Mastomys coucha (southern multimammate mouse): 116091282
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Entry
116091282 CDS
T07224
Symbol
Samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03250
Viral life cycle - HIV-1
mcoc04623
Cytosolic DNA-sensing pathway
mcoc05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116091282 (Samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
116091282 (Samhd1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
116091282 (Samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116091282 (Samhd1)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116091282 (Samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
SAM_Ste50p
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
116091282
NCBI-ProteinID:
XP_031228397
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MQRADQELPAKRPRSDGSPRTPTSTRPAAADQSADADSESSDLRTWDLEDVCSFLEKCGF
REKKVLDNFRENKITGSFLPFLDEDRLENLGVSSLEERKKMIECIQQLSQSRVDLMKVFN
DPIHGHIEFHPLLIRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLV
RALAEKQPELQISERDMLCVQIAGLCHDLGHGPFSHMFDGRFIPLACPDKKWRHEKGSVD
MFEHLVNSNELKPVMRNYGLIPEEDITFIKELIKGPPETPVKEGSWEYKGRPATKSFLYE
IVANKRTGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARICEVEYKSKTGVRKVKHICT
REKEVGNLYDMFHTRNCLHRRAYQHKIGNLIDIMITEALLKADPYVEITGSAGKKFHIST
AIEDMEAFTKLTDNILLQILYSADPRLSEAQSILRNIECRNLYKYLGETQPKGEKIRKDE
YEQLSQGVANAKPEKAPDVELKAEDFIVDVITMDYGMEDKNPIDYVYFYCKSNSRQAVTI
TKDQVSQLLPEKFAEQLIRVYYKKKDRKSLYAALQHFNQWCALRDFTKPQDGDIIAPLIT
PLKWNKKTSSCIQEVSKVKTCLKF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcagagagccgaccaggagcttcccgctaagcggccccgctccgatggcagcccaagg
acgccaacgagcactcgtcctgcagcagcggaccagtctgcagatgccgactccgaaagc
agcgacctccgaacctgggatctggaggacgtgtgctccttcttagagaaatgtggtttc
cgagagaagaaagtgctggacaacttcagagaaaataaaatcactggttcgtttctgccc
tttttggatgaggatcgtcttgaaaatctgggagtaagttccttggaggagaggaagaag
atgatagaatgtatccaacagctgagtcagtctcgggttgatctaatgaaggtctttaat
gatcctattcatggccatattgagttccaccctctgcttatccggatcatcgacacacct
cagttccagcggcttcgctacatcaagcagctgggaggtggctactacgttttccctgga
gcatcacacaatcggttcgagcacagccttggcgtggggtacctagcaggctgcctcgtg
cgagcgcttgccgaaaaacagccagagctgcagatcagtgagcgagatatgctctgtgtt
cagattgccgggctctgccatgacctaggtcatgggccattttctcatatgtttgatgga
agatttatcccacttgcttgcccagacaaaaagtggaggcatgaaaagggctcagttgat
atgtttgagcatctggttaattctaatgaactcaaacctgtcatgagaaactatggtctc
atccctgaagaagacatcacgtttatcaaggagctaattaaggggccacctgaaacacca
gtcaaagaaggttcgtgggagtataaaggacgccctgccacgaagagcttcctttatgag
atagtggctaacaaaagaactggcatcgatgtggacaaatgggattattttgccagagac
tgtcaccatcttggaatccaaaataattttgattacaagcgcttcattaagtttgcccgt
atctgtgaagtagagtacaagagcaagacaggtgtccgtaaggtgaagcacatttgtaca
agagaaaaggaggttggaaatctgtacgacatgttccacacacgcaactgcttacatcgc
agagcttatcaacacaaaatcggtaacctcatcgacataatgattacagaagctctcctc
aaagcagacccctacgtggagattacagggagtgccgggaagaagttccatatttccaca
gccatcgaagacatggaagccttcactaagctgacggataacattcttctccagatttta
tactctgcggacccacggttgtctgaggcccaaagtattttaaggaacattgaatgccgc
aatctatacaagtatttgggtgagacccagccgaagggtgagaagattaggaaggatgaa
tatgaacagctttcccaaggcgttgctaacgccaaacctgaaaaagccccagatgttgaa
ctgaaggctgaagatttcatagttgatgttatcactatggattacgggatggaagacaag
aatccaattgattatgtttacttctattgtaagagcaacagcaggcaagcggtcacaatc
actaaagatcaggtatcacaactgctgccagagaaatttgcagagcagctcattcgagtg
tactataagaagaaagacaggaagagcctgtacgctgcactgcagcacttcaatcagtgg
tgtgccctcagggacttcaccaagccacaggatggtgacattatagctccactcataaca
cctctgaaatggaataaaaagacttcatcgtgcatccaagaagtttccaaagtaaaaacg
tgcctaaaattttaa
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integrated database retrieval system
