgggaaacccaaacttcctgagaagccgcag
cttaccccagggtaccccaagacccccaggagctcggaggacagcagtgacacgtcttca
gagagcgaggaggatgccaagaaacccaagatgtccaagtcagcccccaggctggatcca
gacccttcccagaaggaaactgtggtagaggagacccctacagaatccagtgaagatgag
atggtggcgccctcacaatctctcctctcaggttacatgactcccagtttgactgtggct
aattcccagccttcaaaagctactcctaggccagactccaaccccttggcttcccctgcc
ccagccaacaaagataacccagatggcaagcagaaatcaaaatcccaacactcggcggac
accgcgttccctaaaacaggtaagaaagaggcctcctcaggccccgcgcctcagaagccc
aagaaacccaagaagagcaccttgagctctccagcccccgcacagacactgccgaacagc
atcacccagcgcctcctggagcaggcctggcctctgagcgaggcccaggtgcaggcctct
gtggtgaagatcctaacagatctgctggagcaggaacggcagaaggccacagaggccatc
aaggagagtgggaagaagggccagaagcggaagttatcaggggacctagaagccggggcc
ccaaagaacaagagcaagaagaagaagcagcagcaggtgcctggggtagatgctgtttcc
ccagaaaagacccccagaacttccaaggcaaaatcaaagctagacaaagggagtgctgga
ggcaaggggaaggggtctcctggcccccaaggagccaaggagaagcccgaaggcgagctg
ctggagataaagcttgagagcggagagcagagcgacccaaagagcaagaaggaaaagaag
aaatccggcaaaaaaaagaaagacaaggagaaaaaggaaaagaagaaaggaaaaaagacc
ccggtcaaagaccctgcctcaccagtccagaagaagaaaaagaagaagaagaagacagcc
gaggctgccgtgtga
DBGET
integrated database retrieval system
